|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:URI1-EIF3H (FusionGDB2 ID:97070) |
Fusion Gene Summary for URI1-EIF3H |
Fusion gene summary |
Fusion gene information | Fusion gene name: URI1-EIF3H | Fusion gene ID: 97070 | Hgene | Tgene | Gene symbol | URI1 | EIF3H | Gene ID | 8725 | 8667 |
Gene name | URI1 prefoldin like chaperone | eukaryotic translation initiation factor 3 subunit H | |
Synonyms | C19orf2|NNX3|PPP1R19|RMP|URI | EIF3S3|eIF3-gamma|eIF3-p40 | |
Cytomap | 19q12 | 8q23.3-q24.11 | |
Type of gene | protein-coding | protein-coding | |
Description | unconventional prefoldin RPB5 interactor 1RNA polymerase II subunit 5-mediating proteinRPB5-mediating proteinprotein phosphatase 1, regulatory subunit 19 | eukaryotic translation initiation factor 3 subunit HeIF-3-gammaeIF3 p40 subuniteukaryotic translation initiation factor 3 subunit 3eukaryotic translation initiation factor 3, subunit 2 (beta, 36kD)eukaryotic translation initiation factor 3, subunit 3 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | O94763 | O15372 | |
Ensembl transtripts involved in fusion gene | ENST00000392271, ENST00000312051, ENST00000542441, ENST00000360605, ENST00000574176, | ENST00000276682, ENST00000521861, | |
Fusion gene scores | * DoF score | 30 X 13 X 12=4680 | 20 X 15 X 12=3600 |
# samples | 40 | 32 | |
** MAII score | log2(40/4680*10)=-3.54843662469604 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(32/3600*10)=-3.49185309632968 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: URI1 [Title/Abstract] AND EIF3H [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EIF3H(117738254)-URI1(30476129), # samples:1 EIF3H(117738255)-URI1(30476130), # samples:1 URI1(30433571)-EIF3H(117671219), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | EIF3H-URI1 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. EIF3H-URI1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. EIF3H-URI1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. URI1-EIF3H seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. URI1-EIF3H seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. URI1-EIF3H seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | URI1 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 12737519|15367675|21730289 |
Hgene | URI1 | GO:0001558 | regulation of cell growth | 21730289 |
Hgene | URI1 | GO:0071363 | cellular response to growth factor stimulus | 17936702 |
Hgene | URI1 | GO:0071383 | cellular response to steroid hormone stimulus | 21730289 |
Tgene | EIF3H | GO:0006413 | translational initiation | 17581632 |
Fusion gene breakpoints across URI1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across EIF3H (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-VQ-A94O-01A | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
ChimerDB4 | STAD | TCGA-VQ-A94O-01A | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
ChimerDB4 | STAD | TCGA-VQ-A94O-01A | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
ChimerDB4 | STAD | TCGA-VQ-A94O | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
ChimerDB4 | STAD | TCGA-VQ-A94O | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
Top |
Fusion Gene ORF analysis for URI1-EIF3H |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-3CDS | ENST00000392271 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
5UTR-3CDS | ENST00000392271 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
5UTR-3CDS | ENST00000392271 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
5UTR-3CDS | ENST00000392271 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
5UTR-3CDS | ENST00000392271 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
5UTR-3CDS | ENST00000392271 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
Frame-shift | ENST00000312051 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
Frame-shift | ENST00000312051 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
Frame-shift | ENST00000542441 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
Frame-shift | ENST00000542441 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
Frame-shift | ENST00000542441 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
Frame-shift | ENST00000542441 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
Frame-shift | ENST00000542441 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
Frame-shift | ENST00000542441 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
In-frame | ENST00000312051 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
In-frame | ENST00000312051 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
In-frame | ENST00000312051 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
In-frame | ENST00000312051 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
intron-3CDS | ENST00000360605 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
intron-3CDS | ENST00000360605 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
intron-3CDS | ENST00000360605 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
intron-3CDS | ENST00000360605 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
intron-3CDS | ENST00000360605 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
intron-3CDS | ENST00000360605 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
intron-3CDS | ENST00000574176 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
intron-3CDS | ENST00000574176 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
intron-3CDS | ENST00000574176 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
intron-3CDS | ENST00000574176 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - |
intron-3CDS | ENST00000574176 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117671219 | - |
intron-3CDS | ENST00000574176 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000312051 | URI1 | chr19 | 30433571 | + | ENST00000521861 | EIF3H | chr8 | 117668244 | - | 3525 | 147 | 10 | 648 | 212 |
ENST00000312051 | URI1 | chr19 | 30433571 | + | ENST00000276682 | EIF3H | chr8 | 117668244 | - | 822 | 147 | 10 | 648 | 212 |
ENST00000312051 | URI1 | chr19 | 30433571 | + | ENST00000521861 | EIF3H | chr8 | 117661165 | - | 3375 | 147 | 10 | 498 | 162 |
ENST00000312051 | URI1 | chr19 | 30433571 | + | ENST00000276682 | EIF3H | chr8 | 117661165 | - | 672 | 147 | 10 | 498 | 162 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000312051 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - | 0.002119752 | 0.9978802 |
ENST00000312051 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117668244 | - | 0.002460651 | 0.9975394 |
ENST00000312051 | ENST00000521861 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - | 0.011181026 | 0.98881894 |
ENST00000312051 | ENST00000276682 | URI1 | chr19 | 30433571 | + | EIF3H | chr8 | 117661165 | - | 0.007506953 | 0.9924931 |
Top |
Fusion Genomic Features for URI1-EIF3H |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for URI1-EIF3H |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr19:117738254/chr8:30476129) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
URI1 | EIF3H |
FUNCTION: Involved in gene transcription regulation. Acts as a transcriptional repressor in concert with the corepressor UXT to regulate androgen receptor (AR) transcription. May act as a tumor suppressor to repress AR-mediated gene transcription and to inhibit anchorage-independent growth in prostate cancer cells. Required for cell survival in ovarian cancer cells. Together with UXT, associates with chromatin to the NKX3-1 promoter region. Antagonizes transcriptional modulation via hepatitis B virus X protein.; FUNCTION: Plays a central role in maintaining S6K1 signaling and BAD phosphorylation under normal growth conditions thereby protecting cells from potential deleterious effects of sustained S6K1 signaling. The URI1-PPP1CC complex acts as a central component of a negative feedback mechanism that counteracts excessive S6K1 survival signaling to BAD in response to growth factors. Mediates inhibition of PPP1CC phosphatase activity in mitochondria. Coordinates the regulation of nutrient-sensitive gene expression availability in a mTOR-dependent manner. Seems to be a scaffolding protein able to assemble a prefoldin-like complex that contains PFDs and proteins with roles in transcription and ubiquitination. | FUNCTION: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis (PubMed:17581632, PubMed:25849773, PubMed:27462815). The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation (PubMed:17581632). The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression (PubMed:25849773). {ECO:0000255|HAMAP-Rule:MF_03007, ECO:0000269|PubMed:17581632, ECO:0000269|PubMed:25849773, ECO:0000269|PubMed:27462815}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | URI1 | chr19:30433571 | chr8:117661165 | ENST00000360605 | + | 1 | 11 | 299_311 | 0 | 476.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117661165 | ENST00000360605 | + | 1 | 11 | 314_321 | 0 | 476.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117661165 | ENST00000392271 | + | 1 | 11 | 299_311 | 0 | 460.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117661165 | ENST00000392271 | + | 1 | 11 | 314_321 | 0 | 460.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117661165 | ENST00000542441 | + | 1 | 11 | 299_311 | 39 | 536.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117661165 | ENST00000542441 | + | 1 | 11 | 314_321 | 39 | 536.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117668244 | ENST00000360605 | + | 1 | 11 | 299_311 | 0 | 476.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117668244 | ENST00000360605 | + | 1 | 11 | 314_321 | 0 | 476.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117668244 | ENST00000392271 | + | 1 | 11 | 299_311 | 0 | 460.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117668244 | ENST00000392271 | + | 1 | 11 | 314_321 | 0 | 460.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117668244 | ENST00000542441 | + | 1 | 11 | 299_311 | 39 | 536.0 | Compositional bias | Note=Poly-Asp |
Hgene | URI1 | chr19:30433571 | chr8:117668244 | ENST00000542441 | + | 1 | 11 | 314_321 | 39 | 536.0 | Compositional bias | Note=Poly-Asp |
Tgene | EIF3H | chr19:30433571 | chr8:117661165 | ENST00000521861 | 4 | 8 | 39_173 | 235 | 353.0 | Domain | MPN | |
Tgene | EIF3H | chr19:30433571 | chr8:117668244 | ENST00000521861 | 3 | 8 | 39_173 | 185 | 353.0 | Domain | MPN |
Top |
Fusion Gene Sequence for URI1-EIF3H |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>97070_97070_1_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117661165_ENST00000276682_length(transcript)=672nt_BP=147nt ACACGCCGCGCTGAGGCCCGCGGGCCCGTCATGGAGGCGCCCACCGTGGAGACGCCCCCCGACCCCTCGCCCCCTTCGGCCCCGGCCCCT GCCCTGGTTCCGTTGCGCGCCCCGGATGTGGCGCGGCTGCGCGAGGAGCAGGAAAAGCAATCATTTGGGGAAGAATCTACAGTTGCTGAT GGACAGAGTGGATGAAATGAGCCAAGATATAGTTAAATACAACACATACATGAGGAATACTAGTAAACAACAGCAGCAGAAACATCAGTA TCAGCAGCGTCGCCAGCAGGAGAATATGCAGCGCCAGAGCCGAGGAGAACCCCCGCTCCCTGAGGAGGACCTGTCCAAACTCTTCAAACC ACCACAGCCGCCTGCCAGGATGGACTCGCTGCTCATTGCAGGCCAGATAAACACTTACTGCCAGAACATCAAGGAGTTCACTGCCCAAAA CTTAGGCAAGCTCTTCATGGCCCAGGCTCTTCAAGAATACAACAACTAAGAAAAGGAAGTTTCCAGAAAAGAAGTTAACATGAACTCTTG AAGTCACACCAGGGCAACTCTTGGAAGAAATATATTTGCATATTGAAAAGCACAGAGGATTTCTTTAGTGTCATTGCCGATTTTGGCTAT >97070_97070_1_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117661165_ENST00000276682_length(amino acids)=162AA_BP=45 MRPAGPSWRRPPWRRPPTPRPLRPRPLPWFRCAPRMWRGCARSRKSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQR -------------------------------------------------------------- >97070_97070_2_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117661165_ENST00000521861_length(transcript)=3375nt_BP=147nt ACACGCCGCGCTGAGGCCCGCGGGCCCGTCATGGAGGCGCCCACCGTGGAGACGCCCCCCGACCCCTCGCCCCCTTCGGCCCCGGCCCCT GCCCTGGTTCCGTTGCGCGCCCCGGATGTGGCGCGGCTGCGCGAGGAGCAGGAAAAGCAATCATTTGGGGAAGAATCTACAGTTGCTGAT GGACAGAGTGGATGAAATGAGCCAAGATATAGTTAAATACAACACATACATGAGGAATACTAGTAAACAACAGCAGCAGAAACATCAGTA TCAGCAGCGTCGCCAGCAGGAGAATATGCAGCGCCAGAGCCGAGGAGAACCCCCGCTCCCTGAGGAGGACCTGTCCAAACTCTTCAAACC ACCACAGCCGCCTGCCAGGATGGACTCGCTGCTCATTGCAGGCCAGATAAACACTTACTGCCAGAACATCAAGGAGTTCACTGCCCAAAA CTTAGGCAAGCTCTTCATGGCCCAGGCTCTTCAAGAATACAACAACTAAGAAAAGGAAGTTTCCAGAAAAGAAGTTAACATGAACTCTTG AAGTCACACCAGGGCAACTCTTGGAAGAAATATATTTGCATATTGAAAAGCACAGAGGATTTCTTTAGTGTCATTGCCGATTTTGGCTAT AACAGTGTCTTTCTAGCCATAATAAAATAAAACAAAATCTTGACTGCTTGCTCATTTGATTTTAGATGTATTTTCTCTGGCTTACTTTTG TTTGCTTATACTTGTTTATTTCTAAAAGCTAAAACAAGCCCTGACCGGAAGTTTCACCAGGCAGAAACCTATAGGCTCCACCACTTTTGC TGCCTCTCAGGTGCCACCTTTCAACCCACTTCTCCCAACTACTTATCCCAGCTCCTGACCCCGAGGCCCTGGCATCTACTGTGAATATTT TTTTTTTGAATTTTTATACTTCGCTGCTCCCAAATGAGCACCCCGAGAGAAGTCCAGGCTTCATGTACTTGCCCAGGAATTCCTTGTCCC CGGACCCGGAATCACTTGGCCTAATTCCGGTCAGTCTGCCTTTTCATTTCTGCAGGTGATGGTCAACCAGTCCCCGTACTCATAGGCCAT GGGACACAAGATTATTATTATCATCATTATTTTTAAAGACAGAGTCTCACTTTGTTGCCCAGGCTGGAGTGTAGTGGCACAATCTCAGCT CGCTGCAACCTCCACCTTCTGAGTTCAAGCGATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTGTGCCATCACGCCTGG CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTGCATCTCCTGACCTCAAGTGATTCACCTGCTTCT GTCTCCCAAAGTGCTGGGAATACAGGCATGAGCCACCACTCCTGGACAGGCCACAGAAATTTTAAAGAAAAGAATCATGCCACCACAAGT AAACTTCATTTTGTTTATATTATTTAGGACTTCACATTTGTCTTCCGAAACCATGAAGTATAATTCTGCTAACAGCAAGTGTTGTGAATG AGGAATTAGGAATTAGGAGAATGGTAGTACATTGGGAAAAACATATTTTAGTAATTTTTATATTTTAAAGATAATCACAGATTTTGCTGT TTGTGCATCACCAAAATCAGTGAGATCTGCCAGCTGGTGGGGGTGTGCCTATGAGAATTTTTGATTATGATCCCCTAGGAGGGTTATCAA AAAAGGAGATGGGTGAAAGATCAGGAGAGTCGAGAAATTCATTTTTTGGACAACATTGTTTTGAAGGCACTACTGGGGCTCTGGGATCAG GCAGCCAGATTGAAACCTGGCTCCTCCTTTTCCTAAGTTATTTAACCTCCCTGTGCCTCACTTTTTGTCAACCAGATAAGATAAGAAATG AGAGCAGGTCTGTTACCTCACAAGGTGGCTGTGAGTGTTGAAGACGTTTGTTGGGGGTTTGGGTGAAGCATGCAAACTCTGGTTGGTATG TGGCAGCCACTCAGCCTGTATTTATGATGAGGGAGGCATTCTAGGCACCCCTTCCAGGATGTTGGGTTGTTGGCTGGGTTTTACTTTAAA AAGCTCAGGGCCTAGAACATTCTAGAATCCAAGTACTTGCTCACATATATAATTATTTCTTTAGGATAATCTTTGATATAGACTTACGAG TCAAAGGGTATGTAAAATGTCAGCCCTTTTACCTGTATTGCCAAATTGCCTTCAAAAGTTTCTGCTGTTTTGCCCTCCTACCCATAGTGA TAACCTTAAATTGGAGTCAACACAAATTTGAGTGTGACTGTGTTAGACAGAAGGGATATATTAACAGGTAAAACTGGCCATGGCCCCTGC CCTTGTGGAGTATATGCTCTGTTGGTTCATTTCCTCTGCATTCTAATTTTCTAGACTTGGGATCTTATTGTGGAGTTAAACAAAGCACCC TTAAAGTAGCAAGCGAGCAAAATAAAAGCAAGGAAAATCAGTTGGAACATAACTTATGTATTTTTTAGGATTAAGAGTAATTTAACTGAG TCAATTCAATATGTTTTTAAAGGTGTGATTCTTAAATTCTTTATGATTGTTTAGATTTCTATATCTTGGTAACATGAATACACACTTAAT GAAAGATTTCAGTAATTTTTGATTTGGGAATTAATCATAGTGGGAAAAACTGTTTAGGAAAACATGTCAGTGGAAATTAACTCGCCACAG TATGTAGTGTTAGGGAATAGCTTCTGTTCGGCATTTGATTTGAGTGCTGTATTCTGACATTTTTCAGGAACAAATACATGTGATTCATCT TCTATAAATATTTGCAGTTTCTTCAAGTTGAAATGAGAAAAGCTCGTAAATTGAGCACCAGGTCTAATAAATCATTCACTTACCCAAGAA CAGAAAGACAGGAAAAGCTAGCATGTTAATCTAATGAAAAAATCGAATGTTAAAAAACCAAGAAAGTAGAAGATATTTGACATTAACTTT CTAATCATTGATAATAATCTAATAATCATAACATTATTCTTAAAACCTGAAAGAATGGATTCCTGCTCCCAATGTGTTTTTAATATCAAC TTAAACTAAAATAATTTTTTTACCTATTTTTGGAAGCTTGGAAATTGAGATGTAGTTGTCTAATGTTAACCTAATTAAGAGAGCTTGGTG TGATTTCTCATATACAGCATCTAAATATTTAAGTTTTAATGTCTTCTAAAATATTATTACATTCTTCATACTATAGTTTTTTAACATCCT TTAGAAAACTTGTATCAGCTTCACTTTCAAACCATGCTGGCATCGAACTCAGGTGTAGTGGTATCAGAATGTTATGAAATAATTTTTTAT >97070_97070_2_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117661165_ENST00000521861_length(amino acids)=162AA_BP=45 MRPAGPSWRRPPWRRPPTPRPLRPRPLPWFRCAPRMWRGCARSRKSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQR -------------------------------------------------------------- >97070_97070_3_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117668244_ENST00000276682_length(transcript)=822nt_BP=147nt ACACGCCGCGCTGAGGCCCGCGGGCCCGTCATGGAGGCGCCCACCGTGGAGACGCCCCCCGACCCCTCGCCCCCTTCGGCCCCGGCCCCT GCCCTGGTTCCGTTGCGCGCCCCGGATGTGGCGCGGCTGCGCGAGGAGCAGGAAAAGATTGAAAAAAGCAAATATCACCTTTGAGTACAT GTTTGAAGAAGTGCCGATTGTAATTAAAAATTCACATCTGATCAATGTCCTAATGTGGGAACTTGAAAAGAAGTCAGCTGTTGCAGATAA ACATGAATTGCTCAGCCTTGCCAGCAGCAATCATTTGGGGAAGAATCTACAGTTGCTGATGGACAGAGTGGATGAAATGAGCCAAGATAT AGTTAAATACAACACATACATGAGGAATACTAGTAAACAACAGCAGCAGAAACATCAGTATCAGCAGCGTCGCCAGCAGGAGAATATGCA GCGCCAGAGCCGAGGAGAACCCCCGCTCCCTGAGGAGGACCTGTCCAAACTCTTCAAACCACCACAGCCGCCTGCCAGGATGGACTCGCT GCTCATTGCAGGCCAGATAAACACTTACTGCCAGAACATCAAGGAGTTCACTGCCCAAAACTTAGGCAAGCTCTTCATGGCCCAGGCTCT TCAAGAATACAACAACTAAGAAAAGGAAGTTTCCAGAAAAGAAGTTAACATGAACTCTTGAAGTCACACCAGGGCAACTCTTGGAAGAAA TATATTTGCATATTGAAAAGCACAGAGGATTTCTTTAGTGTCATTGCCGATTTTGGCTATAACAGTGTCTTTCTAGCCATAATAAAATAA >97070_97070_3_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117668244_ENST00000276682_length(amino acids)=212AA_BP=45 MRPAGPSWRRPPWRRPPTPRPLRPRPLPWFRCAPRMWRGCARSRKRLKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHEL LSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIA -------------------------------------------------------------- >97070_97070_4_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117668244_ENST00000521861_length(transcript)=3525nt_BP=147nt ACACGCCGCGCTGAGGCCCGCGGGCCCGTCATGGAGGCGCCCACCGTGGAGACGCCCCCCGACCCCTCGCCCCCTTCGGCCCCGGCCCCT GCCCTGGTTCCGTTGCGCGCCCCGGATGTGGCGCGGCTGCGCGAGGAGCAGGAAAAGATTGAAAAAAGCAAATATCACCTTTGAGTACAT GTTTGAAGAAGTGCCGATTGTAATTAAAAATTCACATCTGATCAATGTCCTAATGTGGGAACTTGAAAAGAAGTCAGCTGTTGCAGATAA ACATGAATTGCTCAGCCTTGCCAGCAGCAATCATTTGGGGAAGAATCTACAGTTGCTGATGGACAGAGTGGATGAAATGAGCCAAGATAT AGTTAAATACAACACATACATGAGGAATACTAGTAAACAACAGCAGCAGAAACATCAGTATCAGCAGCGTCGCCAGCAGGAGAATATGCA GCGCCAGAGCCGAGGAGAACCCCCGCTCCCTGAGGAGGACCTGTCCAAACTCTTCAAACCACCACAGCCGCCTGCCAGGATGGACTCGCT GCTCATTGCAGGCCAGATAAACACTTACTGCCAGAACATCAAGGAGTTCACTGCCCAAAACTTAGGCAAGCTCTTCATGGCCCAGGCTCT TCAAGAATACAACAACTAAGAAAAGGAAGTTTCCAGAAAAGAAGTTAACATGAACTCTTGAAGTCACACCAGGGCAACTCTTGGAAGAAA TATATTTGCATATTGAAAAGCACAGAGGATTTCTTTAGTGTCATTGCCGATTTTGGCTATAACAGTGTCTTTCTAGCCATAATAAAATAA AACAAAATCTTGACTGCTTGCTCATTTGATTTTAGATGTATTTTCTCTGGCTTACTTTTGTTTGCTTATACTTGTTTATTTCTAAAAGCT AAAACAAGCCCTGACCGGAAGTTTCACCAGGCAGAAACCTATAGGCTCCACCACTTTTGCTGCCTCTCAGGTGCCACCTTTCAACCCACT TCTCCCAACTACTTATCCCAGCTCCTGACCCCGAGGCCCTGGCATCTACTGTGAATATTTTTTTTTTGAATTTTTATACTTCGCTGCTCC CAAATGAGCACCCCGAGAGAAGTCCAGGCTTCATGTACTTGCCCAGGAATTCCTTGTCCCCGGACCCGGAATCACTTGGCCTAATTCCGG TCAGTCTGCCTTTTCATTTCTGCAGGTGATGGTCAACCAGTCCCCGTACTCATAGGCCATGGGACACAAGATTATTATTATCATCATTAT TTTTAAAGACAGAGTCTCACTTTGTTGCCCAGGCTGGAGTGTAGTGGCACAATCTCAGCTCGCTGCAACCTCCACCTTCTGAGTTCAAGC GATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTGTGCCATCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGG TTTCACCATGTTGGCCAGGCTGGTCTGCATCTCCTGACCTCAAGTGATTCACCTGCTTCTGTCTCCCAAAGTGCTGGGAATACAGGCATG AGCCACCACTCCTGGACAGGCCACAGAAATTTTAAAGAAAAGAATCATGCCACCACAAGTAAACTTCATTTTGTTTATATTATTTAGGAC TTCACATTTGTCTTCCGAAACCATGAAGTATAATTCTGCTAACAGCAAGTGTTGTGAATGAGGAATTAGGAATTAGGAGAATGGTAGTAC ATTGGGAAAAACATATTTTAGTAATTTTTATATTTTAAAGATAATCACAGATTTTGCTGTTTGTGCATCACCAAAATCAGTGAGATCTGC CAGCTGGTGGGGGTGTGCCTATGAGAATTTTTGATTATGATCCCCTAGGAGGGTTATCAAAAAAGGAGATGGGTGAAAGATCAGGAGAGT CGAGAAATTCATTTTTTGGACAACATTGTTTTGAAGGCACTACTGGGGCTCTGGGATCAGGCAGCCAGATTGAAACCTGGCTCCTCCTTT TCCTAAGTTATTTAACCTCCCTGTGCCTCACTTTTTGTCAACCAGATAAGATAAGAAATGAGAGCAGGTCTGTTACCTCACAAGGTGGCT GTGAGTGTTGAAGACGTTTGTTGGGGGTTTGGGTGAAGCATGCAAACTCTGGTTGGTATGTGGCAGCCACTCAGCCTGTATTTATGATGA GGGAGGCATTCTAGGCACCCCTTCCAGGATGTTGGGTTGTTGGCTGGGTTTTACTTTAAAAAGCTCAGGGCCTAGAACATTCTAGAATCC AAGTACTTGCTCACATATATAATTATTTCTTTAGGATAATCTTTGATATAGACTTACGAGTCAAAGGGTATGTAAAATGTCAGCCCTTTT ACCTGTATTGCCAAATTGCCTTCAAAAGTTTCTGCTGTTTTGCCCTCCTACCCATAGTGATAACCTTAAATTGGAGTCAACACAAATTTG AGTGTGACTGTGTTAGACAGAAGGGATATATTAACAGGTAAAACTGGCCATGGCCCCTGCCCTTGTGGAGTATATGCTCTGTTGGTTCAT TTCCTCTGCATTCTAATTTTCTAGACTTGGGATCTTATTGTGGAGTTAAACAAAGCACCCTTAAAGTAGCAAGCGAGCAAAATAAAAGCA AGGAAAATCAGTTGGAACATAACTTATGTATTTTTTAGGATTAAGAGTAATTTAACTGAGTCAATTCAATATGTTTTTAAAGGTGTGATT CTTAAATTCTTTATGATTGTTTAGATTTCTATATCTTGGTAACATGAATACACACTTAATGAAAGATTTCAGTAATTTTTGATTTGGGAA TTAATCATAGTGGGAAAAACTGTTTAGGAAAACATGTCAGTGGAAATTAACTCGCCACAGTATGTAGTGTTAGGGAATAGCTTCTGTTCG GCATTTGATTTGAGTGCTGTATTCTGACATTTTTCAGGAACAAATACATGTGATTCATCTTCTATAAATATTTGCAGTTTCTTCAAGTTG AAATGAGAAAAGCTCGTAAATTGAGCACCAGGTCTAATAAATCATTCACTTACCCAAGAACAGAAAGACAGGAAAAGCTAGCATGTTAAT CTAATGAAAAAATCGAATGTTAAAAAACCAAGAAAGTAGAAGATATTTGACATTAACTTTCTAATCATTGATAATAATCTAATAATCATA ACATTATTCTTAAAACCTGAAAGAATGGATTCCTGCTCCCAATGTGTTTTTAATATCAACTTAAACTAAAATAATTTTTTTACCTATTTT TGGAAGCTTGGAAATTGAGATGTAGTTGTCTAATGTTAACCTAATTAAGAGAGCTTGGTGTGATTTCTCATATACAGCATCTAAATATTT AAGTTTTAATGTCTTCTAAAATATTATTACATTCTTCATACTATAGTTTTTTAACATCCTTTAGAAAACTTGTATCAGCTTCACTTTCAA ACCATGCTGGCATCGAACTCAGGTGTAGTGGTATCAGAATGTTATGAAATAATTTTTTATTTTCATTATAAACTCCATTTTTACAATAAA >97070_97070_4_URI1-EIF3H_URI1_chr19_30433571_ENST00000312051_EIF3H_chr8_117668244_ENST00000521861_length(amino acids)=212AA_BP=45 MRPAGPSWRRPPWRRPPTPRPLRPRPLPWFRCAPRMWRGCARSRKRLKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHEL LSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIA -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for URI1-EIF3H |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for URI1-EIF3H |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for URI1-EIF3H |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |