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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:TRIOBP-SEPT9 (FusionGDB2 ID:94191)

Fusion Gene Summary for TRIOBP-SEPT9

check button Fusion gene summary
Fusion gene informationFusion gene name: TRIOBP-SEPT9
Fusion gene ID: 94191
HgeneTgene
Gene symbol

TRIOBP

SEPT9

Gene ID

11078

10801

Gene nameTRIO and F-actin binding proteinseptin 9
SynonymsDFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1
Cytomap

22q13.1

17q25.3

Type of geneprotein-codingprotein-coding
DescriptionTRIO and F-actin-binding proteinprotein Taratara-like proteintrio-associated repeat on actinseptin-9MLL septin-like fusion protein MSF-AOv/Br septinovarian/breast septinseptin D1
Modification date2020031320200328
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000403663, ENST00000406386, 
ENST00000407319, 		ENST00000592481, 
ENST00000427180, ENST00000541152, 
ENST00000590917, ENST00000591088, 
ENST00000592951, ENST00000329047, 
ENST00000423034, ENST00000427177, 
ENST00000427674, ENST00000431235, 
ENST00000449803, ENST00000585930, 
ENST00000588690, ENST00000590294, 
ENST00000591198, ENST00000592420, 
Fusion gene scores* DoF score10 X 9 X 7=63028 X 12 X 9=3024
# samples 927
** MAII scorelog2(9/630*10)=-2.8073549220576
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(27/3024*10)=-3.48542682717024
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TRIOBP [Title/Abstract] AND SEPT9 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointTRIOBP(38147835)-SEPT9(75478226), # samples:1
Anticipated loss of major functional domain due to fusion event.TRIOBP-SEPT9 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneTRIOBP

GO:1900026

positive regulation of substrate adhesion-dependent cell spreading

11148140


check buttonFusion gene breakpoints across TRIOBP (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across SEPT9 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-CD-8531-01ATRIOBPchr22

38147835

+SEPT9chr17

75478226

+


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Fusion Gene ORF analysis for TRIOBP-SEPT9

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000403663ENST00000592481TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-3UTRENST00000406386ENST00000592481TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-3UTRENST00000407319ENST00000592481TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000403663ENST00000427180TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000403663ENST00000541152TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000403663ENST00000590917TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000403663ENST00000591088TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000403663ENST00000592951TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000406386ENST00000427180TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000406386ENST00000541152TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000406386ENST00000590917TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000406386ENST00000591088TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000406386ENST00000592951TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000407319ENST00000427180TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000407319ENST00000541152TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000407319ENST00000590917TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000407319ENST00000591088TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
5CDS-5UTRENST00000407319ENST00000592951TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000329047TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000423034TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000427177TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000427674TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000431235TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000449803TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000585930TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000588690TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000590294TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000403663ENST00000591198TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000329047TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000423034TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000427177TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000427674TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000431235TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000449803TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000585930TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000588690TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000590294TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000406386ENST00000591198TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000329047TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000423034TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000427177TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000427674TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000431235TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000449803TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000585930TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000588690TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000590294TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
Frame-shiftENST00000407319ENST00000591198TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
In-frameENST00000403663ENST00000592420TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
In-frameENST00000406386ENST00000592420TRIOBPchr22

38147835

+SEPT9chr17

75478226

+
In-frameENST00000407319ENST00000592420TRIOBPchr22

38147835

+SEPT9chr17

75478226

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000406386TRIOBPchr2238147835+ENST00000592420SEPT9chr1775478226+7619563423157921853
ENST00000407319TRIOBPchr2238147835+ENST00000592420SEPT9chr1775478226+223525018671217
ENST00000403663TRIOBPchr2238147835+ENST00000592420SEPT9chr1775478226+223024513666217

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000406386ENST00000592420TRIOBPchr2238147835+SEPT9chr1775478226+0.0216597620.9783402
ENST00000407319ENST00000592420TRIOBPchr2238147835+SEPT9chr1775478226+0.336636220.6633638
ENST00000403663ENST00000592420TRIOBPchr2238147835+SEPT9chr1775478226+0.2935390.706461

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Fusion Genomic Features for TRIOBP-SEPT9


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
TRIOBPchr2238147835+SEPT9chr1775478225+8.58E-060.9999914
TRIOBPchr2238147835+SEPT9chr1775478225+8.58E-060.9999914

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for TRIOBP-SEPT9


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr22:38147835/chr17:75478226)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneSEPT9chr22:38147835chr17:75478226ENST00000329047111295_567222569.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000423034111295_567233580.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427177212295_567240587.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427180010295_567128475.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427674111295_56776423.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000431235212295_56776423.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000449803212295_56776423.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000541152010295_5670336.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000585930010295_56716363.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000588690112295_56776512.6666666666666DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000590294112295_567222354.3333333333333DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591088010295_5670336.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591198111295_567221568.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000592951010295_5670336.0DomainSeptin-type G
TgeneSEPT9chr22:38147835chr17:75478226ENST00000329047111445_453222569.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000423034111445_453233580.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427177212445_453240587.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427180010445_453128475.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427674111445_45376423.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000431235212445_45376423.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000449803212445_45376423.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000541152010445_4530336.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000585930010445_45316363.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000588690112445_45376512.6666666666666Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000590294112445_453222354.3333333333333Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591088010445_4530336.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591198111445_453221568.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000592951010445_4530336.0Nucleotide bindingGTP
TgeneSEPT9chr22:38147835chr17:75478226ENST00000329047111305_312222569.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000329047111362_365222569.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000329047111444_447222569.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000423034111305_312233580.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000423034111362_365233580.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000423034111444_447233580.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427177212305_312240587.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427177212362_365240587.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427177212444_447240587.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427180010305_312128475.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427180010362_365128475.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427180010444_447128475.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427674111305_31276423.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427674111362_36576423.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000427674111444_44776423.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000431235212305_31276423.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000431235212362_36576423.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000431235212444_44776423.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000449803212305_31276423.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000449803212362_36576423.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000449803212444_44776423.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000541152010305_3120336.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000541152010362_3650336.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000541152010444_4470336.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000585930010305_31216363.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000585930010362_36516363.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000585930010444_44716363.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000588690112305_31276512.6666666666666RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000588690112362_36576512.6666666666666RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000588690112444_44776512.6666666666666RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000590294112305_312222354.3333333333333RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000590294112362_365222354.3333333333333RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000590294112444_447222354.3333333333333RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591088010305_3120336.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591088010362_3650336.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591088010444_4470336.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591198111305_312221568.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591198111362_365221568.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000591198111444_447221568.0RegionG4 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000592951010305_3120336.0RegionG1 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000592951010362_3650336.0RegionG3 motif
TgeneSEPT9chr22:38147835chr17:75478226ENST00000592951010444_4470336.0RegionG4 motif

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTRIOBPchr22:38147835chr17:75478226ENST00000406386+12242062_224717933262.0Coiled coilOntology_term=ECO:0000255
HgeneTRIOBPchr22:38147835chr17:75478226ENST00000406386+12242281_236117933262.0Coiled coilOntology_term=ECO:0000255
HgeneTRIOBPchr22:38147835chr17:75478226ENST00000407319+282062_224780432.0Coiled coilOntology_term=ECO:0000255
HgeneTRIOBPchr22:38147835chr17:75478226ENST00000407319+282281_236180432.0Coiled coilOntology_term=ECO:0000255
HgeneTRIOBPchr22:38147835chr17:75478226ENST00000406386+12241778_188717933262.0DomainPH
HgeneTRIOBPchr22:38147835chr17:75478226ENST00000407319+281778_188780432.0DomainPH


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Fusion Gene Sequence for TRIOBP-SEPT9


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>94191_94191_1_TRIOBP-SEPT9_TRIOBP_chr22_38147835_ENST00000403663_SEPT9_chr17_75478226_ENST00000592420_length(transcript)=2230nt_BP=245nt
GTTTTATGGGCGGATGGAAGGGGCCGGGGCAGCGTCGGGGAAAGGAAGGGCCGGAGGCGCGGCGGCGGGCGGCCGAGAGGGGCGGCGGCG
GCGGCGGCGGCGGGGTTCCCGCGCCGCGGAGCCCGGCCCGAGAGCCGCGTCCACGTTCCTGCCTCCTGCTCCCGCCGCCCTGGGGCGCCG
CCATGACGCCCGATCTGCTCAACTTCAAGAAGGGATGGATGTCGATCTTGGACGAGCCTGGAGAGCCACTGAGGCGGCTCCCAGCTGCGT
TGGCGACATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGACTTCGGCTACGT
GGGGATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAACATCATGGTGGTCGGTGAGTCCTCACC
TTGCATGCCACTCAACCAATGCCGGAAACCAGCCTCAGCCCCCAGGGCGGCCCACAAGCCTTTGGGCTTGGTCTTCCCTTCTGTAAAATG
GGGCAGCAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCCTCCAGCGGCTC
CTCAGAGGGGCCTGTCCTGCACATCCAGGGCCCCTGAGATGACTTTGGGGAGCCCAGGCCGGCCTGGAGCAGGTCCTGATGAGTGGTCGC
TGCCTCTGAGCAATGACGTCAGCTTGTGCAGAGGGTTCTGTGGCAGCTGTCCCCTCACTGTTGCTCCAGCCTGGCCCTCCAGGCTCCCCA
CCGCACCCCACCGCACCCCGGCCAGAGGCTTCCCAGCAGCTCAGCTTCAGCTCTGCCCTGGAATTGGGGCCTCGTGGCTTCCACACCCCC
TGGTGGCCCCGGAGAGCTGGAGGTCACCACGGGAGGTCGTCGATCAGCACGACCTGGGCAGGGTGAGGGGGCCAGGCTGGAGTCTACAGT
GGGCCGCCTGTTGTTTCCAAAGCCCCCCAGGTCCCATTCAAACCTCACAGGGACCCTGTGAAGGGGGCGTCCCGTTTTCCAGGCAGAAGC
GAGGCTCAGGGAAGGCTGCCAAGGTTCCTTAGCTCACAGGGCAGAGAACCGCAGCCACCGTTTTGACTCCCAGAACTGTGTTCTGCCCAC
TCCACGGGGTCCAGGGAGGGGTCTGGGGAAGTGCCCCCGCCAGGTCACACCCTAAACAAAGGTGAGCTTGCGGGGTTTCTGCAAGGTGTC
TGGGCACCTCTCAGGCCGGGCCTGTTTCTCTGACCTTTGCCAGCCGTGCACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCACACCT
GCCAGCCCGACACCTTTCTTTCCTCTTCTGCACTGATCTGGGCCCTGGCTCCCCTGGGGTCTTGGTGTCCTCTCTGCTTCCTGTAGCCTC
ATGGGACCCGGCTGCTCATGGCCCTGCTGTGCTCACAGCTGCCTGGAAGCTGGCAGCCTGCTTCAAGGGAGGGCGGAGGTGTGGGGTCCC
CTCCTACGGCCCCCACCCTGTTCTGCCTGTTGTGGGGGACGTGCTTGTACCCTGAGGATTCAGGGCTGCCTCCCGGGAAGATGGCTGGAG
AGAAAGAGAGGGGAGAGGCCCAAAGGCAGTGGCCAGGCTGGGACTCATCTCTGTGGGCTACGGAGGGGCTGCCCTGCTCCCTAGCCAGGG
ACAGGGTGAGAAGGACCTGGGAACCTCTGCGTCCCAGCCATGGCACAGGCCTTCTTCCGGAGCTTTGGCCCCAAGGAGAGGGAGAGGCAG
CCCAGCAGCCCTCGCCTTCCGTGGCTGCCACTGTGACAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCT
CTTCGCCCTTTCAACCCTGAGAAGAACAGTGGTCCTGATTCCCCACAAAATCACTCCCTCCCAGGGATGCCGAGTGAGGAACAAGACGTG
GGGCAGCTCTGCTCTCCTCCCTCCTCCCTCCCATGGCAGCTGTGCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGCACCTGTTTGGAG
GTCCACAGACCCCGGGGAGAATCCCAGCTTTGTCCTAACTCAGCGGGGTGAGGCTTGTGTGTCTTCCCCTGGGCTCCTCCTCTGTGAGCC

>94191_94191_1_TRIOBP-SEPT9_TRIOBP_chr22_38147835_ENST00000403663_SEPT9_chr17_75478226_ENST00000592420_length(amino acids)=217AA_BP=72
MEGAGAASGKGRAGGAAAGGREGRRRRRRRGSRAAEPGPRAASTFLPPAPAALGRRHDARSAQLQEGMDVDLGRAWRATEAAPSCVGDMA
DTPRDAGLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGESSPCMPLNQCRKPASAPRAAHKPLGLVFPSVKWGSNP

--------------------------------------------------------------
>94191_94191_2_TRIOBP-SEPT9_TRIOBP_chr22_38147835_ENST00000406386_SEPT9_chr17_75478226_ENST00000592420_length(transcript)=7619nt_BP=5634nt
ATCGCTCTGATTCATTGTTAAAATAAAGAGGCCATGACCCTGGCACTCCCACCCCGGCAGCCCCTGTGCGTGGAAACCCAGCCAAGGTCT
GATGATGGAGGAGCCTTGGCCCTGGCTGTCCCAGGGGAGGAGGTGAAATTCCTCAGCTCTCCACCAAGATTGGCCACAAAAGCCTGATCC
CCTGGAACACAGCAGGCCTCACATAGACGGTCAGCCATTGGATCATAGGAACTGCCCTGGCCTGACTCACCCAATATGGAGGAGGTGCCT
GGGGATGCCCTGTGTGAACACTTTGAGGCCAACATACTTACCCAGAACCGCTGTCAAAACTGCTTCCACCCTGAGGAGGCCCATGGAGCA
AGATACCAGGAGCTCAGGAGCCCTTCAGGTGCTGAGGTGCCCTACTGCGACCTGCCTCGATGTCCACCTGCCCCTGAGGACCCACTCAGC
GCCTCAACCTCCGGCTGCCAGTCTGTGGTGGACCCAGGCCTCAGGCCAGGGCCCAAGAGGGGCCCATCCCCCTCAGCAGGGCTCCCAGAA
GAGGGTCCCACAGCTGCCCCCAGGAGCAGGAGCCGGGAGCTTGAGGCAGTACCCTATCTGGAGGGCCTGACCACTTCCTTGTGTGGCAGC
TGCAACGAGGACCCCGGCTCTGACCCCACCTCCAGCCCTGACTCCGCCACCCCTGATGATACCAGCAACTCGTCCTCTGTGGACTGGGAC
ACTGTTGAGAGGCAGGAGGAGGAGGCCCCCAGCTGGGACGAGCTCGCAGTGATGATCCCGAGGAGGCCTCGGGAGGGGCCGAGAGCTGAC
AGCTCCCAAAGGGCTCCGTCTCTCCTCACCAGGTCCCCTGTGGGAGGAGATGCTGCAGGCCAGAAAAAGGAGGACACCGGCGGTGGGGGC
CGGAGCGCAGGACAGCACTGGGCAAGGCTCCGGGGAGAAAGCGGGTTGTCCCTGGAGCGGCACCGGTCAACACTGACCCAGGCTTCCTCC
ATGACACCACACAGTGGACCTCGAAGCACCACGTCTCAGGCTTCTCCTGCCCAAAGGGACACTGCTCAGGCTGCCTCTACACGTGAAATC
CCCAGAGCCTCCTCTCCCCATCGAATCACCCAAAGGGACACCTCCAGGGCCTCATCCACCCAACAGGAAATCTCCAGGGCCTCATCCACC
CAACAGGAAACCTCCAGGGCCTCATCCACCCAAGAGGACACCCCTAGGGCCTCATCCACCCAAGAGGACACCCCCAGGGCCTCATCTACA
CAGTGGAACACCCCCAGAGCTTCCTCTCCCTCACGAAGCACCCAACTGGATAACCCCAGAACCTCTTCTACCCAGCAGGACAACCCCCAA
ACTTCTTTTCCTACTTGTACTCCCCAGCGGGAAAACCCCAGGACACCCTGTGTCCAGCAGGACGATCCCAGAGCCTCCTCTCCCAACAGA
ACCACTCAACGAGAGAATTCCAGAACATCCTGTGCCCAGCGGGACAATCCCAAAGCCTCCAGAACCTCCTCTCCCAATAGAGCCACACGA
GACAACCCCAGAACATCCTGCGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCCAGTAGAGCTACACGAGACAACCCCACAACATCCTGT
GCCCAGCGGGACAATCCCAGAGCCTCCAGAACCTCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAACATCCTGTGCCCAGCGGGAC
AATCCCAGAGCCTCCTCTCCCAGTAGAGCTACACGAGACAACCCCACAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCAGAACC
TCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAACATCCTGCGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCCAATAGAGCTGCA
CGAGACAACCCCACAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCAGAACCTCCTCTCCCAATAGAGCCACACGAGACAACCCC
AGAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCCAATAGAGCTACACGAGACAACCCCACAACATCCTGTGCCCAGCGG
GACAATCCCAGAGCCTCCAGAACCTCCTCTCCCAATAGAGCCACACGAGATAACCCCAGAACATCCTGTGCCCAGCGGGACAATCCCAGA
GCCTCCTCTCCCAACAGAACCACCCAACAAGACAGCCCCAGAACATCCTGTGCCCGACGGGACGATCCCAGAGCCTCCTCTCCTAACAGA
ACCATCCAACAAGAGAACCCCAGAACATCCTGTGCCCTACGGGACAATCCCAGAGCCTCCTCTCCCAGCAGAACCATCCAACAAGAGAAC
CCCAGAACATCCTGTGCCCAACGGGACGATCCCAGAGCCTCCTCTCCTAACAGAACCACCCAACAAGAGAACCCCAGAACATCCTGTGCC
CGACGGGACAATCCCAGAGCCTCCTCTCGCAACAGAACCATCCAGCGAGACAACCCCAGAACATCCTGTGCCCAGCGGGACAATCCCAGA
GCCTCCTCTCCTAACAGAACCATCCAACAAGAGAACCTCAGAACATCCTGTACCCGACAGGACAATCCCAGGACCTCCTCTCCCAATAGA
GCCACACGAGACAACCCCAGAACATCCTGTGCCCAGCGGGACAATCTCAGAGCCTCCTCTCCCATCAGAGCCACCCAACAGGACAACCCC
AGAACTTGTATTCAACAGAACATCCCCAGATCATCTTCTACCCAACAAGACAACCCTAAAACCTCTTGTACCAAACGAGATAACCTCAGA
CCCACTTGTACACAGCGGGACCGCACACAGTCCTTTTCCTTTCAACGAGACAACCCTGGAACCTCCTCATCTCAATGCTGCACCCAAAAG
GAGAATCTGAGACCATCATCTCCCCACCGCTCCACTCAATGGAACAATCCCAGGAATTCATCTCCCCATCGTACTAACAAAGACATCCCC
TGGGCCTCGTTTCCCCTCCGGCCAACTCAGAGTGATGGTCCCCGAACCTCTTCCCCATCTCGCTCCAAGCAAAGCGAGGTTCCCTGGGCA
TCCATCGCCCTCCGGCCAACCCAAGGTGACAGGCCTCAGACATCCTCTCCCAGCAGGCCAGCCCAGCATGACCCACCCCAGTCCTCCTTT
GGCCCCACCCAGTACAACTTGCCATCCCGGGCCACCTCTTCCTCCCATAACCCAGGCCACCAGAGCACCTCCCGAACTTCCTCACCTGTG
TACCCCGCTGCCTATGGGGCTCCCCTGACCTCTCCTGAGCCCTCCCAGCCTCCATGTGCTGTGTGCATTGGGCACCGGGATGCCCCTCGA
GCCTCTTCGCCCCCTCGCTATTTGCAGCACGACCCCTTCCCCTTCTTCCCAGAGCCCCGCGCCCCTGAGAGTGAACCGCCCCACCACGAG
CCTCCCTATATACCACCTGCTGTGTGCATTGGACACCGAGATGCCCCCCGGGCGTCCTCGCCCCCCCGCCACACCCAATTTGACCCCTTC
CCCTTCCTCCCAGACACATCAGATGCCGAGCATCAGTGTCAGTCCCCCCAACACGAGCCCCTTCAGCTCCCTGCACCTGTGTGTATTGGG
TACCGAGATGCACCCCGGGCCTCCTCCCCACCACGCCAGGCCCCAGAGCCTTCCCTCTTATTCCAGGACCTCCCCAGGGCCAGCACAGAG
AGCCTTGTCCCTTCCATGGACTCTCTGCACGAGTGCCCCCACATCCCCACCCCTGTGTGCATTGGGCACCGGGATGCACCCTCCTTCTCA
TCCCCACCACGCCAGGCTCCTGAGCCATCCCTCTTCTTCCAGGATCCCCCTGGAACTAGTATGGAGAGCCTGGCCCCCTCCACTGACTCT
CTGCATGGCTCCCCAGTGCTGATCCCCCAAGTGTGCATCGGGCACCGGGATGCACCCCGAGCCTCCTCCCCACCCCGCCACCCACCCAGT
GACCTAGCGTTCCTGGCACCCTCACCTTCACCGGGCAGCTCTGGGGGCTCCCGGGGCTCAGCGCCTCCCGGGGAGACCAGGCACAACTTG
GAGCGGGAGGAGTACACTGTGCTGGCCGACCTGCCCCCACCCAGGAGGCTGGCCCAGAGACAGCCAGGGCCCCAGGCGCAGTGCAGCAGC
GGGGGCCGCACCCACAGCCCTGGCCGTGCAGAGGTGGAGCGCCTCTTCGGGCAAGAGCGCAGGAAGTCCGAGGCAGCGGGGGCCTTCCAG
GCCCAGGACGAGGGACGGTCACAGCAGCCCAGCCAAGGCCAGAGCCAACTTCTCCGAAGACAGTCCAGCCCTGCCCCCAGCAGGCAGGTG
ACCATGCTCCCTGCCAAACAGGCAGAACTGACCCGGCGGAGCCAAGCAGAGCCCCCTCATCCTTGGAGTCCTGAGAAGAGACCTGAGGGA
GATCGGCAGCTCCAGGGGTCCCCGCTGCCCCCCAGGACATCAGCCAGGACCCCTGAGAGGGAGCTGCGGACACAGAGACCTCTGGAGAGT
GGCCAAGCAGGCCCAAGACAGCCTCTGGGGGTGTGGCAGAGTCAGGAGGAACCGCCAGGGTCCCAGGGCCCTCATAGACACCTAGAAAGG
AGCTGGAGCAGCCAGGAGGGAGGCCTGGGCCCTGGGGGCTGGTGGGGATGTGGAGAGCCCAGCCTGGGGGCAGCCAAAGCCCCGGAGGGA
GCATGGGGGGGCACTTCCAGGGAGTACAAGGAGAGCTGGGGGCAGCCAGAGGCCTGGGAGGAGAAGCCCACTCATGAGCTCCCCAGAGAA
CTAGGAAAGAGAAGCCCACTCACGAGCCCCCCTGAGAACTGGGGAGGCCCCGCAGAGTCCTCACAATCCTGGCACTCTGGGACACCCACT
GCTGTGGGCTGGGGGGCAGAGGGAGCGTGTCCATACCCGCGTGGCTCTGAGAGGCGACCCGAGCTTGACTGGAGGGATCTGCTTGGCCTT
CTCCGGGCACCAGGAGAGGGGGTCTGGGCCCGTGTCCCCAGCCTGGACTGGGAGGGCCTCTTGGAGCTCCTGCAGGCCAGGCTGCCCCGC
AAGGACCCAGCTGGACACAGGGATGACCTGGCCAGGGCTTTAGGGCCAGAGCTGGGTCCCCCAGGCACAAACGATGTCCCTGAGCAGGAG
TCACACAGCCAGCCAGAAGGCTGGGCCGAGGCCACCCCAGTCAATGGACACAGCCCCGCACTGCAGTCCCAGAGCCCGGTCCAGCTGCCC
AGCCCTGCCTGCACCTCCACCCAGTGGCCAAAGATCAAAGTGACAAGAGGACCAGCGACCGCAACTCTGGCAGGCCTGGAGCAGACGGGC
CCCCTGGGGAGCAGGAGCACTGCGAAGGGCCCCAGCTTGCCAGAGCTGCAGTTCCAACCAGAGGAGCCTGAGGAGTCAGAACCAAGCAGA
GGCCAAGACCCCCTGACTGACCAGAAGCAGGCAGACTCGGCAGACAAGAGGCCAGCAGAGGGCAAGGCTGGGAGCCCGCTCAAGGGCCGA
CTGGTGACCTCATGGCGGATGCCCGGGGACCGGCCCACGCTGTTCAATCCGTTCCTGCTGTCTCTGGGGGTCCTCAGGTGGCGAAGGCCC
GATCTGCTCAACTTCAAGAAGGGATGGATGTCGATCTTGGACGAGCCTGGAGAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGG
CCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGACTTCGGCTACGTGGGGATTGACT
CCATCCTGGAGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAACATCATGGTGGTCGGTGAGTCCTCACCTTGCATGCCAC
TCAACCAATGCCGGAAACCAGCCTCAGCCCCCAGGGCGGCCCACAAGCCTTTGGGCTTGGTCTTCCCTTCTGTAAAATGGGGCAGCAACC
CTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCCTCCAGCGGCTCCTCAGAGGGGC
CTGTCCTGCACATCCAGGGCCCCTGAGATGACTTTGGGGAGCCCAGGCCGGCCTGGAGCAGGTCCTGATGAGTGGTCGCTGCCTCTGAGC
AATGACGTCAGCTTGTGCAGAGGGTTCTGTGGCAGCTGTCCCCTCACTGTTGCTCCAGCCTGGCCCTCCAGGCTCCCCACCGCACCCCAC
CGCACCCCGGCCAGAGGCTTCCCAGCAGCTCAGCTTCAGCTCTGCCCTGGAATTGGGGCCTCGTGGCTTCCACACCCCCTGGTGGCCCCG
GAGAGCTGGAGGTCACCACGGGAGGTCGTCGATCAGCACGACCTGGGCAGGGTGAGGGGGCCAGGCTGGAGTCTACAGTGGGCCGCCTGT
TGTTTCCAAAGCCCCCCAGGTCCCATTCAAACCTCACAGGGACCCTGTGAAGGGGGCGTCCCGTTTTCCAGGCAGAAGCGAGGCTCAGGG
AAGGCTGCCAAGGTTCCTTAGCTCACAGGGCAGAGAACCGCAGCCACCGTTTTGACTCCCAGAACTGTGTTCTGCCCACTCCACGGGGTC
CAGGGAGGGGTCTGGGGAAGTGCCCCCGCCAGGTCACACCCTAAACAAAGGTGAGCTTGCGGGGTTTCTGCAAGGTGTCTGGGCACCTCT
CAGGCCGGGCCTGTTTCTCTGACCTTTGCCAGCCGTGCACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCACACCTGCCAGCCCGAC
ACCTTTCTTTCCTCTTCTGCACTGATCTGGGCCCTGGCTCCCCTGGGGTCTTGGTGTCCTCTCTGCTTCCTGTAGCCTCATGGGACCCGG
CTGCTCATGGCCCTGCTGTGCTCACAGCTGCCTGGAAGCTGGCAGCCTGCTTCAAGGGAGGGCGGAGGTGTGGGGTCCCCTCCTACGGCC
CCCACCCTGTTCTGCCTGTTGTGGGGGACGTGCTTGTACCCTGAGGATTCAGGGCTGCCTCCCGGGAAGATGGCTGGAGAGAAAGAGAGG
GGAGAGGCCCAAAGGCAGTGGCCAGGCTGGGACTCATCTCTGTGGGCTACGGAGGGGCTGCCCTGCTCCCTAGCCAGGGACAGGGTGAGA
AGGACCTGGGAACCTCTGCGTCCCAGCCATGGCACAGGCCTTCTTCCGGAGCTTTGGCCCCAAGGAGAGGGAGAGGCAGCCCAGCAGCCC
TCGCCTTCCGTGGCTGCCACTGTGACAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTTT
CAACCCTGAGAAGAACAGTGGTCCTGATTCCCCACAAAATCACTCCCTCCCAGGGATGCCGAGTGAGGAACAAGACGTGGGGCAGCTCTG
CTCTCCTCCCTCCTCCCTCCCATGGCAGCTGTGCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGCACCTGTTTGGAGGTCCACAGACC
CCGGGGAGAATCCCAGCTTTGTCCTAACTCAGCGGGGTGAGGCTTGTGTGTCTTCCCCTGGGCTCCTCCTCTGTGAGCCTTAGCTTCCTC

>94191_94191_2_TRIOBP-SEPT9_TRIOBP_chr22_38147835_ENST00000406386_SEPT9_chr17_75478226_ENST00000592420_length(amino acids)=1853AA_BP=1801
MPWPDSPNMEEVPGDALCEHFEANILTQNRCQNCFHPEEAHGARYQELRSPSGAEVPYCDLPRCPPAPEDPLSASTSGCQSVVDPGLRPG
PKRGPSPSAGLPEEGPTAAPRSRSRELEAVPYLEGLTTSLCGSCNEDPGSDPTSSPDSATPDDTSNSSSVDWDTVERQEEEAPSWDELAV
MIPRRPREGPRADSSQRAPSLLTRSPVGGDAAGQKKEDTGGGGRSAGQHWARLRGESGLSLERHRSTLTQASSMTPHSGPRSTTSQASPA
QRDTAQAASTREIPRASSPHRITQRDTSRASSTQQEISRASSTQQETSRASSTQEDTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLD
NPRTSSTQQDNPQTSFPTCTPQRENPRTPCVQQDDPRASSPNRTTQRENSRTSCAQRDNPKASRTSSPNRATRDNPRTSCAQRDNPRASS
PSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQ
RDNPRASSPNRAARDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRATRDNPTTSCAQRDNPRASRTSSPNRATRD
NPRTSCAQRDNPRASSPNRTTQQDSPRTSCARRDDPRASSPNRTIQQENPRTSCALRDNPRASSPSRTIQQENPRTSCAQRDDPRASSPN
RTTQQENPRTSCARRDNPRASSRNRTIQRDNPRTSCAQRDNPRASSPNRTIQQENLRTSCTRQDNPRTSSPNRATRDNPRTSCAQRDNLR
ASSPIRATQQDNPRTCIQQNIPRSSSTQQDNPKTSCTKRDNLRPTCTQRDRTQSFSFQRDNPGTSSSQCCTQKENLRPSSPHRSTQWNNP
RNSSPHRTNKDIPWASFPLRPTQSDGPRTSSPSRSKQSEVPWASIALRPTQGDRPQTSSPSRPAQHDPPQSSFGPTQYNLPSRATSSSHN
PGHQSTSRTSSPVYPAAYGAPLTSPEPSQPPCAVCIGHRDAPRASSPPRYLQHDPFPFFPEPRAPESEPPHHEPPYIPPAVCIGHRDAPR
ASSPPRHTQFDPFPFLPDTSDAEHQCQSPQHEPLQLPAPVCIGYRDAPRASSPPRQAPEPSLLFQDLPRASTESLVPSMDSLHECPHIPT
PVCIGHRDAPSFSSPPRQAPEPSLFFQDPPGTSMESLAPSTDSLHGSPVLIPQVCIGHRDAPRASSPPRHPPSDLAFLAPSPSPGSSGGS
RGSAPPGETRHNLEREEYTVLADLPPPRRLAQRQPGPQAQCSSGGRTHSPGRAEVERLFGQERRKSEAAGAFQAQDEGRSQQPSQGQSQL
LRRQSSPAPSRQVTMLPAKQAELTRRSQAEPPHPWSPEKRPEGDRQLQGSPLPPRTSARTPERELRTQRPLESGQAGPRQPLGVWQSQEE
PPGSQGPHRHLERSWSSQEGGLGPGGWWGCGEPSLGAAKAPEGAWGGTSREYKESWGQPEAWEEKPTHELPRELGKRSPLTSPPENWGGP
AESSQSWHSGTPTAVGWGAEGACPYPRGSERRPELDWRDLLGLLRAPGEGVWARVPSLDWEGLLELLQARLPRKDPAGHRDDLARALGPE
LGPPGTNDVPEQESHSQPEGWAEATPVNGHSPALQSQSPVQLPSPACTSTQWPKIKVTRGPATATLAGLEQTGPLGSRSTAKGPSLPELQ
FQPEEPEESEPSRGQDPLTDQKQADSADKRPAEGKAGSPLKGRLVTSWRMPGDRPTLFNPFLLSLGVLRWRRPDLLNFKKGWMSILDEPG

--------------------------------------------------------------
>94191_94191_3_TRIOBP-SEPT9_TRIOBP_chr22_38147835_ENST00000407319_SEPT9_chr17_75478226_ENST00000592420_length(transcript)=2235nt_BP=250nt
AAAAAGTTTTATGGGCGGATGGAAGGGGCCGGGGCAGCGTCGGGGAAAGGAAGGGCCGGAGGCGCGGCGGCGGGCGGCCGAGAGGGGCGG
CGGCGGCGGCGGCGGCGGGGTTCCCGCGCCGCGGAGCCCGGCCCGAGAGCCGCGTCCACGTTCCTGCCTCCTGCTCCCGCCGCCCTGGGG
CGCCGCCATGACGCCCGATCTGCTCAACTTCAAGAAGGGATGGATGTCGATCTTGGACGAGCCTGGAGAGCCACTGAGGCGGCTCCCAGC
TGCGTTGGCGACATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGACTTCGGC
TACGTGGGGATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAACATCATGGTGGTCGGTGAGTCC
TCACCTTGCATGCCACTCAACCAATGCCGGAAACCAGCCTCAGCCCCCAGGGCGGCCCACAAGCCTTTGGGCTTGGTCTTCCCTTCTGTA
AAATGGGGCAGCAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCCTCCAGC
GGCTCCTCAGAGGGGCCTGTCCTGCACATCCAGGGCCCCTGAGATGACTTTGGGGAGCCCAGGCCGGCCTGGAGCAGGTCCTGATGAGTG
GTCGCTGCCTCTGAGCAATGACGTCAGCTTGTGCAGAGGGTTCTGTGGCAGCTGTCCCCTCACTGTTGCTCCAGCCTGGCCCTCCAGGCT
CCCCACCGCACCCCACCGCACCCCGGCCAGAGGCTTCCCAGCAGCTCAGCTTCAGCTCTGCCCTGGAATTGGGGCCTCGTGGCTTCCACA
CCCCCTGGTGGCCCCGGAGAGCTGGAGGTCACCACGGGAGGTCGTCGATCAGCACGACCTGGGCAGGGTGAGGGGGCCAGGCTGGAGTCT
ACAGTGGGCCGCCTGTTGTTTCCAAAGCCCCCCAGGTCCCATTCAAACCTCACAGGGACCCTGTGAAGGGGGCGTCCCGTTTTCCAGGCA
GAAGCGAGGCTCAGGGAAGGCTGCCAAGGTTCCTTAGCTCACAGGGCAGAGAACCGCAGCCACCGTTTTGACTCCCAGAACTGTGTTCTG
CCCACTCCACGGGGTCCAGGGAGGGGTCTGGGGAAGTGCCCCCGCCAGGTCACACCCTAAACAAAGGTGAGCTTGCGGGGTTTCTGCAAG
GTGTCTGGGCACCTCTCAGGCCGGGCCTGTTTCTCTGACCTTTGCCAGCCGTGCACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCA
CACCTGCCAGCCCGACACCTTTCTTTCCTCTTCTGCACTGATCTGGGCCCTGGCTCCCCTGGGGTCTTGGTGTCCTCTCTGCTTCCTGTA
GCCTCATGGGACCCGGCTGCTCATGGCCCTGCTGTGCTCACAGCTGCCTGGAAGCTGGCAGCCTGCTTCAAGGGAGGGCGGAGGTGTGGG
GTCCCCTCCTACGGCCCCCACCCTGTTCTGCCTGTTGTGGGGGACGTGCTTGTACCCTGAGGATTCAGGGCTGCCTCCCGGGAAGATGGC
TGGAGAGAAAGAGAGGGGAGAGGCCCAAAGGCAGTGGCCAGGCTGGGACTCATCTCTGTGGGCTACGGAGGGGCTGCCCTGCTCCCTAGC
CAGGGACAGGGTGAGAAGGACCTGGGAACCTCTGCGTCCCAGCCATGGCACAGGCCTTCTTCCGGAGCTTTGGCCCCAAGGAGAGGGAGA
GGCAGCCCAGCAGCCCTCGCCTTCCGTGGCTGCCACTGTGACAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTG
GGCCTCTTCGCCCTTTCAACCCTGAGAAGAACAGTGGTCCTGATTCCCCACAAAATCACTCCCTCCCAGGGATGCCGAGTGAGGAACAAG
ACGTGGGGCAGCTCTGCTCTCCTCCCTCCTCCCTCCCATGGCAGCTGTGCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGCACCTGTT
TGGAGGTCCACAGACCCCGGGGAGAATCCCAGCTTTGTCCTAACTCAGCGGGGTGAGGCTTGTGTGTCTTCCCCTGGGCTCCTCCTCTGT

>94191_94191_3_TRIOBP-SEPT9_TRIOBP_chr22_38147835_ENST00000407319_SEPT9_chr17_75478226_ENST00000592420_length(amino acids)=217AA_BP=72
MEGAGAASGKGRAGGAAAGGREGRRRRRRRGSRAAEPGPRAASTFLPPAPAALGRRHDARSAQLQEGMDVDLGRAWRATEAAPSCVGDMA
DTPRDAGLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGESSPCMPLNQCRKPASAPRAAHKPLGLVFPSVKWGSNP

--------------------------------------------------------------

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Fusion Gene PPI Analysis for TRIOBP-SEPT9


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for TRIOBP-SEPT9


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for TRIOBP-SEPT9


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource