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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TRAF2-DENND1C (FusionGDB2 ID:93646) |
Fusion Gene Summary for TRAF2-DENND1C |
Fusion gene summary |
Fusion gene information | Fusion gene name: TRAF2-DENND1C | Fusion gene ID: 93646 | Hgene | Tgene | Gene symbol | TRAF2 | DENND1C | Gene ID | 10010 | 79958 |
Gene name | TRAF family member associated NFKB activator | DENN domain containing 1C | |
Synonyms | I-TRAF|ITRAF|TRAF2 | FAM31C | |
Cytomap | 2q24.2 | 19p13.3 | |
Type of gene | protein-coding | protein-coding | |
Description | TRAF family member-associated NF-kappa-B activatorTRAF-interacting protein | DENN domain-containing protein 1CDENN/MADD domain containing 1Cconnecdenn 3family with sequence similarity 31, member C | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | TNIK | Q8IV53 | |
Ensembl transtripts involved in fusion gene | ENST00000247668, ENST00000359662, ENST00000536468, ENST00000482854, | ENST00000591030, ENST00000381480, ENST00000543576, | |
Fusion gene scores | * DoF score | 7 X 6 X 6=252 | 4 X 4 X 2=32 |
# samples | 7 | 4 | |
** MAII score | log2(7/252*10)=-1.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: TRAF2 [Title/Abstract] AND DENND1C [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TRAF2(139818424)-DENND1C(6475907), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across TRAF2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across DENND1C (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS5.0 | N/A | BI031313 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
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Fusion Gene ORF analysis for TRAF2-DENND1C |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000247668 | ENST00000591030 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
5CDS-intron | ENST00000359662 | ENST00000591030 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
5CDS-intron | ENST00000536468 | ENST00000591030 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
In-frame | ENST00000247668 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
In-frame | ENST00000247668 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
In-frame | ENST00000359662 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
In-frame | ENST00000359662 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
In-frame | ENST00000536468 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
In-frame | ENST00000536468 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
intron-3CDS | ENST00000482854 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
intron-3CDS | ENST00000482854 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
intron-intron | ENST00000482854 | ENST00000591030 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000536468 | TRAF2 | chr9 | 139818424 | - | ENST00000381480 | DENND1C | chr19 | 6475907 | + | 3323 | 1339 | 149 | 1474 | 441 |
ENST00000536468 | TRAF2 | chr9 | 139818424 | - | ENST00000543576 | DENND1C | chr19 | 6475907 | + | 3032 | 1339 | 149 | 1474 | 441 |
ENST00000247668 | TRAF2 | chr9 | 139818424 | - | ENST00000381480 | DENND1C | chr19 | 6475907 | + | 3202 | 1218 | 28 | 1353 | 441 |
ENST00000247668 | TRAF2 | chr9 | 139818424 | - | ENST00000543576 | DENND1C | chr19 | 6475907 | + | 2911 | 1218 | 28 | 1353 | 441 |
ENST00000359662 | TRAF2 | chr9 | 139818424 | - | ENST00000381480 | DENND1C | chr19 | 6475907 | + | 3351 | 1367 | 21 | 1502 | 493 |
ENST00000359662 | TRAF2 | chr9 | 139818424 | - | ENST00000543576 | DENND1C | chr19 | 6475907 | + | 3060 | 1367 | 21 | 1502 | 493 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000536468 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + | 0.11176607 | 0.8882339 |
ENST00000536468 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + | 0.12040058 | 0.87959945 |
ENST00000247668 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + | 0.104660876 | 0.89533913 |
ENST00000247668 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + | 0.116864674 | 0.8831354 |
ENST00000359662 | ENST00000381480 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + | 0.13064066 | 0.8693593 |
ENST00000359662 | ENST00000543576 | TRAF2 | chr9 | 139818424 | - | DENND1C | chr19 | 6475907 | + | 0.14418189 | 0.85581815 |
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Fusion Genomic Features for TRAF2-DENND1C |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TRAF2-DENND1C |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:139818424/chr19:6475907) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
TRAF2 | DENND1C |
1360 | FUNCTION: Guanine nucleotide exchange factor (GEF) which may activate RAB8A, RAB13 and RAB35. Promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form. {ECO:0000269|PubMed:20154091, ECO:0000269|PubMed:20937701}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000381480 | 0 | 23 | 13_157 | 0 | 802.0 | Domain | uDENN | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000381480 | 0 | 23 | 182_318 | 0 | 802.0 | Domain | cDENN | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000381480 | 0 | 23 | 320_398 | 0 | 802.0 | Domain | dDENN | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000543576 | 0 | 21 | 13_157 | 0 | 758.0 | Domain | uDENN | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000543576 | 0 | 21 | 182_318 | 0 | 758.0 | Domain | cDENN | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000543576 | 0 | 21 | 320_398 | 0 | 758.0 | Domain | dDENN | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000381480 | 0 | 23 | 401_405 | 0 | 802.0 | Motif | FXDXF motif | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000381480 | 0 | 23 | 558_567 | 0 | 802.0 | Motif | Clathrin box | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000543576 | 0 | 21 | 401_405 | 0 | 758.0 | Motif | FXDXF motif | |
Tgene | DENND1C | chr9:139818424 | chr19:6475907 | ENST00000543576 | 0 | 21 | 558_567 | 0 | 758.0 | Motif | Clathrin box |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000247668 | - | 1 | 11 | 299_348 | 0 | 502.0 | Coiled coil | Ontology_term=ECO:0000269 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000359662 | - | 1 | 11 | 299_348 | 0 | 554.0 | Coiled coil | Ontology_term=ECO:0000269 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000536468 | - | 1 | 12 | 299_348 | 0 | 502.0 | Coiled coil | Ontology_term=ECO:0000269 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000247668 | - | 1 | 11 | 351_496 | 0 | 502.0 | Domain | MATH |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000359662 | - | 1 | 11 | 351_496 | 0 | 554.0 | Domain | MATH |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000536468 | - | 1 | 12 | 351_496 | 0 | 502.0 | Domain | MATH |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000247668 | - | 1 | 11 | 124_180 | 0 | 502.0 | Zinc finger | TRAF-type 1 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000247668 | - | 1 | 11 | 177_233 | 0 | 502.0 | Zinc finger | TRAF-type 2 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000247668 | - | 1 | 11 | 34_73 | 0 | 502.0 | Zinc finger | RING-type |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000359662 | - | 1 | 11 | 124_180 | 0 | 554.0 | Zinc finger | TRAF-type 1 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000359662 | - | 1 | 11 | 177_233 | 0 | 554.0 | Zinc finger | TRAF-type 2 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000359662 | - | 1 | 11 | 34_73 | 0 | 554.0 | Zinc finger | RING-type |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000536468 | - | 1 | 12 | 124_180 | 0 | 502.0 | Zinc finger | TRAF-type 1 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000536468 | - | 1 | 12 | 177_233 | 0 | 502.0 | Zinc finger | TRAF-type 2 |
Hgene | TRAF2 | chr9:139818424 | chr19:6475907 | ENST00000536468 | - | 1 | 12 | 34_73 | 0 | 502.0 | Zinc finger | RING-type |
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Fusion Gene Sequence for TRAF2-DENND1C |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>93646_93646_1_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000247668_DENND1C_chr19_6475907_ENST00000381480_length(transcript)=3202nt_BP=1218nt TTCCGGGCGCGCTGCGACCGTTGGGGCTTTGTTCGCGGGGGTCACAGCTCTCATGGCTGCAGCTAGCGTGACCCCCCCTGGCTCCCTGGA GTTGCTACAGCCCGGCTTCTCCAAGACCCTCCTGGGGACCAAGCTGGAAGCCAAGTACCTGTGCTCCGCCTGCAGAAACGTCCTCCGCAG GCCCTTCCAGGCGCAGTGTGGCCACCGGTACTGCTCCTTCTGCCTGGCCAGCATCCTCAGCTCTGGGCCTCAGAACTGTGCTGCCTGTGT TCACGAGGGCATATATGAAGAAGGCATTTCTATTTTAGAAAGCAGTTCGGCCTTCCCAGATAATGCTGCCCGCAGGGAGGTGGAGAGCCT GCCGGCCGTCTGTCCCAGTGATGGATGCACCTGGAAGGGGACCCTGAAAGAATACGAGAGCTGCCACGAAGGCCGCTGCCCGCTCATGCT GACCGAATGTCCCGCGTGCAAAGGCCTGGTCCGCCTTGGTGAAAAGGAGCGCCACCTGGAGCACGAGTGCCCGGAGAGAAGCCTGAGCTG CCGGCATTGCCGGGCACCCTGCTGCGGAGCAGACGTGAAGGCGCACCACGAGGTCTGCCCCAAGTTCCCCTTAACTTGTGACGGCTGCGG CAAGAAGAAGATCCCCCGGGAGAAGTTTCAGGACCACGTCAAGACTTGTGGCAAGTGTCGAGTCCCTTGCAGATTCCACGCCATCGGCTG CCTCGAGACGGTAGAGGGTGAGAAACAGCAGGAGCACGAGGTGCAGTGGCTGCGGGAGCACCTGGCCATGCTACTGAGCTCGGTGCTGGA GGCAAAGCCCCTCTTGGGAGACCAGAGCCACGCGGGGTCAGAGCTCCTGCAGAGGTGCGAGAGCCTGGAGAAGAAGACGGCCACTTTTGA GAACATTGTCTGCGTCCTGAACCGGGAGGTGGAGAGGGTGGCCATGACTGCCGAGGCCTGCAGCCGGCAGCACCGGCTGGACCAAGACAA GATTGAAGCCCTGAGTAGCAAGGTGCAGCAGCTGGAGAGGAGCATTGGCCTCAAGGACCTGGCGATGGCTGACTTGGAGCAGAAGGTCTT GGAGATGGAGGCATCCACCTACGATGGGGTCTTCATCTGGAAGATCTCAGACTTCGCCAGGAAGCGCCAGGAAGCTGTGGCTGGCCGCAT ACCCGCCATCTTCTCCCCAGCCTGCTGCGGTGGCCCTTCAACCAGAAGCCCAACATACCAAGATGGCAACCAGACGATAAGAAACTACCA GAGCCGGAGCCCCAGCCCCTTTCCCTGCCATCCCTGCAAAATGCCTCGTCTTTGGATGCCACCAGCTCTTCAAAGGACTCCAGGTCCCAG CTGATACCCTCAGAGTCCGACCAAGAAGTCACGTCTCCATCCCAGTCCTCAACAGCTTCTGCAGACCCAAGCATCTGGGGGGACCCCAAA CCCTCTCCTCTCACAGAGCCCCTAATTCTTCATCTCACCCCTTCCCACAAGGCAGCTGAAGATTCTACAGCCCAGGAAAACCCCACTCCC TGGCTCTCCACTGCACCCACTGAGCCCAGCCCTCCAGAAAGCCCCCAAATTCTGGCCCCCACAAAGCCCAACTTTGATATAGCCTGGACG TCCCAGCCCCTTGATCCTTCCTCAGACCCCAGTTCTCTGGAGGACCCCAGAGCCCGGCCTCCCAAAGCCCTGCTGGCAGAGCGCGCTCAC CTCCAGCCACGGGAGGAACCAGGAGCCCTGAATTCCCCTGCTACACCCACCAGCAACTGTCAAAAGTCCCAGCCCAGCAGCCGGCCCAGA GTCGCTGATCTTAAGAAGTGCTTTGAGGGTTAAGAATCAGGGGTCCAAGAGAGACCCCAGTCCCTCAATAAAGCCACAAGAGCCCAAAAA AGCTGGTTTTTTTCCTGGTGAATTTCTCTGGTGCCCTCACTCTGCTCGGAAATCCATCCCACCCACCTCTGTCCCTCCAAGGGCAGCCTC TCTAACTGGCTCCTAGCAGGGAATTCCAGGAAGCCTCCTGGTCTTCTAGAATCCTGGCAACCTTACAATTCCTCTCGGCATTTGTCACTT CCATCTCAGCTAATGCACCCACCAGCTCAAACACACCAATAAAGCTTTTGTTACATCTCAGACACCCCCACTGAGCCCTGAGGATGAGGG GTGCCCGTGGGCAGAAGAAGCTCTGGACAGCAGCTTCTTGGGGTCTGGAGAAGAACTGGATTTGTTGAGCGAGATTCTGGACAGTCTTAG CATGGGAGCCAAGAGCGCAGGCAGCCTGAGACCGAGCCAGAGTTTAGACTGCTGTCACAGAGGAGACCTGGACAGCTGCTTCAGCCTGAA CCGGCCCCTTCGCCCCAGCAGGAGACGCCAGCTGGAAGAGGGAACTTCCGAGCCCCCAGGGGCGGGGATGGGGACTCTGTCCTGCAGAGG GGGGGCTCTCTGAGGGCCCCAGCCCTCCCCAGCCGCTCAGACCGCCTGCAGCAACGCCTCCCAATCACTCAGCACTTTGGAAAGGCCAAG AGTGGCTTGAAGGGGGTGCAGAGCCTTCTAATGTATAAGAAAGGTGGTGGCGCCCTCCTGCACTCAGTCAAGGCCAAGACCCAACCAGCC GTCAAGAACATGTACCGCTCGGGGCCCTTCGATCCTATCAGCTCTGGGCCGACAATCTAAAGTTCATCGAAGCCCGGCTGGAGAAGCTCA ACAAGGGGGAGGGCTTCTCAGATCAATTCGAGCAGGAGATCACTGGCTGCGGGGCCTCCTCAGGGCCAGCCAGTGACCTTCAGTGAGGAA GTCTTCTTGGCCCAGAAGCCTGGGGCACCTCTGCAGGCCTTCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGGTGTCCCTGCTG AGGCTCCGGCTCAGGAAGGTCGCCCTGGCCCCCGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGGGGGTAC CGCGACGCACTCGTCTGCAGCCCGAGAGTACGAGAAAAAGCCCTGGAGGACGTCGTGGTGCTGAACGTGGACGCCAATACCTTGGAGACG ACCTTTAACGACGTGCAGGCGCTGCCTCCAGACGTGCGCGCCCATGCCCTACCTCATTGGAGTGCACGCCAGTCTCGCCGAGCATGCGCT >93646_93646_1_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000247668_DENND1C_chr19_6475907_ENST00000381480_length(amino acids)=441AA_BP=391 MFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGI SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCG ADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQS HAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDG -------------------------------------------------------------- >93646_93646_2_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000247668_DENND1C_chr19_6475907_ENST00000543576_length(transcript)=2911nt_BP=1218nt TTCCGGGCGCGCTGCGACCGTTGGGGCTTTGTTCGCGGGGGTCACAGCTCTCATGGCTGCAGCTAGCGTGACCCCCCCTGGCTCCCTGGA GTTGCTACAGCCCGGCTTCTCCAAGACCCTCCTGGGGACCAAGCTGGAAGCCAAGTACCTGTGCTCCGCCTGCAGAAACGTCCTCCGCAG GCCCTTCCAGGCGCAGTGTGGCCACCGGTACTGCTCCTTCTGCCTGGCCAGCATCCTCAGCTCTGGGCCTCAGAACTGTGCTGCCTGTGT TCACGAGGGCATATATGAAGAAGGCATTTCTATTTTAGAAAGCAGTTCGGCCTTCCCAGATAATGCTGCCCGCAGGGAGGTGGAGAGCCT GCCGGCCGTCTGTCCCAGTGATGGATGCACCTGGAAGGGGACCCTGAAAGAATACGAGAGCTGCCACGAAGGCCGCTGCCCGCTCATGCT GACCGAATGTCCCGCGTGCAAAGGCCTGGTCCGCCTTGGTGAAAAGGAGCGCCACCTGGAGCACGAGTGCCCGGAGAGAAGCCTGAGCTG CCGGCATTGCCGGGCACCCTGCTGCGGAGCAGACGTGAAGGCGCACCACGAGGTCTGCCCCAAGTTCCCCTTAACTTGTGACGGCTGCGG CAAGAAGAAGATCCCCCGGGAGAAGTTTCAGGACCACGTCAAGACTTGTGGCAAGTGTCGAGTCCCTTGCAGATTCCACGCCATCGGCTG CCTCGAGACGGTAGAGGGTGAGAAACAGCAGGAGCACGAGGTGCAGTGGCTGCGGGAGCACCTGGCCATGCTACTGAGCTCGGTGCTGGA GGCAAAGCCCCTCTTGGGAGACCAGAGCCACGCGGGGTCAGAGCTCCTGCAGAGGTGCGAGAGCCTGGAGAAGAAGACGGCCACTTTTGA GAACATTGTCTGCGTCCTGAACCGGGAGGTGGAGAGGGTGGCCATGACTGCCGAGGCCTGCAGCCGGCAGCACCGGCTGGACCAAGACAA GATTGAAGCCCTGAGTAGCAAGGTGCAGCAGCTGGAGAGGAGCATTGGCCTCAAGGACCTGGCGATGGCTGACTTGGAGCAGAAGGTCTT GGAGATGGAGGCATCCACCTACGATGGGGTCTTCATCTGGAAGATCTCAGACTTCGCCAGGAAGCGCCAGGAAGCTGTGGCTGGCCGCAT ACCCGCCATCTTCTCCCCAGCCTGCTGCGGTGGCCCTTCAACCAGAAGCCCAACATACCAAGATGGCAACCAGACGATAAGAAACTACCA GAGCCGGAGCCCCAGCCCCTTTCCCTGCCATCCCTGCAAAATGCCTCGTCTTTGGATGCCACCAGCTCTTCAAAGGACTCCAGGTCCCAG CTGATACCCTCAGAGTCCGACCAAGAAGTCACGTCTCCATCCCAGTCCTCAACAGCTTCTGCAGACCCAAGCATCTGGGGGGACCCCAAA CCCTCTCCTCTCACAGAGCCCCTAATTCTTCATCTCACCCCTTCCCACAAGGCAGCTGAAGATTCTACAGCCCAGGAAAACCCCACTCCC TGGCTCTCCACTGCACCCACTGAGCCCAGCCCTCCAGAAAGCCCCCAAATTCTGGCCCCCACAAAGCCCAACTTTGATATAGCCTGGACG TCCCAGCCCCTTGATCCTTCCTCAGACCCCAGTTCTCTGGAGGACCCCAGAGCCCGGCCTCCCAAAGCCCTGCTGGCAGAGCGCGCTCAC CTCCAGCCACGGGAGGAACCAGGAGCCCTGAATTCCCCTGCTACACCCACCAGCAACTGTCAAAAGTCCCAGCCCAGCAGCCGGCCCAGA GTCGCTGATCTTAAGAAGTGCTTTGAGGGTTAAGAATCAGACACCCCCACTGAGCCCTGAGGATGAGGGGTGCCCGTGGGCAGAAGAAGC TCTGGACAGCAGCTTCTTGGGGTCTGGAGAAGAACTGGATTTGTTGAGCGAGATTCTGGACAGTCTTAGCATGGGAGCCAAGAGCGCAGG CAGCCTGAGACCGAGCCAGAGTTTAGACTGCTGTCACAGAGGAGACCTGGACAGCTGCTTCAGCCTGAACCGGCCCCTTCGCCCCAGCAG GAGACGCCAGCTGGAAGAGGGAACTTCCGAGCCCCCAGGGGCGGGGATGGGGACTCTGTCCTGCAGAGGGGGGGCTCTCTGAGGGCCCCA GCCCTCCCCAGCCGCTCAGACCGCCTGCAGCAACGCCTCCCAATCACTCAGCACTTTGGAAAGGCCAAGAGTGGCTTGAAGGGGGTGCAG AGCCTTCTAATGTATAAGAAAGGTGGTGGCGCCCTCCTGCACTCAGTCAAGGCCAAGACCCAACCAGCCGTCAAGAACATGTACCGCTCG GGGCCCTTCGATCCTATCAGCTCTGGGCCGACAATCTAAAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAAGGGGGAGGGCTTCTCAG ATCAATTCGAGCAGGAGATCACTGGCTGCGGGGCCTCCTCAGGGCCAGCCAGTGACCTTCAGTGAGGAAGTCTTCTTGGCCCAGAAGCCT GGGGCACCTCTGCAGGCCTTCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGGTGTCCCTGCTGAGGCTCCGGCTCAGGAAGGTC GCCCTGGCCCCCGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGGGGGTACCGCGACGCACTCGTCTGCAGC CCGAGAGTACGAGAAAAAGCCCTGGAGGACGTCGTGGTGCTGAACGTGGACGCCAATACCTTGGAGACGACCTTTAACGACGTGCAGGCG CTGCCTCCAGACGTGCGCGCCCATGCCCTACCTCATTGGAGTGCACGCCAGTCTCGCCGAGCATGCGCTGGGAGCACGTGCTGATCCCCA >93646_93646_2_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000247668_DENND1C_chr19_6475907_ENST00000543576_length(amino acids)=441AA_BP=391 MFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGI SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCG ADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQS HAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDG -------------------------------------------------------------- >93646_93646_3_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000359662_DENND1C_chr19_6475907_ENST00000381480_length(transcript)=3351nt_BP=1367nt CGCGCTGCGACCGTTGGGGCTTTGTTCGCGGGGGTCACAGCTCTCATGGCTGCAGCTAGCGTGACCCCCCCTGGCTCCCTGGAGTTGCTA CAGCCCGGCTTCTCCAAGACCCTCCTGGGGACCAAGCTGGAAGCCAAGTACCTGTGCTCCGCCTGCAGAAACGTCCTCCGCAGGCCCTTC CAGGCGCAGTGTGGCCACCGGTACTGCTCCTTCTGCCTGGCCAGCATCCTCAGCTCTGGGCCTCAGAACTGTGCTGCCTGTGTTCACGAG GGCATATATGAAGAAGGCATTTCTATTTTAGAAAGCAGTTCGGCCTTCCCAGATAATGCTGCCCGCAGGGAGGTGGAGAGCCTGCCGGCC GTCTGTCCCAGTGATGGATGCACCTGGAAGGGGACCCTGAAAGAATACGAGGTAAAGATGCCTGCGTGTGGCATGGTGACAGAAGCTCCA GCAGTCGGGAGTCGTCCACGCTCCCCAAGCAGTTATGACCTTGTCCTGCACGTTCCTCTCACTGGGGCTGAAGCCTGTCTGATGTCTGTG GAGGAAGAGACGGAGCTGCTCCTTAGAAGCTGCCACGAAGGCCGCTGCCCGCTCATGCTGACCGAATGTCCCGCGTGCAAAGGCCTGGTC CGCCTTGGTGAAAAGGAGCGCCACCTGGAGCACGAGTGCCCGGAGAGAAGCCTGAGCTGCCGGCATTGCCGGGCACCCTGCTGCGGAGCA GACGTGAAGGCGCACCACGAGGTCTGCCCCAAGTTCCCCTTAACTTGTGACGGCTGCGGCAAGAAGAAGATCCCCCGGGAGAAGTTTCAG GACCACGTCAAGACTTGTGGCAAGTGTCGAGTCCCTTGCAGATTCCACGCCATCGGCTGCCTCGAGACGGTAGAGGGTGAGAAACAGCAG GAGCACGAGGTGCAGTGGCTGCGGGAGCACCTGGCCATGCTACTGAGCTCGGTGCTGGAGGCAAAGCCCCTCTTGGGAGACCAGAGCCAC GCGGGGTCAGAGCTCCTGCAGAGGTGCGAGAGCCTGGAGAAGAAGACGGCCACTTTTGAGAACATTGTCTGCGTCCTGAACCGGGAGGTG GAGAGGGTGGCCATGACTGCCGAGGCCTGCAGCCGGCAGCACCGGCTGGACCAAGACAAGATTGAAGCCCTGAGTAGCAAGGTGCAGCAG CTGGAGAGGAGCATTGGCCTCAAGGACCTGGCGATGGCTGACTTGGAGCAGAAGGTCTTGGAGATGGAGGCATCCACCTACGATGGGGTC TTCATCTGGAAGATCTCAGACTTCGCCAGGAAGCGCCAGGAAGCTGTGGCTGGCCGCATACCCGCCATCTTCTCCCCAGCCTGCTGCGGT GGCCCTTCAACCAGAAGCCCAACATACCAAGATGGCAACCAGACGATAAGAAACTACCAGAGCCGGAGCCCCAGCCCCTTTCCCTGCCAT CCCTGCAAAATGCCTCGTCTTTGGATGCCACCAGCTCTTCAAAGGACTCCAGGTCCCAGCTGATACCCTCAGAGTCCGACCAAGAAGTCA CGTCTCCATCCCAGTCCTCAACAGCTTCTGCAGACCCAAGCATCTGGGGGGACCCCAAACCCTCTCCTCTCACAGAGCCCCTAATTCTTC ATCTCACCCCTTCCCACAAGGCAGCTGAAGATTCTACAGCCCAGGAAAACCCCACTCCCTGGCTCTCCACTGCACCCACTGAGCCCAGCC CTCCAGAAAGCCCCCAAATTCTGGCCCCCACAAAGCCCAACTTTGATATAGCCTGGACGTCCCAGCCCCTTGATCCTTCCTCAGACCCCA GTTCTCTGGAGGACCCCAGAGCCCGGCCTCCCAAAGCCCTGCTGGCAGAGCGCGCTCACCTCCAGCCACGGGAGGAACCAGGAGCCCTGA ATTCCCCTGCTACACCCACCAGCAACTGTCAAAAGTCCCAGCCCAGCAGCCGGCCCAGAGTCGCTGATCTTAAGAAGTGCTTTGAGGGTT AAGAATCAGGGGTCCAAGAGAGACCCCAGTCCCTCAATAAAGCCACAAGAGCCCAAAAAAGCTGGTTTTTTTCCTGGTGAATTTCTCTGG TGCCCTCACTCTGCTCGGAAATCCATCCCACCCACCTCTGTCCCTCCAAGGGCAGCCTCTCTAACTGGCTCCTAGCAGGGAATTCCAGGA AGCCTCCTGGTCTTCTAGAATCCTGGCAACCTTACAATTCCTCTCGGCATTTGTCACTTCCATCTCAGCTAATGCACCCACCAGCTCAAA CACACCAATAAAGCTTTTGTTACATCTCAGACACCCCCACTGAGCCCTGAGGATGAGGGGTGCCCGTGGGCAGAAGAAGCTCTGGACAGC AGCTTCTTGGGGTCTGGAGAAGAACTGGATTTGTTGAGCGAGATTCTGGACAGTCTTAGCATGGGAGCCAAGAGCGCAGGCAGCCTGAGA CCGAGCCAGAGTTTAGACTGCTGTCACAGAGGAGACCTGGACAGCTGCTTCAGCCTGAACCGGCCCCTTCGCCCCAGCAGGAGACGCCAG CTGGAAGAGGGAACTTCCGAGCCCCCAGGGGCGGGGATGGGGACTCTGTCCTGCAGAGGGGGGGCTCTCTGAGGGCCCCAGCCCTCCCCA GCCGCTCAGACCGCCTGCAGCAACGCCTCCCAATCACTCAGCACTTTGGAAAGGCCAAGAGTGGCTTGAAGGGGGTGCAGAGCCTTCTAA TGTATAAGAAAGGTGGTGGCGCCCTCCTGCACTCAGTCAAGGCCAAGACCCAACCAGCCGTCAAGAACATGTACCGCTCGGGGCCCTTCG ATCCTATCAGCTCTGGGCCGACAATCTAAAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAAGGGGGAGGGCTTCTCAGATCAATTCGA GCAGGAGATCACTGGCTGCGGGGCCTCCTCAGGGCCAGCCAGTGACCTTCAGTGAGGAAGTCTTCTTGGCCCAGAAGCCTGGGGCACCTC TGCAGGCCTTCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGGTGTCCCTGCTGAGGCTCCGGCTCAGGAAGGTCGCCCTGGCCC CCGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGGGGGTACCGCGACGCACTCGTCTGCAGCCCGAGAGTAC GAGAAAAAGCCCTGGAGGACGTCGTGGTGCTGAACGTGGACGCCAATACCTTGGAGACGACCTTTAACGACGTGCAGGCGCTGCCTCCAG ACGTGCGCGCCCATGCCCTACCTCATTGGAGTGCACGCCAGTCTCGCCGAGCATGCGCTGGGAGCACGTGCTGATCCCCACGCTGCCCCC >93646_93646_3_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000359662_DENND1C_chr19_6475907_ENST00000381480_length(amino acids)=493AA_BP=443 MFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGI SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYEVKMPACGMVTEAPAVGSRPRSPSSYDLVLHVPLTGAEACLMSVEEETELL LRSCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG KCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPACCGGPSTRSP -------------------------------------------------------------- >93646_93646_4_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000359662_DENND1C_chr19_6475907_ENST00000543576_length(transcript)=3060nt_BP=1367nt CGCGCTGCGACCGTTGGGGCTTTGTTCGCGGGGGTCACAGCTCTCATGGCTGCAGCTAGCGTGACCCCCCCTGGCTCCCTGGAGTTGCTA CAGCCCGGCTTCTCCAAGACCCTCCTGGGGACCAAGCTGGAAGCCAAGTACCTGTGCTCCGCCTGCAGAAACGTCCTCCGCAGGCCCTTC CAGGCGCAGTGTGGCCACCGGTACTGCTCCTTCTGCCTGGCCAGCATCCTCAGCTCTGGGCCTCAGAACTGTGCTGCCTGTGTTCACGAG GGCATATATGAAGAAGGCATTTCTATTTTAGAAAGCAGTTCGGCCTTCCCAGATAATGCTGCCCGCAGGGAGGTGGAGAGCCTGCCGGCC GTCTGTCCCAGTGATGGATGCACCTGGAAGGGGACCCTGAAAGAATACGAGGTAAAGATGCCTGCGTGTGGCATGGTGACAGAAGCTCCA GCAGTCGGGAGTCGTCCACGCTCCCCAAGCAGTTATGACCTTGTCCTGCACGTTCCTCTCACTGGGGCTGAAGCCTGTCTGATGTCTGTG GAGGAAGAGACGGAGCTGCTCCTTAGAAGCTGCCACGAAGGCCGCTGCCCGCTCATGCTGACCGAATGTCCCGCGTGCAAAGGCCTGGTC CGCCTTGGTGAAAAGGAGCGCCACCTGGAGCACGAGTGCCCGGAGAGAAGCCTGAGCTGCCGGCATTGCCGGGCACCCTGCTGCGGAGCA GACGTGAAGGCGCACCACGAGGTCTGCCCCAAGTTCCCCTTAACTTGTGACGGCTGCGGCAAGAAGAAGATCCCCCGGGAGAAGTTTCAG GACCACGTCAAGACTTGTGGCAAGTGTCGAGTCCCTTGCAGATTCCACGCCATCGGCTGCCTCGAGACGGTAGAGGGTGAGAAACAGCAG GAGCACGAGGTGCAGTGGCTGCGGGAGCACCTGGCCATGCTACTGAGCTCGGTGCTGGAGGCAAAGCCCCTCTTGGGAGACCAGAGCCAC GCGGGGTCAGAGCTCCTGCAGAGGTGCGAGAGCCTGGAGAAGAAGACGGCCACTTTTGAGAACATTGTCTGCGTCCTGAACCGGGAGGTG GAGAGGGTGGCCATGACTGCCGAGGCCTGCAGCCGGCAGCACCGGCTGGACCAAGACAAGATTGAAGCCCTGAGTAGCAAGGTGCAGCAG CTGGAGAGGAGCATTGGCCTCAAGGACCTGGCGATGGCTGACTTGGAGCAGAAGGTCTTGGAGATGGAGGCATCCACCTACGATGGGGTC TTCATCTGGAAGATCTCAGACTTCGCCAGGAAGCGCCAGGAAGCTGTGGCTGGCCGCATACCCGCCATCTTCTCCCCAGCCTGCTGCGGT GGCCCTTCAACCAGAAGCCCAACATACCAAGATGGCAACCAGACGATAAGAAACTACCAGAGCCGGAGCCCCAGCCCCTTTCCCTGCCAT CCCTGCAAAATGCCTCGTCTTTGGATGCCACCAGCTCTTCAAAGGACTCCAGGTCCCAGCTGATACCCTCAGAGTCCGACCAAGAAGTCA CGTCTCCATCCCAGTCCTCAACAGCTTCTGCAGACCCAAGCATCTGGGGGGACCCCAAACCCTCTCCTCTCACAGAGCCCCTAATTCTTC ATCTCACCCCTTCCCACAAGGCAGCTGAAGATTCTACAGCCCAGGAAAACCCCACTCCCTGGCTCTCCACTGCACCCACTGAGCCCAGCC CTCCAGAAAGCCCCCAAATTCTGGCCCCCACAAAGCCCAACTTTGATATAGCCTGGACGTCCCAGCCCCTTGATCCTTCCTCAGACCCCA GTTCTCTGGAGGACCCCAGAGCCCGGCCTCCCAAAGCCCTGCTGGCAGAGCGCGCTCACCTCCAGCCACGGGAGGAACCAGGAGCCCTGA ATTCCCCTGCTACACCCACCAGCAACTGTCAAAAGTCCCAGCCCAGCAGCCGGCCCAGAGTCGCTGATCTTAAGAAGTGCTTTGAGGGTT AAGAATCAGACACCCCCACTGAGCCCTGAGGATGAGGGGTGCCCGTGGGCAGAAGAAGCTCTGGACAGCAGCTTCTTGGGGTCTGGAGAA GAACTGGATTTGTTGAGCGAGATTCTGGACAGTCTTAGCATGGGAGCCAAGAGCGCAGGCAGCCTGAGACCGAGCCAGAGTTTAGACTGC TGTCACAGAGGAGACCTGGACAGCTGCTTCAGCCTGAACCGGCCCCTTCGCCCCAGCAGGAGACGCCAGCTGGAAGAGGGAACTTCCGAG CCCCCAGGGGCGGGGATGGGGACTCTGTCCTGCAGAGGGGGGGCTCTCTGAGGGCCCCAGCCCTCCCCAGCCGCTCAGACCGCCTGCAGC AACGCCTCCCAATCACTCAGCACTTTGGAAAGGCCAAGAGTGGCTTGAAGGGGGTGCAGAGCCTTCTAATGTATAAGAAAGGTGGTGGCG CCCTCCTGCACTCAGTCAAGGCCAAGACCCAACCAGCCGTCAAGAACATGTACCGCTCGGGGCCCTTCGATCCTATCAGCTCTGGGCCGA CAATCTAAAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAAGGGGGAGGGCTTCTCAGATCAATTCGAGCAGGAGATCACTGGCTGCGG GGCCTCCTCAGGGCCAGCCAGTGACCTTCAGTGAGGAAGTCTTCTTGGCCCAGAAGCCTGGGGCACCTCTGCAGGCCTTCCACCGGCGGG CTGTGCACCTGCAGCTGTTCAAACAGGTGTCCCTGCTGAGGCTCCGGCTCAGGAAGGTCGCCCTGGCCCCCGGGGAAGGGGTGTCCCGTC TCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGGGGGTACCGCGACGCACTCGTCTGCAGCCCGAGAGTACGAGAAAAAGCCCTGGAGGACG TCGTGGTGCTGAACGTGGACGCCAATACCTTGGAGACGACCTTTAACGACGTGCAGGCGCTGCCTCCAGACGTGCGCGCCCATGCCCTAC CTCATTGGAGTGCACGCCAGTCTCGCCGAGCATGCGCTGGGAGCACGTGCTGATCCCCACGCTGCCCCCACACCTGCTGGACTACTGCTG >93646_93646_4_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000359662_DENND1C_chr19_6475907_ENST00000543576_length(amino acids)=493AA_BP=443 MFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGI SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYEVKMPACGMVTEAPAVGSRPRSPSSYDLVLHVPLTGAEACLMSVEEETELL LRSCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG KCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPACCGGPSTRSP -------------------------------------------------------------- >93646_93646_5_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000536468_DENND1C_chr19_6475907_ENST00000381480_length(transcript)=3323nt_BP=1339nt GAAACCAGCTTCCCTCGGAGGCTGCAGCACAGGGCTGACATGCAAACGTCTGAAAAAGAGGCAAGCTCTCGGTGTGAGCAAGTGGACTGC GGCTATTTGAGGAAGGAGCCCACGTGGGAATCCCCTGAGCTGCGCCATGGCCAGAGGCTTTGTTCGCGGGGGTCACAGCTCTCATGGCTG CAGCTAGCGTGACCCCCCCTGGCTCCCTGGAGTTGCTACAGCCCGGCTTCTCCAAGACCCTCCTGGGGACCAAGCTGGAAGCCAAGTACC TGTGCTCCGCCTGCAGAAACGTCCTCCGCAGGCCCTTCCAGGCGCAGTGTGGCCACCGGTACTGCTCCTTCTGCCTGGCCAGCATCCTCA GCTCTGGGCCTCAGAACTGTGCTGCCTGTGTTCACGAGGGCATATATGAAGAAGGCATTTCTATTTTAGAAAGCAGTTCGGCCTTCCCAG ATAATGCTGCCCGCAGGGAGGTGGAGAGCCTGCCGGCCGTCTGTCCCAGTGATGGATGCACCTGGAAGGGGACCCTGAAAGAATACGAGA GCTGCCACGAAGGCCGCTGCCCGCTCATGCTGACCGAATGTCCCGCGTGCAAAGGCCTGGTCCGCCTTGGTGAAAAGGAGCGCCACCTGG AGCACGAGTGCCCGGAGAGAAGCCTGAGCTGCCGGCATTGCCGGGCACCCTGCTGCGGAGCAGACGTGAAGGCGCACCACGAGGTCTGCC CCAAGTTCCCCTTAACTTGTGACGGCTGCGGCAAGAAGAAGATCCCCCGGGAGAAGTTTCAGGACCACGTCAAGACTTGTGGCAAGTGTC GAGTCCCTTGCAGATTCCACGCCATCGGCTGCCTCGAGACGGTAGAGGGTGAGAAACAGCAGGAGCACGAGGTGCAGTGGCTGCGGGAGC ACCTGGCCATGCTACTGAGCTCGGTGCTGGAGGCAAAGCCCCTCTTGGGAGACCAGAGCCACGCGGGGTCAGAGCTCCTGCAGAGGTGCG AGAGCCTGGAGAAGAAGACGGCCACTTTTGAGAACATTGTCTGCGTCCTGAACCGGGAGGTGGAGAGGGTGGCCATGACTGCCGAGGCCT GCAGCCGGCAGCACCGGCTGGACCAAGACAAGATTGAAGCCCTGAGTAGCAAGGTGCAGCAGCTGGAGAGGAGCATTGGCCTCAAGGACC TGGCGATGGCTGACTTGGAGCAGAAGGTCTTGGAGATGGAGGCATCCACCTACGATGGGGTCTTCATCTGGAAGATCTCAGACTTCGCCA GGAAGCGCCAGGAAGCTGTGGCTGGCCGCATACCCGCCATCTTCTCCCCAGCCTGCTGCGGTGGCCCTTCAACCAGAAGCCCAACATACC AAGATGGCAACCAGACGATAAGAAACTACCAGAGCCGGAGCCCCAGCCCCTTTCCCTGCCATCCCTGCAAAATGCCTCGTCTTTGGATGC CACCAGCTCTTCAAAGGACTCCAGGTCCCAGCTGATACCCTCAGAGTCCGACCAAGAAGTCACGTCTCCATCCCAGTCCTCAACAGCTTC TGCAGACCCAAGCATCTGGGGGGACCCCAAACCCTCTCCTCTCACAGAGCCCCTAATTCTTCATCTCACCCCTTCCCACAAGGCAGCTGA AGATTCTACAGCCCAGGAAAACCCCACTCCCTGGCTCTCCACTGCACCCACTGAGCCCAGCCCTCCAGAAAGCCCCCAAATTCTGGCCCC CACAAAGCCCAACTTTGATATAGCCTGGACGTCCCAGCCCCTTGATCCTTCCTCAGACCCCAGTTCTCTGGAGGACCCCAGAGCCCGGCC TCCCAAAGCCCTGCTGGCAGAGCGCGCTCACCTCCAGCCACGGGAGGAACCAGGAGCCCTGAATTCCCCTGCTACACCCACCAGCAACTG TCAAAAGTCCCAGCCCAGCAGCCGGCCCAGAGTCGCTGATCTTAAGAAGTGCTTTGAGGGTTAAGAATCAGGGGTCCAAGAGAGACCCCA GTCCCTCAATAAAGCCACAAGAGCCCAAAAAAGCTGGTTTTTTTCCTGGTGAATTTCTCTGGTGCCCTCACTCTGCTCGGAAATCCATCC CACCCACCTCTGTCCCTCCAAGGGCAGCCTCTCTAACTGGCTCCTAGCAGGGAATTCCAGGAAGCCTCCTGGTCTTCTAGAATCCTGGCA ACCTTACAATTCCTCTCGGCATTTGTCACTTCCATCTCAGCTAATGCACCCACCAGCTCAAACACACCAATAAAGCTTTTGTTACATCTC AGACACCCCCACTGAGCCCTGAGGATGAGGGGTGCCCGTGGGCAGAAGAAGCTCTGGACAGCAGCTTCTTGGGGTCTGGAGAAGAACTGG ATTTGTTGAGCGAGATTCTGGACAGTCTTAGCATGGGAGCCAAGAGCGCAGGCAGCCTGAGACCGAGCCAGAGTTTAGACTGCTGTCACA GAGGAGACCTGGACAGCTGCTTCAGCCTGAACCGGCCCCTTCGCCCCAGCAGGAGACGCCAGCTGGAAGAGGGAACTTCCGAGCCCCCAG GGGCGGGGATGGGGACTCTGTCCTGCAGAGGGGGGGCTCTCTGAGGGCCCCAGCCCTCCCCAGCCGCTCAGACCGCCTGCAGCAACGCCT CCCAATCACTCAGCACTTTGGAAAGGCCAAGAGTGGCTTGAAGGGGGTGCAGAGCCTTCTAATGTATAAGAAAGGTGGTGGCGCCCTCCT GCACTCAGTCAAGGCCAAGACCCAACCAGCCGTCAAGAACATGTACCGCTCGGGGCCCTTCGATCCTATCAGCTCTGGGCCGACAATCTA AAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAAGGGGGAGGGCTTCTCAGATCAATTCGAGCAGGAGATCACTGGCTGCGGGGCCTCC TCAGGGCCAGCCAGTGACCTTCAGTGAGGAAGTCTTCTTGGCCCAGAAGCCTGGGGCACCTCTGCAGGCCTTCCACCGGCGGGCTGTGCA CCTGCAGCTGTTCAAACAGGTGTCCCTGCTGAGGCTCCGGCTCAGGAAGGTCGCCCTGGCCCCCGGGGAAGGGGTGTCCCGTCTCTTCCT CAAAGCCCAGGCCCTGCTCTTCGGGGGGTACCGCGACGCACTCGTCTGCAGCCCGAGAGTACGAGAAAAAGCCCTGGAGGACGTCGTGGT GCTGAACGTGGACGCCAATACCTTGGAGACGACCTTTAACGACGTGCAGGCGCTGCCTCCAGACGTGCGCGCCCATGCCCTACCTCATTG >93646_93646_5_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000536468_DENND1C_chr19_6475907_ENST00000381480_length(amino acids)=441AA_BP=391 MFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGI SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCG ADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQS HAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDG -------------------------------------------------------------- >93646_93646_6_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000536468_DENND1C_chr19_6475907_ENST00000543576_length(transcript)=3032nt_BP=1339nt GAAACCAGCTTCCCTCGGAGGCTGCAGCACAGGGCTGACATGCAAACGTCTGAAAAAGAGGCAAGCTCTCGGTGTGAGCAAGTGGACTGC GGCTATTTGAGGAAGGAGCCCACGTGGGAATCCCCTGAGCTGCGCCATGGCCAGAGGCTTTGTTCGCGGGGGTCACAGCTCTCATGGCTG CAGCTAGCGTGACCCCCCCTGGCTCCCTGGAGTTGCTACAGCCCGGCTTCTCCAAGACCCTCCTGGGGACCAAGCTGGAAGCCAAGTACC TGTGCTCCGCCTGCAGAAACGTCCTCCGCAGGCCCTTCCAGGCGCAGTGTGGCCACCGGTACTGCTCCTTCTGCCTGGCCAGCATCCTCA GCTCTGGGCCTCAGAACTGTGCTGCCTGTGTTCACGAGGGCATATATGAAGAAGGCATTTCTATTTTAGAAAGCAGTTCGGCCTTCCCAG ATAATGCTGCCCGCAGGGAGGTGGAGAGCCTGCCGGCCGTCTGTCCCAGTGATGGATGCACCTGGAAGGGGACCCTGAAAGAATACGAGA GCTGCCACGAAGGCCGCTGCCCGCTCATGCTGACCGAATGTCCCGCGTGCAAAGGCCTGGTCCGCCTTGGTGAAAAGGAGCGCCACCTGG AGCACGAGTGCCCGGAGAGAAGCCTGAGCTGCCGGCATTGCCGGGCACCCTGCTGCGGAGCAGACGTGAAGGCGCACCACGAGGTCTGCC CCAAGTTCCCCTTAACTTGTGACGGCTGCGGCAAGAAGAAGATCCCCCGGGAGAAGTTTCAGGACCACGTCAAGACTTGTGGCAAGTGTC GAGTCCCTTGCAGATTCCACGCCATCGGCTGCCTCGAGACGGTAGAGGGTGAGAAACAGCAGGAGCACGAGGTGCAGTGGCTGCGGGAGC ACCTGGCCATGCTACTGAGCTCGGTGCTGGAGGCAAAGCCCCTCTTGGGAGACCAGAGCCACGCGGGGTCAGAGCTCCTGCAGAGGTGCG AGAGCCTGGAGAAGAAGACGGCCACTTTTGAGAACATTGTCTGCGTCCTGAACCGGGAGGTGGAGAGGGTGGCCATGACTGCCGAGGCCT GCAGCCGGCAGCACCGGCTGGACCAAGACAAGATTGAAGCCCTGAGTAGCAAGGTGCAGCAGCTGGAGAGGAGCATTGGCCTCAAGGACC TGGCGATGGCTGACTTGGAGCAGAAGGTCTTGGAGATGGAGGCATCCACCTACGATGGGGTCTTCATCTGGAAGATCTCAGACTTCGCCA GGAAGCGCCAGGAAGCTGTGGCTGGCCGCATACCCGCCATCTTCTCCCCAGCCTGCTGCGGTGGCCCTTCAACCAGAAGCCCAACATACC AAGATGGCAACCAGACGATAAGAAACTACCAGAGCCGGAGCCCCAGCCCCTTTCCCTGCCATCCCTGCAAAATGCCTCGTCTTTGGATGC CACCAGCTCTTCAAAGGACTCCAGGTCCCAGCTGATACCCTCAGAGTCCGACCAAGAAGTCACGTCTCCATCCCAGTCCTCAACAGCTTC TGCAGACCCAAGCATCTGGGGGGACCCCAAACCCTCTCCTCTCACAGAGCCCCTAATTCTTCATCTCACCCCTTCCCACAAGGCAGCTGA AGATTCTACAGCCCAGGAAAACCCCACTCCCTGGCTCTCCACTGCACCCACTGAGCCCAGCCCTCCAGAAAGCCCCCAAATTCTGGCCCC CACAAAGCCCAACTTTGATATAGCCTGGACGTCCCAGCCCCTTGATCCTTCCTCAGACCCCAGTTCTCTGGAGGACCCCAGAGCCCGGCC TCCCAAAGCCCTGCTGGCAGAGCGCGCTCACCTCCAGCCACGGGAGGAACCAGGAGCCCTGAATTCCCCTGCTACACCCACCAGCAACTG TCAAAAGTCCCAGCCCAGCAGCCGGCCCAGAGTCGCTGATCTTAAGAAGTGCTTTGAGGGTTAAGAATCAGACACCCCCACTGAGCCCTG AGGATGAGGGGTGCCCGTGGGCAGAAGAAGCTCTGGACAGCAGCTTCTTGGGGTCTGGAGAAGAACTGGATTTGTTGAGCGAGATTCTGG ACAGTCTTAGCATGGGAGCCAAGAGCGCAGGCAGCCTGAGACCGAGCCAGAGTTTAGACTGCTGTCACAGAGGAGACCTGGACAGCTGCT TCAGCCTGAACCGGCCCCTTCGCCCCAGCAGGAGACGCCAGCTGGAAGAGGGAACTTCCGAGCCCCCAGGGGCGGGGATGGGGACTCTGT CCTGCAGAGGGGGGGCTCTCTGAGGGCCCCAGCCCTCCCCAGCCGCTCAGACCGCCTGCAGCAACGCCTCCCAATCACTCAGCACTTTGG AAAGGCCAAGAGTGGCTTGAAGGGGGTGCAGAGCCTTCTAATGTATAAGAAAGGTGGTGGCGCCCTCCTGCACTCAGTCAAGGCCAAGAC CCAACCAGCCGTCAAGAACATGTACCGCTCGGGGCCCTTCGATCCTATCAGCTCTGGGCCGACAATCTAAAGTTCATCGAAGCCCGGCTG GAGAAGCTCAACAAGGGGGAGGGCTTCTCAGATCAATTCGAGCAGGAGATCACTGGCTGCGGGGCCTCCTCAGGGCCAGCCAGTGACCTT CAGTGAGGAAGTCTTCTTGGCCCAGAAGCCTGGGGCACCTCTGCAGGCCTTCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGGT GTCCCTGCTGAGGCTCCGGCTCAGGAAGGTCGCCCTGGCCCCCGGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTT CGGGGGGTACCGCGACGCACTCGTCTGCAGCCCGAGAGTACGAGAAAAAGCCCTGGAGGACGTCGTGGTGCTGAACGTGGACGCCAATAC CTTGGAGACGACCTTTAACGACGTGCAGGCGCTGCCTCCAGACGTGCGCGCCCATGCCCTACCTCATTGGAGTGCACGCCAGTCTCGCCG >93646_93646_6_TRAF2-DENND1C_TRAF2_chr9_139818424_ENST00000536468_DENND1C_chr19_6475907_ENST00000543576_length(amino acids)=441AA_BP=391 MFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGI SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCG ADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQS HAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TRAF2-DENND1C |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TRAF2-DENND1C |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TRAF2-DENND1C |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |