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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:UBP1-TRIM71 (FusionGDB2 ID:96394) |
Fusion Gene Summary for UBP1-TRIM71 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: UBP1-TRIM71 | Fusion gene ID: 96394 | Hgene | Tgene | Gene symbol | UBP1 | TRIM71 | Gene ID | 7342 | 131405 |
| Gene name | upstream binding protein 1 | tripartite motif containing 71 | |
| Synonyms | LBP-1B|LBP-1a|LBP1A|LBP1B | HYDCC1|LIN-41|LIN41 | |
| Cytomap | 3p22.3 | 3p22.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | upstream-binding protein 1transcription factor LBP-1 | E3 ubiquitin-protein ligase TRIM71RING-type E3 ubiquitin transferase TRIM71abnormal cell LINeage LIN-41homolog of C. elegans Lin-41protein lin-41 homologtripartite motif containing 71, E3 ubiquitin protein ligasetripartite motif-containing protein 7 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000283628, ENST00000283629, ENST00000447368, ENST00000486388, | ENST00000383763, | |
| Fusion gene scores | * DoF score | 8 X 8 X 6=384 | 5 X 5 X 2=50 |
| # samples | 9 | 5 | |
| ** MAII score | log2(9/384*10)=-2.09310940439148 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/50*10)=0 | |
| Context | PubMed: UBP1 [Title/Abstract] AND TRIM71 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | UBP1(33481228)-TRIM71(32915310), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | UBP1-TRIM71 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. UBP1-TRIM71 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | TRIM71 | GO:0017148 | negative regulation of translation | 23125361 |
| Tgene | TRIM71 | GO:0061158 | 3'-UTR-mediated mRNA destabilization | 23125361 |
| Fusion gene breakpoints across UBP1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across TRIM71 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | SARC | TCGA-MB-A8JK-01A | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + |
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Fusion Gene ORF analysis for UBP1-TRIM71 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000283628 | ENST00000383763 | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + |
| In-frame | ENST00000283629 | ENST00000383763 | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + |
| In-frame | ENST00000447368 | ENST00000383763 | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + |
| intron-3CDS | ENST00000486388 | ENST00000383763 | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000283629 | UBP1 | chr3 | 33481228 | - | ENST00000383763 | TRIM71 | chr3 | 32915310 | + | 8413 | 643 | 484 | 2397 | 637 |
| ENST00000447368 | UBP1 | chr3 | 33481228 | - | ENST00000383763 | TRIM71 | chr3 | 32915310 | + | 8045 | 275 | 116 | 2029 | 637 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000283629 | ENST00000383763 | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + | 0.000241664 | 0.9997583 |
| ENST00000447368 | ENST00000383763 | UBP1 | chr3 | 33481228 | - | TRIM71 | chr3 | 32915310 | + | 0.000223376 | 0.99977666 |
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Fusion Genomic Features for UBP1-TRIM71 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| UBP1 | chr3 | 33481227 | - | TRIM71 | chr3 | 32915309 | + | 6.67E-05 | 0.99993336 |
| UBP1 | chr3 | 33481227 | - | TRIM71 | chr3 | 32915309 | + | 6.67E-05 | 0.99993336 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for UBP1-TRIM71 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:33481228/chr3:32915310) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 391_427 | 284 | 869.0 | Coiled coil | Ontology_term=ECO:0000255 | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 479_580 | 284 | 869.0 | Repeat | Note=Filamin | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 593_636 | 284 | 869.0 | Repeat | Note=NHL 1 | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 640_683 | 284 | 869.0 | Repeat | Note=NHL 2 | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 687_730 | 284 | 869.0 | Repeat | Note=NHL 3 | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 734_777 | 284 | 869.0 | Repeat | Note=NHL 4 | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 781_824 | 284 | 869.0 | Repeat | Note=NHL 5 | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 828_868 | 284 | 869.0 | Repeat | Note=NHL 6 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 146_157 | 284 | 869.0 | Compositional bias | Note=His-rich | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 26_42 | 284 | 869.0 | Compositional bias | Note=Ser-rich | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 12_95 | 284 | 869.0 | Zinc finger | RING-type | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 194_241 | 284 | 869.0 | Zinc finger | B box-type 1%3B atypical | |
| Tgene | TRIM71 | chr3:33481228 | chr3:32915310 | ENST00000383763 | 0 | 4 | 273_314 | 284 | 869.0 | Zinc finger | B box-type 2 |
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Fusion Gene Sequence for UBP1-TRIM71 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >96394_96394_1_UBP1-TRIM71_UBP1_chr3_33481228_ENST00000283629_TRIM71_chr3_32915310_ENST00000383763_length(transcript)=8413nt_BP=643nt GTCGCGTTGAAGCCAGCGTCCGGCCGGCAGAGCGGCGTCGGCGGGGTTGGCCGGGGCGGTGTGGCGCTAGAGCCTGGGCGGGCCGGGGGC AAGGAGTCAAGGCTTGGGGGCGGGTGACGGGCGGGCGGAGGGCTTGCCCCCGTGTGGTCCTCGGAGCGGCCCGAGGTCCAGCCTCCCAGC GGTCCCGGAGGAGGATGCGACCGGGGGGCCCCGGGCGGGGCGGTCGGCGGCGGCTGCAGCGCTAGCGGCGCGGGGGCTGGGCGGCGGCGC CGGCATGAGGCGCAGGGCCGGTGTCCGCGGGAGGGTGGCGCTGCCGGCGGCCCGGCCGCTCCCGCTGCAATTGCTCGCTGGGCTCGTCGT GCCCTGCCAGTGGGGCCCCCGCAGCTCTCGTCCCGGCCGCCGCTGGTGACCACTCGCCGCCCCTCCGGAGGCTTCACCCGCGCCCTCCCC CAGGACGCGCCAGCGGAGCTCCGGCTCCTTCGCCCTGGACGCGGAGGCCGCGGTGTGCGGGGCGACGGCGAGGCCGGAAGATGGCCTGGG TGCTCAAGATGGACGAGGTGATCGAGTCCGGGCTGGTGCACGACTTCGACGCCAGCCTCTCGGGCATCGGGCAGGAACTGGGCGCCGGCG CTTACAGCATGAGGTGCTGCACCTGTACTGTGACACTTGCTCTGTACCCATCTGTCGTGAGTGCACAATGGGCCGGCATGGGGGCCACAG CTTCATCTACCTCCAGGAGGCACTGCAGGACTCACGGGCACTCACCATCCAGCTGCTGGCAGATGCCCAGCAGGGACGACAGGCAATCCA GCTGAGCATCGAGCAGGCCCAGACGGTGGCGGAACAGGTGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAG GCATAAGAAAGCCCTGGAGGAACGCGAGTGTGAGCTGCTGTGGAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCA GGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGGTAGAGCGCTAGACAT CCTACTGGCCCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTGAAGACCGTGCGGAGCCTCCTGCAGCCCCAGGAAGACGACCGAGTCAT GTTCACACCCCCCGATCAGGCACTGTACCTTGCCATCAAGTCTTTTGGCTTTGTTAGCAGCGGGGCCTTTGCCCCACTCACCAAGGCCAC AGGCGATGGCCTCAAGCGTGCCCTCCAGGGTAAGGTGGCCTCCTTCACAGTCATTGGTTATGACCACGATGGTGAGCCCCGCCTCTCAGG AGGCGACCTGATGTCGGCTGTGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAGAGGTGAGTGATCAGCAGAATGGGACATACGTGGT GAGTTACCGACCCCAGCTGGAGGGTGAGCACCTGGTATCTGTGACACTGTGCAACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGT CAAGTCAGGCCGCAGCTACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTG GGGTGTGAGTGTAGACAAGGAGGGCTACATCATTGTCGCCGACCGCAGCAACAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCA CCACAAATTCGGCACCCTGGGCTCCCGGCCTGGGCAGTTCGACCGACCAGCCGGCGTGGCCTGTGACGCCTCACGCAGGATCGTGGTGGC TGACAAGGACAATCATCGCATCCAGATCTTCACGTTCGAGGGCCAGTTCCTCCTCAAGTTTGGTGAGAAAGGAACCAAGAATGGGCAGTT CAACTACCCTTGGGATGTGGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGA TGGTGTCTTCCTAAACAAGTATGGCTTCGAGGGGGCTCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCA CTTGGTGGTCACTGACTTCAACAACCACCGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCGGAGGGCACAGG CAATGGGCAGTTCCTGCGCCCACAAGGGGTAGCTGTGGACCAGGAAGGGCGCATCATTGTGGCGGATTCCAGGAACCATCGGGTACAGAT GTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGGCATCGCCATCAC CCCCGACGGAATGATCGTTGTGGTGGACTTTGGCAACAATCGAATCCTCGTCTTCTAATTGCATTTCCTAGGTTTCTGTGTTTGGGGTGT GTGTGCGTGTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTTTTTGAATTTCAAAGAAGAAACAGTCTCAGGGAAATTTCTTTTT TCTTTTTTTTTTTTAAAGAGAACAAGAAAAGTACAACATTGCTTAAGTCCTACCTCATCTTTATTTTTTTACAGATGAATGTACTTATCT TTTCTGCAGGGATTGAGCCTGTGAAGTGATAATTTCTATCTACCTCATAAATCTTTACATTTCCTTCTGCAACAGGCCCTCTTCCCCTCC TCAGTGGAGTTTGCATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTGT GTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAAAAAAAAACTACTAAGTAAAAAAACAAAAAACTATAAAACATGGAAAAAA TAGGATTTGAAATGCATAATTATAGAATACCTGTGTTCTTGAGAATACTGTTTATATGGGGTTTAGATTATGTTGTGTTGTTTTGATCTT TTTGGAAAATCTTCTCTTTTTAAATGCTGCAACAGAGAAATTTCCTCTGTTCTCTGTTTATACCTCAGTGTGTTTAACATCCTCTTCTGC ATCGTTTCTTGATCTTAGACGTTGTGGCTGTGGCTTGCTAGCCAAGAAAAGCAGACCCTTCATATTTTAGGGTATATAATCTTTGTTTCT TTTAAGGGAGGGTGTGTGCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCCTCCCAAAGAACCT CTCCTTTTCACACTTTGGTTTCTTAAAAAAGTATATAGATGGTAGCTCAGGATTTTTGATTAAACATATTCTCAAAAGTTATGCTTTCTT ATTTTGCTGTTAGGTTATAAAGGGTTAAATGGAAGGAAAAAGGAAATTAACCTCGTTCTCAGAGAGAGGGTTTTCAGGCATGGGCTGACG TGGACATGAATGTGGGTGGACATGCGTGTGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACA GAAAGGGCAGGGTCTGCCCTGACCCGCGAGTGCATGTTGTTCTGTAGTGCTAGGGGTTTCTTTTCCTAAGAAGAGTAGGCAAAGGAAAGA ACTTTTATTTTACAAGCACAATTTTTTCCTGCTTTGAAAGTTCAGGGAAATAGAAGGTTTGAAAGTCAAATTAATACCAACAGCCCAGTC CCACACCCTCTGCTTGGGTCACTTTTTATAGGATTGTTTGCACCCAGGCCATGCTTTAGGACCTCATGGTTAACATGAATCCCCCCGCCC CCTCTCCCCCCAAGGCCTTTGACCATAAAGGATCTAGAAACCAAATTGTCCCAACCTGAAATGTAGGATGTAATGTCTTTTCTTAAACCT GTAACTCGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAATCTGTGTCACTTTACAGGATTGGTTGGTTGT AAGCTGGACTTGGGTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACCCTGCTTGTCAGAA CCCAGTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGAACCAAATTCTGGAGGAGCCCTCCTCAGGGAAAAGAGGGACTCTCAAACAA ACGTCAGTGACTTACAAGGGAGACCTCTTGTTTAAAGACTTATGGATCAACTTCTGTTCCTCTGTTTAAGAGAAATTTCTATTGCAAAAT GGGTATCGTTTTAAATGAGCAGAACAGATTAACAAATGGAGCAATTTGTTTCTGTTATCCCAATAGAAAAGGAGATGATGGGGACAGTGT GACAAGTCAATCAAGTTGCTTTTCCCGTACACCTCTTTTGGACGTTTAATTTACTACTACTACAAGCTACTCTGTCTCTTCCCATTGCTT TAATTCTAGGGTTTCTGAGTGACCAAAATGGGAAGGAAAAAAAAAACCTCATCTCACAGAGGAGAACTGCATGCAATAAAAGATTCAAAA GTTGGAAAGTAGCTTCAAACTGCTGCTGGCTCCCAGCTGCTGTTACAGGGTGGGAAGGTGTTAGGAAATGTTGTTTGTTAGAAGCTCCTT TTACTGTAGAATTTAATAGTGAATCCTTCCCCAATGCCTATTCAGTTGCCTTTTGGCCGTTAAGCTCTAAGTTCTTTGGTAAAGAGTTAA TATAATTAAACATTTTTACTGTTTTCTATTTTGGAGTAACTTGGTGCTGATCTTCCTTCCCTTTCCCCAGCTGCCCAACAAGCCACCCTT TAAACACCAAAGACAACTGGTTTTAAATGCTTGAAAAAAATTTTATTGAGGAGATGGATCTTGATTAAAATCTTTTCATCATCATTTTCA TTCTGCTCTTTTCTTTCTAATTTCCCCAGATGTAGGAAAATTTTGGGACCTGAATGAGAAATGTTCTTGGTGCATAACAGTAACTAGAGC TCCTTATTTGACATTTTACTATGGATGTGATCGAAAAGCCAAGATTTTCGCTCCATGGCTGAAATTATCAGGTCTTAATTTACAGACTTG TAAATTTGCAGGCTTAGAGCAACTAGAACTATCCCCTGAAATAGGTGTGTAGGTCAGAGATACTACCTCTTTGTCCTCAGTGGTGGTATA TCTATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACATGGTCACATTTGGAAAGCTTTTGTTTTTAAAACA TTGGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGCACTTTGGAGAGTGTTTATTGTATGATGTGAAATG TTCTAAATCAAAGAAAGATGATAAAAGCCAACATTTGGCAGTCCCTAGTGTGAAACTGTGAAAAGTACCTGTGTTTAAATGCATAATCTC CTGCCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCTGATGGAAAAAATAAGGTCCTGGGTATTATGAGG TAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATGACAATTACTAGTCCCCATGGAGGTCTGATCTGGTCAGGTGGCAAGGGTTGGGTGG GGTATGATGTAAGCTCAGTTTATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGTTTAAAGGACATCTAAC CCATAGGTAAAAACTACTTTTGCTTGACACTGACTTAACATTTCAAAAGTGTTATTTTTGGTCCCAAGATCTAATGCTGTCTCAGAACAT GTGCCCTGTTGTGGCTGCAAGTGGCACTCAAGTTGACTAGAGCACAGTGACCTGGGTTGTACCCCAAGTGCACTAACTCCTCAATGCCCT TTTAAGTCTAACTTATTTGGGAAACACATAACAAAGGGTACCATAAACCGAATCCAAATTACGTGTTGGGCCAAAAATGTTGCCAGAACT GAGGCACTTTGTGATGGAGTTGCAAGAGATAGCTTGAGATCGGCTCAGTCTGATTTATTCTAGTTAAGCCAAAGCTTAATTATTTGAGGA GGAAAGTCTTTTAGGCTTGAAGCAGCAAAATACTGTTTATATATGTGTTACCTTCCTCGTTGGAAGATTCTACGATTGCTCTGTTCTGGT AGGTGGTGAAAGATATGCCAAAGTTTTAGGCTTGTTTTTCTGATCTTATTTTTTTAATCCAGTGGTGCCAAAAAGTATTTAGGGTATGTT TAAGGTATATTTAAAACATCACTCTGAATGAGTTTCCAACAGTCTGGGGCTGTATAAAAGTCACACTCTTGTACTTGCAGGTGATGGTGT CACAGGGCCAGGGCCTCCAGAGCTCTACGGCTTTCTCTGGTTTTCTATAGGGCCAAGGGCACAGGACGCAGCATTCCAGACCACACTGAC TGCTTTTGCTGAGTTTCTACCTCACTTGTGGCAAGTCATCTACCTCATGTTAGCATCTGACAGGTCTCAAAAAGAATAGTATTAATCCAG TGGGCAGTGGGTGGGAGTGGGAAGCTACCTCTAAAAGAAATGTTACCATAAATCTACAACTGATTTCTCCCAGGAGAAATGTTCTACTTA CCTTGAAAGAGAAATGTCAGGCAAATGTAGTCATAAATCCAAGTAGTTCTTAGCAATCTGGCTTTTCCCCCTCAAAAAGAATTATGCATA CCATTACTGTTGTTCAGTATTATGAAACTACTGGTTAATCTGACCTATTGGAGGACTTAACTACAAATAAAGACCTTTAGGTCTCTTTCT CTTCAAGAGAAAAATATTTTATCTGTATTTCGAATGTCTGCAAATAATACCCTTTAGGAGCAATTCTAAAGGTCTAGATCTTGGAAACAT CAAATATTTGAAGGGAATGAGAATCCTCTTGACTTCATGATTGTATTTGTAGCTCTCTGGACCCGGCAGGACGTTCATCACCATGATGTT GCAACAATCACTGTTTTGACTGAGCAGTGACTGTTGAAGTGTGTATTGCTCTTTTGTTTTGTTTTTATTTTTTTCTACCAAAGGTAACAT GTTGACGGGTTTTTTTTTTCCTTGTTTATTAAATACTTGATAAAGTTGAGAAGCACATTACCAGGATATACTGTATTGACCCTCCCACCT CTCTTCTGCCCTAATTTTTGGTTGTTTGGAAGAGAGGAGGGTCCTAAGACCACTGTCATTATCATGAGGGGCTTATAAATGTCATGGTGA AGAAATACCTCAATGATGTCTATTTTTAAAACTGATCTTACGGGTTAACAAGCCAGCCTGGTGGGATATTTTCCATCATCATTTAACCAA TAATGGTTCTAAAAGTTTTGTGTATCCACATGGTCTTAGACCTCCTTTTAATGATTGTATTAACTTACAAGCTCAGGTAGTATTTTTCTT AAGACTCTATCTCAGAGCACACTGACTGAATGTTGATGTGTGTAGCAAAGTGTTTACTTTCTTTAAATAACCAGCTCTGTAACTCTGTAA GTTCTTTGTGTTTCTAGCAGTCTGTGTAGTTGTCTTTCTTCAGAGGAAGATTTTTCACATTTCTGGGGTTTTCTTGCTTTTAGGGTGGTA AGATTCCTTTCTTTTTTTCCCTTTTCTCCTAAAATCGATGCAGGTAAGGGTGGGTGGGTAAGGGGTGTTGTTTTTTAACTAGCATGTTAG TTATACTTGGGTGGGTGGGAGGGTTGTTAAACTGAATCTTGCTTAATACTGTCCATTAGCTCTCATGCCGGGTCAGCAAAATGCTTTAAT TTTTAACTGCAGAACATGTGACTCGGTTGAGTCTTTTTGTCTTTTTTTTTTTTAAATAAACAATTGGGGGAATTAATGTGGGCAAGTTGC CTTATGTTAGAATGACTAAGTTAAACCTCTTAATTTGTATTTGTCCAAGGCAGACATGATATAAGGAATATGCACTACCGTAGTAACTCC CCTGGCCGCAGAAACCACACTGCAAGCCTGTCCGGGGTGGGGTGCTGACTGCCATTTGCCACTTTTAAATGGGCACTGCCGTGGTAATGT GAATCCCATCAATGCAGTAGATGGGTGGGGAAATGAAGATTTCCCCCCAAACCTTTAGGCAAAAGTGAGTTTTTGTTTGGTTGATTTTGG GTTTTTTTCCCCCCTCCTCTTTTGGCTTTCACATTTTAAATCTTAAATGTTACTATTGCAGGCCGCAGGCATGACAGGCAATGAGCAGGT GAAGAACCAATGGAAAAGTGTTCAAAAACTCCTGTGTTAGCTAACAGGCTTCTGAATGTATCACTGTGGTCCACAGAGAAGGCTGGAGGA GGTAGCAAGGAGATGCTGTATCAGCTACTACAGCCTTAAAACAAAGTTGGTGTCTCTTTGGACTTTAAAATTGTTCCTATGCAGCTTATT >96394_96394_1_UBP1-TRIM71_UBP1_chr3_33481228_ENST00000283629_TRIM71_chr3_32915310_ENST00000383763_length(amino acids)=637AA_BP=53 MDAEAAVCGATARPEDGLGAQDGRGDRVRAGARLRRQPLGHRAGTGRRRLQHEVLHLYCDTCSVPICRECTMGRHGGHSFIYLQEALQDS RALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKL ESTISAVQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSSGAFAPLTKATGDGLKRALQGK VASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGL PGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFT FEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRL LVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFG -------------------------------------------------------------- >96394_96394_2_UBP1-TRIM71_UBP1_chr3_33481228_ENST00000447368_TRIM71_chr3_32915310_ENST00000383763_length(transcript)=8045nt_BP=275nt AGTGGGGCCCCCGCAGCTCTCGTCCCGGCCGCCGCTGGTGACCACTCGCCGCCCCTCCGGAGGCTTCACCCGCGCCCTCCCCCAGGACGC GCCAGCGGAGCTCCGGCTCCTTCGCCCTGGACGCGGAGGCCGCGGTGTGCGGGGCGACGGCGAGGCCGGAAGATGGCCTGGGTGCTCAAG ATGGACGAGGTGATCGAGTCCGGGCTGGTGCACGACTTCGACGCCAGCCTCTCGGGCATCGGGCAGGAACTGGGCGCCGGCGCTTACAGC ATGAGGTGCTGCACCTGTACTGTGACACTTGCTCTGTACCCATCTGTCGTGAGTGCACAATGGGCCGGCATGGGGGCCACAGCTTCATCT ACCTCCAGGAGGCACTGCAGGACTCACGGGCACTCACCATCCAGCTGCTGGCAGATGCCCAGCAGGGACGACAGGCAATCCAGCTGAGCA TCGAGCAGGCCCAGACGGTGGCGGAACAGGTGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGA AAGCCCTGGAGGAACGCGAGTGTGAGCTGCTGTGGAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGA AGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGGTAGAGCGCTAGACATCCTACTGG CCCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTGAAGACCGTGCGGAGCCTCCTGCAGCCCCAGGAAGACGACCGAGTCATGTTCACAC CCCCCGATCAGGCACTGTACCTTGCCATCAAGTCTTTTGGCTTTGTTAGCAGCGGGGCCTTTGCCCCACTCACCAAGGCCACAGGCGATG GCCTCAAGCGTGCCCTCCAGGGTAAGGTGGCCTCCTTCACAGTCATTGGTTATGACCACGATGGTGAGCCCCGCCTCTCAGGAGGCGACC TGATGTCGGCTGTGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAGAGGTGAGTGATCAGCAGAATGGGACATACGTGGTGAGTTACC GACCCCAGCTGGAGGGTGAGCACCTGGTATCTGTGACACTGTGCAACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTCAG GCCGCAGCTACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTGGGGTGTGA GTGTAGACAAGGAGGGCTACATCATTGTCGCCGACCGCAGCAACAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCACCACAAAT TCGGCACCCTGGGCTCCCGGCCTGGGCAGTTCGACCGACCAGCCGGCGTGGCCTGTGACGCCTCACGCAGGATCGTGGTGGCTGACAAGG ACAATCATCGCATCCAGATCTTCACGTTCGAGGGCCAGTTCCTCCTCAAGTTTGGTGAGAAAGGAACCAAGAATGGGCAGTTCAACTACC CTTGGGATGTGGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGATGGTGTCT TCCTAAACAAGTATGGCTTCGAGGGGGCTCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTGG TCACTGACTTCAACAACCACCGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCGGAGGGCACAGGCAATGGGC AGTTCCTGCGCCCACAAGGGGTAGCTGTGGACCAGGAAGGGCGCATCATTGTGGCGGATTCCAGGAACCATCGGGTACAGATGTTTGAAT CCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGGCATCGCCATCACCCCCGACG GAATGATCGTTGTGGTGGACTTTGGCAACAATCGAATCCTCGTCTTCTAATTGCATTTCCTAGGTTTCTGTGTTTGGGGTGTGTGTGCGT GTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTTTTTGAATTTCAAAGAAGAAACAGTCTCAGGGAAATTTCTTTTTTCTTTTTT TTTTTTAAAGAGAACAAGAAAAGTACAACATTGCTTAAGTCCTACCTCATCTTTATTTTTTTACAGATGAATGTACTTATCTTTTCTGCA GGGATTGAGCCTGTGAAGTGATAATTTCTATCTACCTCATAAATCTTTACATTTCCTTCTGCAACAGGCCCTCTTCCCCTCCTCAGTGGA GTTTGCATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTGTGTGGTGGG GTGTATTCTGTAGATTGAGCCAAGGAAACACAAAAAAAAACTACTAAGTAAAAAAACAAAAAACTATAAAACATGGAAAAAATAGGATTT GAAATGCATAATTATAGAATACCTGTGTTCTTGAGAATACTGTTTATATGGGGTTTAGATTATGTTGTGTTGTTTTGATCTTTTTGGAAA ATCTTCTCTTTTTAAATGCTGCAACAGAGAAATTTCCTCTGTTCTCTGTTTATACCTCAGTGTGTTTAACATCCTCTTCTGCATCGTTTC TTGATCTTAGACGTTGTGGCTGTGGCTTGCTAGCCAAGAAAAGCAGACCCTTCATATTTTAGGGTATATAATCTTTGTTTCTTTTAAGGG AGGGTGTGTGCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCCTCCCAAAGAACCTCTCCTTTT CACACTTTGGTTTCTTAAAAAAGTATATAGATGGTAGCTCAGGATTTTTGATTAAACATATTCTCAAAAGTTATGCTTTCTTATTTTGCT GTTAGGTTATAAAGGGTTAAATGGAAGGAAAAAGGAAATTAACCTCGTTCTCAGAGAGAGGGTTTTCAGGCATGGGCTGACGTGGACATG AATGTGGGTGGACATGCGTGTGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGC AGGGTCTGCCCTGACCCGCGAGTGCATGTTGTTCTGTAGTGCTAGGGGTTTCTTTTCCTAAGAAGAGTAGGCAAAGGAAAGAACTTTTAT TTTACAAGCACAATTTTTTCCTGCTTTGAAAGTTCAGGGAAATAGAAGGTTTGAAAGTCAAATTAATACCAACAGCCCAGTCCCACACCC TCTGCTTGGGTCACTTTTTATAGGATTGTTTGCACCCAGGCCATGCTTTAGGACCTCATGGTTAACATGAATCCCCCCGCCCCCTCTCCC CCCAAGGCCTTTGACCATAAAGGATCTAGAAACCAAATTGTCCCAACCTGAAATGTAGGATGTAATGTCTTTTCTTAAACCTGTAACTCG GTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAATCTGTGTCACTTTACAGGATTGGTTGGTTGTAAGCTGGA CTTGGGTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACCCTGCTTGTCAGAACCCAGTGG GTTCCTGCAATGCCCCAAATACTGAAATAAGAACCAAATTCTGGAGGAGCCCTCCTCAGGGAAAAGAGGGACTCTCAAACAAACGTCAGT GACTTACAAGGGAGACCTCTTGTTTAAAGACTTATGGATCAACTTCTGTTCCTCTGTTTAAGAGAAATTTCTATTGCAAAATGGGTATCG TTTTAAATGAGCAGAACAGATTAACAAATGGAGCAATTTGTTTCTGTTATCCCAATAGAAAAGGAGATGATGGGGACAGTGTGACAAGTC AATCAAGTTGCTTTTCCCGTACACCTCTTTTGGACGTTTAATTTACTACTACTACAAGCTACTCTGTCTCTTCCCATTGCTTTAATTCTA GGGTTTCTGAGTGACCAAAATGGGAAGGAAAAAAAAAACCTCATCTCACAGAGGAGAACTGCATGCAATAAAAGATTCAAAAGTTGGAAA GTAGCTTCAAACTGCTGCTGGCTCCCAGCTGCTGTTACAGGGTGGGAAGGTGTTAGGAAATGTTGTTTGTTAGAAGCTCCTTTTACTGTA GAATTTAATAGTGAATCCTTCCCCAATGCCTATTCAGTTGCCTTTTGGCCGTTAAGCTCTAAGTTCTTTGGTAAAGAGTTAATATAATTA AACATTTTTACTGTTTTCTATTTTGGAGTAACTTGGTGCTGATCTTCCTTCCCTTTCCCCAGCTGCCCAACAAGCCACCCTTTAAACACC AAAGACAACTGGTTTTAAATGCTTGAAAAAAATTTTATTGAGGAGATGGATCTTGATTAAAATCTTTTCATCATCATTTTCATTCTGCTC TTTTCTTTCTAATTTCCCCAGATGTAGGAAAATTTTGGGACCTGAATGAGAAATGTTCTTGGTGCATAACAGTAACTAGAGCTCCTTATT TGACATTTTACTATGGATGTGATCGAAAAGCCAAGATTTTCGCTCCATGGCTGAAATTATCAGGTCTTAATTTACAGACTTGTAAATTTG CAGGCTTAGAGCAACTAGAACTATCCCCTGAAATAGGTGTGTAGGTCAGAGATACTACCTCTTTGTCCTCAGTGGTGGTATATCTATCTC CTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACATGGTCACATTTGGAAAGCTTTTGTTTTTAAAACATTGGCGGT TTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGCACTTTGGAGAGTGTTTATTGTATGATGTGAAATGTTCTAAAT CAAAGAAAGATGATAAAAGCCAACATTTGGCAGTCCCTAGTGTGAAACTGTGAAAAGTACCTGTGTTTAAATGCATAATCTCCTGCCCGG GTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCTGATGGAAAAAATAAGGTCCTGGGTATTATGAGGTAGGAGAA TAAAAAGGTTTCTGGGGAGTAAGTATGACAATTACTAGTCCCCATGGAGGTCTGATCTGGTCAGGTGGCAAGGGTTGGGTGGGGTATGAT GTAAGCTCAGTTTATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGTTTAAAGGACATCTAACCCATAGGT AAAAACTACTTTTGCTTGACACTGACTTAACATTTCAAAAGTGTTATTTTTGGTCCCAAGATCTAATGCTGTCTCAGAACATGTGCCCTG TTGTGGCTGCAAGTGGCACTCAAGTTGACTAGAGCACAGTGACCTGGGTTGTACCCCAAGTGCACTAACTCCTCAATGCCCTTTTAAGTC TAACTTATTTGGGAAACACATAACAAAGGGTACCATAAACCGAATCCAAATTACGTGTTGGGCCAAAAATGTTGCCAGAACTGAGGCACT TTGTGATGGAGTTGCAAGAGATAGCTTGAGATCGGCTCAGTCTGATTTATTCTAGTTAAGCCAAAGCTTAATTATTTGAGGAGGAAAGTC TTTTAGGCTTGAAGCAGCAAAATACTGTTTATATATGTGTTACCTTCCTCGTTGGAAGATTCTACGATTGCTCTGTTCTGGTAGGTGGTG AAAGATATGCCAAAGTTTTAGGCTTGTTTTTCTGATCTTATTTTTTTAATCCAGTGGTGCCAAAAAGTATTTAGGGTATGTTTAAGGTAT ATTTAAAACATCACTCTGAATGAGTTTCCAACAGTCTGGGGCTGTATAAAAGTCACACTCTTGTACTTGCAGGTGATGGTGTCACAGGGC CAGGGCCTCCAGAGCTCTACGGCTTTCTCTGGTTTTCTATAGGGCCAAGGGCACAGGACGCAGCATTCCAGACCACACTGACTGCTTTTG CTGAGTTTCTACCTCACTTGTGGCAAGTCATCTACCTCATGTTAGCATCTGACAGGTCTCAAAAAGAATAGTATTAATCCAGTGGGCAGT GGGTGGGAGTGGGAAGCTACCTCTAAAAGAAATGTTACCATAAATCTACAACTGATTTCTCCCAGGAGAAATGTTCTACTTACCTTGAAA GAGAAATGTCAGGCAAATGTAGTCATAAATCCAAGTAGTTCTTAGCAATCTGGCTTTTCCCCCTCAAAAAGAATTATGCATACCATTACT GTTGTTCAGTATTATGAAACTACTGGTTAATCTGACCTATTGGAGGACTTAACTACAAATAAAGACCTTTAGGTCTCTTTCTCTTCAAGA GAAAAATATTTTATCTGTATTTCGAATGTCTGCAAATAATACCCTTTAGGAGCAATTCTAAAGGTCTAGATCTTGGAAACATCAAATATT TGAAGGGAATGAGAATCCTCTTGACTTCATGATTGTATTTGTAGCTCTCTGGACCCGGCAGGACGTTCATCACCATGATGTTGCAACAAT CACTGTTTTGACTGAGCAGTGACTGTTGAAGTGTGTATTGCTCTTTTGTTTTGTTTTTATTTTTTTCTACCAAAGGTAACATGTTGACGG GTTTTTTTTTTCCTTGTTTATTAAATACTTGATAAAGTTGAGAAGCACATTACCAGGATATACTGTATTGACCCTCCCACCTCTCTTCTG CCCTAATTTTTGGTTGTTTGGAAGAGAGGAGGGTCCTAAGACCACTGTCATTATCATGAGGGGCTTATAAATGTCATGGTGAAGAAATAC CTCAATGATGTCTATTTTTAAAACTGATCTTACGGGTTAACAAGCCAGCCTGGTGGGATATTTTCCATCATCATTTAACCAATAATGGTT CTAAAAGTTTTGTGTATCCACATGGTCTTAGACCTCCTTTTAATGATTGTATTAACTTACAAGCTCAGGTAGTATTTTTCTTAAGACTCT ATCTCAGAGCACACTGACTGAATGTTGATGTGTGTAGCAAAGTGTTTACTTTCTTTAAATAACCAGCTCTGTAACTCTGTAAGTTCTTTG TGTTTCTAGCAGTCTGTGTAGTTGTCTTTCTTCAGAGGAAGATTTTTCACATTTCTGGGGTTTTCTTGCTTTTAGGGTGGTAAGATTCCT TTCTTTTTTTCCCTTTTCTCCTAAAATCGATGCAGGTAAGGGTGGGTGGGTAAGGGGTGTTGTTTTTTAACTAGCATGTTAGTTATACTT GGGTGGGTGGGAGGGTTGTTAAACTGAATCTTGCTTAATACTGTCCATTAGCTCTCATGCCGGGTCAGCAAAATGCTTTAATTTTTAACT GCAGAACATGTGACTCGGTTGAGTCTTTTTGTCTTTTTTTTTTTTAAATAAACAATTGGGGGAATTAATGTGGGCAAGTTGCCTTATGTT AGAATGACTAAGTTAAACCTCTTAATTTGTATTTGTCCAAGGCAGACATGATATAAGGAATATGCACTACCGTAGTAACTCCCCTGGCCG CAGAAACCACACTGCAAGCCTGTCCGGGGTGGGGTGCTGACTGCCATTTGCCACTTTTAAATGGGCACTGCCGTGGTAATGTGAATCCCA TCAATGCAGTAGATGGGTGGGGAAATGAAGATTTCCCCCCAAACCTTTAGGCAAAAGTGAGTTTTTGTTTGGTTGATTTTGGGTTTTTTT CCCCCCTCCTCTTTTGGCTTTCACATTTTAAATCTTAAATGTTACTATTGCAGGCCGCAGGCATGACAGGCAATGAGCAGGTGAAGAACC AATGGAAAAGTGTTCAAAAACTCCTGTGTTAGCTAACAGGCTTCTGAATGTATCACTGTGGTCCACAGAGAAGGCTGGAGGAGGTAGCAA GGAGATGCTGTATCAGCTACTACAGCCTTAAAACAAAGTTGGTGTCTCTTTGGACTTTAAAATTGTTCCTATGCAGCTTATTTTATTTTT >96394_96394_2_UBP1-TRIM71_UBP1_chr3_33481228_ENST00000447368_TRIM71_chr3_32915310_ENST00000383763_length(amino acids)=637AA_BP=53 MDAEAAVCGATARPEDGLGAQDGRGDRVRAGARLRRQPLGHRAGTGRRRLQHEVLHLYCDTCSVPICRECTMGRHGGHSFIYLQEALQDS RALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKL ESTISAVQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSSGAFAPLTKATGDGLKRALQGK VASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGL PGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFT FEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRL LVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for UBP1-TRIM71 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for UBP1-TRIM71 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for UBP1-TRIM71 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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