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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:TRANK1-MAP4 (FusionGDB2 ID:93754)

Fusion Gene Summary for TRANK1-MAP4

check button Fusion gene summary
Fusion gene informationFusion gene name: TRANK1-MAP4
Fusion gene ID: 93754
HgeneTgene
Gene symbol

TRANK1

MAP4

Gene ID

9881

4134

Gene nametetratricopeptide repeat and ankyrin repeat containing 1microtubule associated protein 4
SynonymsLBA1-
Cytomap

3p22.2

3p21.31

Type of geneprotein-codingprotein-coding
DescriptionTPR and ankyrin repeat-containing protein 1lupus brain antigen 1 homologmicrotubule-associated protein 4MAP-4
Modification date2020031320200313
UniProtAcc.

Q9Y4K4

Ensembl transtripts involved in fusion geneENST00000429976, ENST00000301807, 
ENST00000428977, ENST00000463984, 
ENST00000441748, ENST00000462206, 
ENST00000264724, ENST00000420772, 
ENST00000434267, ENST00000439356, 
ENST00000360240, ENST00000383737, 
ENST00000395734, ENST00000426837, 
Fusion gene scores* DoF score1 X 1 X 1=119 X 21 X 12=4788
# samples 135
** MAII scorelog2(1/1*10)=3.32192809488736log2(35/4788*10)=-3.77399632511117
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TRANK1 [Title/Abstract] AND MAP4 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointTRANK1(36931320)-MAP4(47919013), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across TRANK1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across MAP4 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4KIRCTCGA-CZ-5455-01ATRANK1chr3

36931320

-MAP4chr3

47919013

-


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Fusion Gene ORF analysis for TRANK1-MAP4

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000429976ENST00000441748TRANK1chr3

36931320

-MAP4chr3

47919013

-
5CDS-5UTRENST00000429976ENST00000462206TRANK1chr3

36931320

-MAP4chr3

47919013

-
5CDS-intronENST00000429976ENST00000264724TRANK1chr3

36931320

-MAP4chr3

47919013

-
5CDS-intronENST00000429976ENST00000420772TRANK1chr3

36931320

-MAP4chr3

47919013

-
5CDS-intronENST00000429976ENST00000434267TRANK1chr3

36931320

-MAP4chr3

47919013

-
5CDS-intronENST00000429976ENST00000439356TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-3CDSENST00000301807ENST00000360240TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-3CDSENST00000301807ENST00000383737TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-3CDSENST00000301807ENST00000395734TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-3CDSENST00000301807ENST00000426837TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-5UTRENST00000301807ENST00000441748TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-5UTRENST00000301807ENST00000462206TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-intronENST00000301807ENST00000264724TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-intronENST00000301807ENST00000420772TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-intronENST00000301807ENST00000434267TRANK1chr3

36931320

-MAP4chr3

47919013

-
5UTR-intronENST00000301807ENST00000439356TRANK1chr3

36931320

-MAP4chr3

47919013

-
In-frameENST00000429976ENST00000360240TRANK1chr3

36931320

-MAP4chr3

47919013

-
In-frameENST00000429976ENST00000383737TRANK1chr3

36931320

-MAP4chr3

47919013

-
In-frameENST00000429976ENST00000395734TRANK1chr3

36931320

-MAP4chr3

47919013

-
In-frameENST00000429976ENST00000426837TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000428977ENST00000360240TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000428977ENST00000383737TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000428977ENST00000395734TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000428977ENST00000426837TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000463984ENST00000360240TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000463984ENST00000383737TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000463984ENST00000395734TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-3CDSENST00000463984ENST00000426837TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-5UTRENST00000428977ENST00000441748TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-5UTRENST00000428977ENST00000462206TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-5UTRENST00000463984ENST00000441748TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-5UTRENST00000463984ENST00000462206TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000428977ENST00000264724TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000428977ENST00000420772TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000428977ENST00000434267TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000428977ENST00000439356TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000463984ENST00000264724TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000463984ENST00000420772TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000463984ENST00000434267TRANK1chr3

36931320

-MAP4chr3

47919013

-
intron-intronENST00000463984ENST00000439356TRANK1chr3

36931320

-MAP4chr3

47919013

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000429976TRANK1chr336931320-ENST00000383737MAP4chr347919013-461610231192275718
ENST00000429976TRANK1chr336931320-ENST00000395734MAP4chr347919013-452810231192431770
ENST00000429976TRANK1chr336931320-ENST00000426837MAP4chr347919013-442110231192482787
ENST00000429976TRANK1chr336931320-ENST00000360240MAP4chr347919013-364710231192482787

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000429976ENST00000383737TRANK1chr336931320-MAP4chr347919013-0.0051428160.9948572
ENST00000429976ENST00000395734TRANK1chr336931320-MAP4chr347919013-0.0034400270.9965599
ENST00000429976ENST00000426837TRANK1chr336931320-MAP4chr347919013-0.0033803280.9966197
ENST00000429976ENST00000360240TRANK1chr336931320-MAP4chr347919013-0.0032392160.9967608

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Fusion Genomic Features for TRANK1-MAP4


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for TRANK1-MAP4


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:36931320/chr3:47919013)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.MAP4

Q9Y4K4

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. {ECO:0000269|PubMed:9038372}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-72315_482582926.0RepeatNote=TPR 1
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-723168_1982582926.0RepeatNote=ANK 1
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-723203_2322582926.0RepeatNote=ANK 2
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-72350_822582926.0RepeatNote=TPR 2
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704248_5450100.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604248_5450100.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:36931320chr3:47919013ENST000003602407191023_10536661153.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:36931320chr3:47919013ENST000003602407191054_10856661153.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719923_9536661153.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719992_10226661153.0RepeatNote=Tau/MAP 2
TgeneMAP4chr3:36931320chr3:47919013ENST000003957347181023_10536661136.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:36931320chr3:47919013ENST000003957347181054_10856661136.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718923_9536661136.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718992_10226661136.0RepeatNote=Tau/MAP 2
TgeneMAP4chr3:36931320chr3:47919013ENST00000434267041023_10530100.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:36931320chr3:47919013ENST00000434267041054_10850100.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704248_2610100.0RepeatNote=1
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704262_2750100.0RepeatNote=2
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704276_2890100.0RepeatNote=3
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704290_3030100.0RepeatNote=4
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704304_3170100.0RepeatNote=5
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704318_3310100.0RepeatNote=6
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704332_3450100.0RepeatNote=7
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704346_3510100.0RepeatNote=8%3B truncated
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704352_3770100.0RepeatNote=26 residues 1
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704378_4030100.0RepeatNote=26 residues 2
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704408_4210100.0RepeatNote=9
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704422_4330100.0RepeatNote=10
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704434_4470100.0RepeatNote=11
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704448_4610100.0RepeatNote=12
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704462_4750100.0RepeatNote=13
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704476_4890100.0RepeatNote=14
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704490_5030100.0RepeatNote=15
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704504_5170100.0RepeatNote=16
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704532_5450100.0RepeatNote=17
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704923_9530100.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:36931320chr3:47919013ENST0000043426704992_10220100.0RepeatNote=Tau/MAP 2
TgeneMAP4chr3:36931320chr3:47919013ENST00000439356041023_10530100.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:36931320chr3:47919013ENST00000439356041054_10850100.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604248_2610100.0RepeatNote=1
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604262_2750100.0RepeatNote=2
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604276_2890100.0RepeatNote=3
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604290_3030100.0RepeatNote=4
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604304_3170100.0RepeatNote=5
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604318_3310100.0RepeatNote=6
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604332_3450100.0RepeatNote=7
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604346_3510100.0RepeatNote=8%3B truncated
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604352_3770100.0RepeatNote=26 residues 1
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604378_4030100.0RepeatNote=26 residues 2
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604408_4210100.0RepeatNote=9
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604422_4330100.0RepeatNote=10
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604434_4470100.0RepeatNote=11
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604448_4610100.0RepeatNote=12
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604462_4750100.0RepeatNote=13
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604476_4890100.0RepeatNote=14
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604490_5030100.0RepeatNote=15
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604504_5170100.0RepeatNote=16
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604532_5450100.0RepeatNote=17
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604923_9530100.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:36931320chr3:47919013ENST0000043935604992_10220100.0RepeatNote=Tau/MAP 2

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-7232301_23302582926.0Coiled coilOntology_term=ECO:0000255
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-7231076_11152582926.0Compositional biasNote=Glu-rich
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-7231699_17322582926.0RepeatNote=TPR 3
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-7231793_18262582926.0RepeatNote=TPR 4
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-723240_2762582926.0RepeatNote=ANK 3
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-723463_4922582926.0RepeatNote=ANK 4
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-723497_5182582926.0RepeatNote=ANK 5
HgeneTRANK1chr3:36931320chr3:47919013ENST00000429976-723546_5752582926.0RepeatNote=ANK 6
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719248_5456661153.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718248_5456661136.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719248_2616661153.0RepeatNote=1
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719262_2756661153.0RepeatNote=2
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719276_2896661153.0RepeatNote=3
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719290_3036661153.0RepeatNote=4
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719304_3176661153.0RepeatNote=5
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719318_3316661153.0RepeatNote=6
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719332_3456661153.0RepeatNote=7
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719346_3516661153.0RepeatNote=8%3B truncated
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719352_3776661153.0RepeatNote=26 residues 1
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719378_4036661153.0RepeatNote=26 residues 2
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719408_4216661153.0RepeatNote=9
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719422_4336661153.0RepeatNote=10
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719434_4476661153.0RepeatNote=11
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719448_4616661153.0RepeatNote=12
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719462_4756661153.0RepeatNote=13
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719476_4896661153.0RepeatNote=14
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719490_5036661153.0RepeatNote=15
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719504_5176661153.0RepeatNote=16
TgeneMAP4chr3:36931320chr3:47919013ENST00000360240719532_5456661153.0RepeatNote=17
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718248_2616661136.0RepeatNote=1
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718262_2756661136.0RepeatNote=2
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718276_2896661136.0RepeatNote=3
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718290_3036661136.0RepeatNote=4
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718304_3176661136.0RepeatNote=5
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718318_3316661136.0RepeatNote=6
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718332_3456661136.0RepeatNote=7
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718346_3516661136.0RepeatNote=8%3B truncated
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718352_3776661136.0RepeatNote=26 residues 1
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718378_4036661136.0RepeatNote=26 residues 2
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718408_4216661136.0RepeatNote=9
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718422_4336661136.0RepeatNote=10
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718434_4476661136.0RepeatNote=11
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718448_4616661136.0RepeatNote=12
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718462_4756661136.0RepeatNote=13
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718476_4896661136.0RepeatNote=14
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718490_5036661136.0RepeatNote=15
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718504_5176661136.0RepeatNote=16
TgeneMAP4chr3:36931320chr3:47919013ENST00000395734718532_5456661136.0RepeatNote=17


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Fusion Gene Sequence for TRANK1-MAP4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>93754_93754_1_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000360240_length(transcript)=3647nt_BP=1023nt
CTTGGAATAGGTCTGCGGCTGCACACCGCCCGGACGCCGGGGTTCCTGCGTCCCCCGCCCCCTCTGATCGCGGCTGGGTAGCCGAGCCGC
AGGCAGCTGGGGGCCCCCGAACGCCGCCTCTGCATCGCGCCGCCCCTGCCCCGGGCTCCGGTAGCTTTCGGGCTTCCGCACTGCCCGCCG
CGCCCTGCCCACAGGGAAGCGCTTCCCCAGGCGGCGGCGGTCCTGGTGCGGACCCTCCGGCCGCAGCCATGTGGGACCCGCGGGCAGCTA
GGGTTCCCCCGAGGGACTTGGCTGTGCTGCTGTGCAACAAATCAAATGCATTTTTCAGCCTTGGGAAGTGGAATGAGGCATTTGTTGCTG
CCAAGGAATGTCTCCAATGGGATCCAACCTACGTGAAGGGATACTACCGAGCTGGTTATTCCTTGCTGAGGTTGCACCAGCCTTACGAAG
CCGCTCGCATGTTTTTTGAGGGTCTGCGACTTGTGCAGAGAAGCCAAGACCAGGCACCGGTTGCTGATTTCCTTGTTGGAGTCTTCACCA
CTATGAGCAGTGACTCCATTGTTTTGCAAAGTTTCTTGCCTTGCTTTGATCATATTTTCACAACTGGATTCCCAACAGAAGTGTGGCAAT
CTGTAATAGAAAAGTTGGCAAAGAAAGGATTATGGCATTCATTTCTGCTTCTGTCAGCAAAAAAAGACCGATTACCAAGAAATATTCATG
TCCCAGAGTTATCACTGAAAAGTCTCTTTGAGAAATACGTTTTCATTGGACTTTATGAGAAGATGGAACAAGTGCCCAAGTTAGTCCAGT
GGCTCATCTCCATTGGTGCAAGTGTTGAGACTATAGGACCGTATCCCCTTCATGCCCTCATGCGACTCTGTATCCAAGCCAGAGAAAACC
ATCTTTTCCGGTGGTTAATGGATCACAAGCCCGAGTGGAAAGGCCGCATTAACCAGAAGGATGGGGATGGCTGCACTGTCCTGCACGTCG
TCGCTGCCCACTCCCCAGGATACCTCGTTAAGCGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCA
CCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGA
AAGCCAAAACACAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAG
GCTTAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCA
TTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGA
CTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTG
CCATTAAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCA
CCAGTTCCATGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCT
CCCGGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCA
ATACTTCTGCTCCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAG
TAGAGAAAAAAACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGA
AACAACCTGCGGGGAAAGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGC
ATGTCCCTGGAGGTGGTAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCA
AGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATA
ATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGG
AGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTG
ACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTG
TTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATG
CCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCC
CCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
CCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCA
CTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTT
TTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCG
AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGG
TGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATT
TTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCT
CAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGG
CAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTT
GTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGA

>93754_93754_1_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000360240_length(amino acids)=787AA_BP=302
MHRAAPAPGSGSFRASALPAAPCPQGSASPGGGGPGADPPAAAMWDPRAARVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPT
YVKGYYRAGYSLLRLHQPYEAARMFFEGLRLVQRSQDQAPVADFLVGVFTTMSSDSIVLQSFLPCFDHIFTTGFPTEVWQSVIEKLAKKG
LWHSFLLLSAKKDRLPRNIHVPELSLKSLFEKYVFIGLYEKMEQVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHK
PEWKGRINQKDGDGCTVLHVVAAHSPGYLVKRIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLP
KQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAA
VASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFID
KKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIV
SKKVSYSHIQSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGA

--------------------------------------------------------------
>93754_93754_2_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000383737_length(transcript)=4616nt_BP=1023nt
CTTGGAATAGGTCTGCGGCTGCACACCGCCCGGACGCCGGGGTTCCTGCGTCCCCCGCCCCCTCTGATCGCGGCTGGGTAGCCGAGCCGC
AGGCAGCTGGGGGCCCCCGAACGCCGCCTCTGCATCGCGCCGCCCCTGCCCCGGGCTCCGGTAGCTTTCGGGCTTCCGCACTGCCCGCCG
CGCCCTGCCCACAGGGAAGCGCTTCCCCAGGCGGCGGCGGTCCTGGTGCGGACCCTCCGGCCGCAGCCATGTGGGACCCGCGGGCAGCTA
GGGTTCCCCCGAGGGACTTGGCTGTGCTGCTGTGCAACAAATCAAATGCATTTTTCAGCCTTGGGAAGTGGAATGAGGCATTTGTTGCTG
CCAAGGAATGTCTCCAATGGGATCCAACCTACGTGAAGGGATACTACCGAGCTGGTTATTCCTTGCTGAGGTTGCACCAGCCTTACGAAG
CCGCTCGCATGTTTTTTGAGGGTCTGCGACTTGTGCAGAGAAGCCAAGACCAGGCACCGGTTGCTGATTTCCTTGTTGGAGTCTTCACCA
CTATGAGCAGTGACTCCATTGTTTTGCAAAGTTTCTTGCCTTGCTTTGATCATATTTTCACAACTGGATTCCCAACAGAAGTGTGGCAAT
CTGTAATAGAAAAGTTGGCAAAGAAAGGATTATGGCATTCATTTCTGCTTCTGTCAGCAAAAAAAGACCGATTACCAAGAAATATTCATG
TCCCAGAGTTATCACTGAAAAGTCTCTTTGAGAAATACGTTTTCATTGGACTTTATGAGAAGATGGAACAAGTGCCCAAGTTAGTCCAGT
GGCTCATCTCCATTGGTGCAAGTGTTGAGACTATAGGACCGTATCCCCTTCATGCCCTCATGCGACTCTGTATCCAAGCCAGAGAAAACC
ATCTTTTCCGGTGGTTAATGGATCACAAGCCCGAGTGGAAAGGCCGCATTAACCAGAAGGATGGGGATGGCTGCACTGTCCTGCACGTCG
TCGCTGCCCACTCCCCAGGATACCTCGTTAAGCGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCA
CCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGA
AAGCCAAAACACAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAG
GCTTAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCA
TTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGA
CTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTG
CCATTAAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCA
CCAGTTCCATGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCT
CCCGGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCA
ATACTTCTGCTCCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGTTCAGA
TTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCA
AGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTG
CTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGCCTG
AAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACA
GCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCCCCTGTTCCCCT
CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG
ACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCA
GTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACA
CCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGG
GTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAA
GAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAG
CTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCC
CAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTT
CTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGG
AGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGG
CTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCT
AACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAA
AGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAG
GAAATCAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGA
GGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTA
TTGCACTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCA
AGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACC
TCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
GGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAA
ACTGCAGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
AAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAG
ACACCTCAGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAG
GTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAG
TTCCCTCAAAGGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGG
GACATTTCTGTACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAGAGTAAATAAA

>93754_93754_2_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000383737_length(amino acids)=718AA_BP=302
MHRAAPAPGSGSFRASALPAAPCPQGSASPGGGGPGADPPAAAMWDPRAARVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPT
YVKGYYRAGYSLLRLHQPYEAARMFFEGLRLVQRSQDQAPVADFLVGVFTTMSSDSIVLQSFLPCFDHIFTTGFPTEVWQSVIEKLAKKG
LWHSFLLLSAKKDRLPRNIHVPELSLKSLFEKYVFIGLYEKMEQVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHK
PEWKGRINQKDGDGCTVLHVVAAHSPGYLVKRIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLP
KQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAA
VASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFID
KKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFK

--------------------------------------------------------------
>93754_93754_3_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000395734_length(transcript)=4528nt_BP=1023nt
CTTGGAATAGGTCTGCGGCTGCACACCGCCCGGACGCCGGGGTTCCTGCGTCCCCCGCCCCCTCTGATCGCGGCTGGGTAGCCGAGCCGC
AGGCAGCTGGGGGCCCCCGAACGCCGCCTCTGCATCGCGCCGCCCCTGCCCCGGGCTCCGGTAGCTTTCGGGCTTCCGCACTGCCCGCCG
CGCCCTGCCCACAGGGAAGCGCTTCCCCAGGCGGCGGCGGTCCTGGTGCGGACCCTCCGGCCGCAGCCATGTGGGACCCGCGGGCAGCTA
GGGTTCCCCCGAGGGACTTGGCTGTGCTGCTGTGCAACAAATCAAATGCATTTTTCAGCCTTGGGAAGTGGAATGAGGCATTTGTTGCTG
CCAAGGAATGTCTCCAATGGGATCCAACCTACGTGAAGGGATACTACCGAGCTGGTTATTCCTTGCTGAGGTTGCACCAGCCTTACGAAG
CCGCTCGCATGTTTTTTGAGGGTCTGCGACTTGTGCAGAGAAGCCAAGACCAGGCACCGGTTGCTGATTTCCTTGTTGGAGTCTTCACCA
CTATGAGCAGTGACTCCATTGTTTTGCAAAGTTTCTTGCCTTGCTTTGATCATATTTTCACAACTGGATTCCCAACAGAAGTGTGGCAAT
CTGTAATAGAAAAGTTGGCAAAGAAAGGATTATGGCATTCATTTCTGCTTCTGTCAGCAAAAAAAGACCGATTACCAAGAAATATTCATG
TCCCAGAGTTATCACTGAAAAGTCTCTTTGAGAAATACGTTTTCATTGGACTTTATGAGAAGATGGAACAAGTGCCCAAGTTAGTCCAGT
GGCTCATCTCCATTGGTGCAAGTGTTGAGACTATAGGACCGTATCCCCTTCATGCCCTCATGCGACTCTGTATCCAAGCCAGAGAAAACC
ATCTTTTCCGGTGGTTAATGGATCACAAGCCCGAGTGGAAAGGCCGCATTAACCAGAAGGATGGGGATGGCTGCACTGTCCTGCACGTCG
TCGCTGCCCACTCCCCAGGATACCTCGTTAAGCGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCA
CCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGA
AAGCCAAAACACAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAG
GCTTAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCA
TTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGA
CTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTG
CCATTAAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCA
CCAGTTCCATGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCT
CCCGGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCA
ATACTTCTGCTCCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAG
TAGAGAAAAAAACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGA
AACAACCTGCGGGGAAAGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGC
ATGTCCCTGGAGGTGGTAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCA
AGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATA
ATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACG
GGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACT
AGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
CCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGG
GAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAAC
CCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACC
GTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCC
CTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTAT
TTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACA
GGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGG
CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTC
TTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAA
CAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGA
TAGTAGGAAATCAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGG
AGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGA
TTCTTATTGCACTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAG
ATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTC
CTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGC
TGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACAC
CAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGC
TGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
CAGGAGACACCTCAGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGA
CGACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGG
TCAGAGTTCCCTCAAAGGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTG
GGGTGGGACATTTCTGTACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAGAGTA

>93754_93754_3_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000395734_length(amino acids)=770AA_BP=302
MHRAAPAPGSGSFRASALPAAPCPQGSASPGGGGPGADPPAAAMWDPRAARVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPT
YVKGYYRAGYSLLRLHQPYEAARMFFEGLRLVQRSQDQAPVADFLVGVFTTMSSDSIVLQSFLPCFDHIFTTGFPTEVWQSVIEKLAKKG
LWHSFLLLSAKKDRLPRNIHVPELSLKSLFEKYVFIGLYEKMEQVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHK
PEWKGRINQKDGDGCTVLHVVAAHSPGYLVKRIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLP
KQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAA
VASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFID
KKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIV
SKKVSYSHIQSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGA

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>93754_93754_4_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000426837_length(transcript)=4421nt_BP=1023nt
CTTGGAATAGGTCTGCGGCTGCACACCGCCCGGACGCCGGGGTTCCTGCGTCCCCCGCCCCCTCTGATCGCGGCTGGGTAGCCGAGCCGC
AGGCAGCTGGGGGCCCCCGAACGCCGCCTCTGCATCGCGCCGCCCCTGCCCCGGGCTCCGGTAGCTTTCGGGCTTCCGCACTGCCCGCCG
CGCCCTGCCCACAGGGAAGCGCTTCCCCAGGCGGCGGCGGTCCTGGTGCGGACCCTCCGGCCGCAGCCATGTGGGACCCGCGGGCAGCTA
GGGTTCCCCCGAGGGACTTGGCTGTGCTGCTGTGCAACAAATCAAATGCATTTTTCAGCCTTGGGAAGTGGAATGAGGCATTTGTTGCTG
CCAAGGAATGTCTCCAATGGGATCCAACCTACGTGAAGGGATACTACCGAGCTGGTTATTCCTTGCTGAGGTTGCACCAGCCTTACGAAG
CCGCTCGCATGTTTTTTGAGGGTCTGCGACTTGTGCAGAGAAGCCAAGACCAGGCACCGGTTGCTGATTTCCTTGTTGGAGTCTTCACCA
CTATGAGCAGTGACTCCATTGTTTTGCAAAGTTTCTTGCCTTGCTTTGATCATATTTTCACAACTGGATTCCCAACAGAAGTGTGGCAAT
CTGTAATAGAAAAGTTGGCAAAGAAAGGATTATGGCATTCATTTCTGCTTCTGTCAGCAAAAAAAGACCGATTACCAAGAAATATTCATG
TCCCAGAGTTATCACTGAAAAGTCTCTTTGAGAAATACGTTTTCATTGGACTTTATGAGAAGATGGAACAAGTGCCCAAGTTAGTCCAGT
GGCTCATCTCCATTGGTGCAAGTGTTGAGACTATAGGACCGTATCCCCTTCATGCCCTCATGCGACTCTGTATCCAAGCCAGAGAAAACC
ATCTTTTCCGGTGGTTAATGGATCACAAGCCCGAGTGGAAAGGCCGCATTAACCAGAAGGATGGGGATGGCTGCACTGTCCTGCACGTCG
TCGCTGCCCACTCCCCAGGATACCTCGTTAAGCGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCA
CCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGA
AAGCCAAAACACAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAG
GCTTAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCA
TTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGA
CTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTG
CCATTAAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCA
CCAGTTCCATGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCT
CCCGGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCA
ATACTTCTGCTCCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAG
TAGAGAAAAAAACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGA
AACAACCTGCGGGGAAAGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGC
ATGTCCCTGGAGGTGGTAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCA
AGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATA
ATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGG
AGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTG
ACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTG
TTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATG
CCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCC
CCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
CCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCA
CTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTT
TTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCG
AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGG
TGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATT
TTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCT
CAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGG
CAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTT
GTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGA
TAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATG
TCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATG
CCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCG
GGAACTGTATTGACACAAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTT
TGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGAC
TTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
GATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTC
CCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGA
CCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGG

>93754_93754_4_TRANK1-MAP4_TRANK1_chr3_36931320_ENST00000429976_MAP4_chr3_47919013_ENST00000426837_length(amino acids)=787AA_BP=302
MHRAAPAPGSGSFRASALPAAPCPQGSASPGGGGPGADPPAAAMWDPRAARVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPT
YVKGYYRAGYSLLRLHQPYEAARMFFEGLRLVQRSQDQAPVADFLVGVFTTMSSDSIVLQSFLPCFDHIFTTGFPTEVWQSVIEKLAKKG
LWHSFLLLSAKKDRLPRNIHVPELSLKSLFEKYVFIGLYEKMEQVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHK
PEWKGRINQKDGDGCTVLHVVAAHSPGYLVKRIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLP
KQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAA
VASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFID
KKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIV
SKKVSYSHIQSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGA

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Fusion Gene PPI Analysis for TRANK1-MAP4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for TRANK1-MAP4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for TRANK1-MAP4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource