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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:USP6NL-UPF2 (FusionGDB2 ID:97621)

Fusion Gene Summary for USP6NL-UPF2

check button Fusion gene summary
Fusion gene informationFusion gene name: USP6NL-UPF2
Fusion gene ID: 97621
HgeneTgene
Gene symbol

USP6NL

UPF2

Gene ID

9712

26019

Gene nameUSP6 N-terminal likeUPF2 regulator of nonsense mediated mRNA decay
SynonymsRNTRE|TRE2NL|USP6NL-IT1HUPF2|RENT2|smg-3
Cytomap

10p14

10p14

Type of geneprotein-codingprotein-coding
DescriptionUSP6 N-terminal-like proteinrelated to the N-terminus of treregulator of nonsense transcripts 2FRS2/UPF2/LEMD3 fusionLEMD3/UPF2 fusionUPF2 regulator of nonsense transcripts homolognonsense mRNA reducing factor 2smg-3 homolog, nonsense mediated mRNA decay factorup-frameshift suppressor 2 homologyeast Upf2p h
Modification date2020031320200329
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000277575, ENST00000379237, 
ENST00000609104, ENST00000443016, 
ENST00000609853, 		ENST00000460569, 
ENST00000356352, ENST00000357604, 
ENST00000397053, 
Fusion gene scores* DoF score23 X 16 X 11=40488 X 12 X 4=384
# samples 3011
** MAII scorelog2(30/4048*10)=-3.75417488419843
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(11/384*10)=-1.8036027871965
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: USP6NL [Title/Abstract] AND UPF2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointUSP6NL(11523769)-UPF2(11985167), # samples:3
Anticipated loss of major functional domain due to fusion event.USP6NL-UPF2 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
USP6NL-UPF2 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneUSP6NL

GO:0043547

positive regulation of GTPase activity

17562788


check buttonFusion gene breakpoints across USP6NL (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across UPF2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-BR-4357-01AUSP6NLchr10

11532831

-UPF2chr10

11973781

-
ChimerDB4STADTCGA-BR-4357USP6NLchr10

11532830

-UPF2chr10

11973781

-
ChimerDB4STADTCGA-BR-8289-01AUSP6NLchr10

11523769

-UPF2chr10

11985167

-
ChiTaRS5.0N/ABG385736USP6NLchr10

11639628

-UPF2chr10

11998520

-


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Fusion Gene ORF analysis for USP6NL-UPF2

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000277575ENST00000460569USP6NLchr10

11532831

-UPF2chr10

11973781

-
5CDS-intronENST00000277575ENST00000460569USP6NLchr10

11532830

-UPF2chr10

11973781

-
5CDS-intronENST00000277575ENST00000460569USP6NLchr10

11523769

-UPF2chr10

11985167

-
5CDS-intronENST00000379237ENST00000460569USP6NLchr10

11532831

-UPF2chr10

11973781

-
5CDS-intronENST00000379237ENST00000460569USP6NLchr10

11532830

-UPF2chr10

11973781

-
5CDS-intronENST00000379237ENST00000460569USP6NLchr10

11523769

-UPF2chr10

11985167

-
5CDS-intronENST00000609104ENST00000460569USP6NLchr10

11532831

-UPF2chr10

11973781

-
5CDS-intronENST00000609104ENST00000460569USP6NLchr10

11532830

-UPF2chr10

11973781

-
5CDS-intronENST00000609104ENST00000460569USP6NLchr10

11523769

-UPF2chr10

11985167

-
5CDS-intronENST00000609104ENST00000460569USP6NLchr10

11639628

-UPF2chr10

11998520

-
Frame-shiftENST00000277575ENST00000356352USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000277575ENST00000357604USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000277575ENST00000397053USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000379237ENST00000356352USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000379237ENST00000357604USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000379237ENST00000397053USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000609104ENST00000356352USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000609104ENST00000356352USP6NLchr10

11639628

-UPF2chr10

11998520

-
Frame-shiftENST00000609104ENST00000357604USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000609104ENST00000357604USP6NLchr10

11639628

-UPF2chr10

11998520

-
Frame-shiftENST00000609104ENST00000397053USP6NLchr10

11523769

-UPF2chr10

11985167

-
Frame-shiftENST00000609104ENST00000397053USP6NLchr10

11639628

-UPF2chr10

11998520

-
In-frameENST00000277575ENST00000356352USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000277575ENST00000356352USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000277575ENST00000357604USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000277575ENST00000357604USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000277575ENST00000397053USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000277575ENST00000397053USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000379237ENST00000356352USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000379237ENST00000356352USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000379237ENST00000357604USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000379237ENST00000357604USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000379237ENST00000397053USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000379237ENST00000397053USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000609104ENST00000356352USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000609104ENST00000356352USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000609104ENST00000357604USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000609104ENST00000357604USP6NLchr10

11532830

-UPF2chr10

11973781

-
In-frameENST00000609104ENST00000397053USP6NLchr10

11532831

-UPF2chr10

11973781

-
In-frameENST00000609104ENST00000397053USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000277575ENST00000356352USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000277575ENST00000357604USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000277575ENST00000397053USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000379237ENST00000356352USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000379237ENST00000357604USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000379237ENST00000397053USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000443016ENST00000356352USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-3CDSENST00000443016ENST00000356352USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000443016ENST00000356352USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-3CDSENST00000443016ENST00000356352USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000443016ENST00000357604USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-3CDSENST00000443016ENST00000357604USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000443016ENST00000357604USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-3CDSENST00000443016ENST00000357604USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000443016ENST00000397053USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-3CDSENST00000443016ENST00000397053USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000443016ENST00000397053USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-3CDSENST00000443016ENST00000397053USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000609853ENST00000356352USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-3CDSENST00000609853ENST00000356352USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000609853ENST00000356352USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-3CDSENST00000609853ENST00000356352USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000609853ENST00000357604USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-3CDSENST00000609853ENST00000357604USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000609853ENST00000357604USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-3CDSENST00000609853ENST00000357604USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-3CDSENST00000609853ENST00000397053USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-3CDSENST00000609853ENST00000397053USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-3CDSENST00000609853ENST00000397053USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-3CDSENST00000609853ENST00000397053USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-intronENST00000277575ENST00000460569USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-intronENST00000379237ENST00000460569USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-intronENST00000443016ENST00000460569USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-intronENST00000443016ENST00000460569USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-intronENST00000443016ENST00000460569USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-intronENST00000443016ENST00000460569USP6NLchr10

11639628

-UPF2chr10

11998520

-
intron-intronENST00000609853ENST00000460569USP6NLchr10

11532831

-UPF2chr10

11973781

-
intron-intronENST00000609853ENST00000460569USP6NLchr10

11532830

-UPF2chr10

11973781

-
intron-intronENST00000609853ENST00000460569USP6NLchr10

11523769

-UPF2chr10

11985167

-
intron-intronENST00000609853ENST00000460569USP6NLchr10

11639628

-UPF2chr10

11998520

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000609104USP6NLchr1011532830-ENST00000356352UPF2chr1011973781-24879383651210281
ENST00000609104USP6NLchr1011532830-ENST00000357604UPF2chr1011973781-24879383651210281
ENST00000609104USP6NLchr1011532830-ENST00000397053UPF2chr1011973781-24869383651210281
ENST00000277575USP6NLchr1011532830-ENST00000356352UPF2chr1011973781-218663743909288
ENST00000277575USP6NLchr1011532830-ENST00000357604UPF2chr1011973781-218663743909288
ENST00000277575USP6NLchr1011532830-ENST00000397053UPF2chr1011973781-218563743909288
ENST00000379237USP6NLchr1011532830-ENST00000356352UPF2chr1011973781-222067159943294
ENST00000379237USP6NLchr1011532830-ENST00000357604UPF2chr1011973781-222067159943294
ENST00000379237USP6NLchr1011532830-ENST00000397053UPF2chr1011973781-221967159943294
ENST00000609104USP6NLchr1011532831-ENST00000356352UPF2chr1011973781-24879383651210281
ENST00000609104USP6NLchr1011532831-ENST00000357604UPF2chr1011973781-24879383651210281
ENST00000609104USP6NLchr1011532831-ENST00000397053UPF2chr1011973781-24869383651210281
ENST00000277575USP6NLchr1011532831-ENST00000356352UPF2chr1011973781-218663743909288
ENST00000277575USP6NLchr1011532831-ENST00000357604UPF2chr1011973781-218663743909288
ENST00000277575USP6NLchr1011532831-ENST00000397053UPF2chr1011973781-218563743909288
ENST00000379237USP6NLchr1011532831-ENST00000356352UPF2chr1011973781-222067159943294
ENST00000379237USP6NLchr1011532831-ENST00000357604UPF2chr1011973781-222067159943294
ENST00000379237USP6NLchr1011532831-ENST00000397053UPF2chr1011973781-221967159943294

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000609104ENST00000356352USP6NLchr1011532830-UPF2chr1011973781-0.0006641330.9993358
ENST00000609104ENST00000357604USP6NLchr1011532830-UPF2chr1011973781-0.0006641330.9993358
ENST00000609104ENST00000397053USP6NLchr1011532830-UPF2chr1011973781-0.0006731220.99932694
ENST00000277575ENST00000356352USP6NLchr1011532830-UPF2chr1011973781-0.0015135080.9984865
ENST00000277575ENST00000357604USP6NLchr1011532830-UPF2chr1011973781-0.0015135080.9984865
ENST00000277575ENST00000397053USP6NLchr1011532830-UPF2chr1011973781-0.0015411480.99845886
ENST00000379237ENST00000356352USP6NLchr1011532830-UPF2chr1011973781-0.0017973620.99820256
ENST00000379237ENST00000357604USP6NLchr1011532830-UPF2chr1011973781-0.0017973620.99820256
ENST00000379237ENST00000397053USP6NLchr1011532830-UPF2chr1011973781-0.0018206580.9981793
ENST00000609104ENST00000356352USP6NLchr1011532831-UPF2chr1011973781-0.0006641330.9993358
ENST00000609104ENST00000357604USP6NLchr1011532831-UPF2chr1011973781-0.0006641330.9993358
ENST00000609104ENST00000397053USP6NLchr1011532831-UPF2chr1011973781-0.0006731220.99932694
ENST00000277575ENST00000356352USP6NLchr1011532831-UPF2chr1011973781-0.0015135080.9984865
ENST00000277575ENST00000357604USP6NLchr1011532831-UPF2chr1011973781-0.0015135080.9984865
ENST00000277575ENST00000397053USP6NLchr1011532831-UPF2chr1011973781-0.0015411480.99845886
ENST00000379237ENST00000356352USP6NLchr1011532831-UPF2chr1011973781-0.0017973620.99820256
ENST00000379237ENST00000357604USP6NLchr1011532831-UPF2chr1011973781-0.0017973620.99820256
ENST00000379237ENST00000397053USP6NLchr1011532831-UPF2chr1011973781-0.0018206580.9981793

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Fusion Genomic Features for USP6NL-UPF2


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for USP6NL-UPF2


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr10:11523769/chr10:11985167)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneUSP6NLchr10:11532830chr10:11973781ENST00000277575-814100_292198846.0DomainRab-GAP TBC
HgeneUSP6NLchr10:11532830chr10:11973781ENST00000379237-814100_292204852.0DomainRab-GAP TBC
HgeneUSP6NLchr10:11532831chr10:11973781ENST00000277575-814100_292198846.0DomainRab-GAP TBC
HgeneUSP6NLchr10:11532831chr10:11973781ENST00000379237-814100_292204852.0DomainRab-GAP TBC
TgeneUPF2chr10:11532830chr10:11973781ENST000003563521721487_55911821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532830chr10:11973781ENST00000356352172154_13411821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532830chr10:11973781ENST000003576041822487_55911821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532830chr10:11973781ENST00000357604182254_13411821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532830chr10:11973781ENST000003970531822487_55911821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532830chr10:11973781ENST00000397053182254_13411821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532831chr10:11973781ENST000003563521721487_55911821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532831chr10:11973781ENST00000356352172154_13411821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532831chr10:11973781ENST000003576041822487_55911821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532831chr10:11973781ENST00000357604182254_13411821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532831chr10:11973781ENST000003970531822487_55911821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532831chr10:11973781ENST00000397053182254_13411821273.0Coiled coilOntology_term=ECO:0000255
TgeneUPF2chr10:11532830chr10:11973781ENST0000035635217211025_109411821273.0Compositional biasNote=Glu-rich
TgeneUPF2chr10:11532830chr10:11973781ENST0000035635217216_13611821273.0Compositional biasNote=Glu/Lys-rich
TgeneUPF2chr10:11532830chr10:11973781ENST0000035760418221025_109411821273.0Compositional biasNote=Glu-rich
TgeneUPF2chr10:11532830chr10:11973781ENST0000035760418226_13611821273.0Compositional biasNote=Glu/Lys-rich
TgeneUPF2chr10:11532830chr10:11973781ENST0000039705318221025_109411821273.0Compositional biasNote=Glu-rich
TgeneUPF2chr10:11532830chr10:11973781ENST0000039705318226_13611821273.0Compositional biasNote=Glu/Lys-rich
TgeneUPF2chr10:11532831chr10:11973781ENST0000035635217211025_109411821273.0Compositional biasNote=Glu-rich
TgeneUPF2chr10:11532831chr10:11973781ENST0000035635217216_13611821273.0Compositional biasNote=Glu/Lys-rich
TgeneUPF2chr10:11532831chr10:11973781ENST0000035760418221025_109411821273.0Compositional biasNote=Glu-rich
TgeneUPF2chr10:11532831chr10:11973781ENST0000035760418226_13611821273.0Compositional biasNote=Glu/Lys-rich
TgeneUPF2chr10:11532831chr10:11973781ENST0000039705318221025_109411821273.0Compositional biasNote=Glu-rich
TgeneUPF2chr10:11532831chr10:11973781ENST0000039705318226_13611821273.0Compositional biasNote=Glu/Lys-rich
TgeneUPF2chr10:11532830chr10:11973781ENST000003563521721168_43111821273.0DomainNote=MIF4G 1
TgeneUPF2chr10:11532830chr10:11973781ENST000003563521721569_75811821273.0DomainNote=MIF4G 2
TgeneUPF2chr10:11532830chr10:11973781ENST000003563521721773_98611821273.0DomainNote=MIF4G 3
TgeneUPF2chr10:11532830chr10:11973781ENST000003576041822168_43111821273.0DomainNote=MIF4G 1
TgeneUPF2chr10:11532830chr10:11973781ENST000003576041822569_75811821273.0DomainNote=MIF4G 2
TgeneUPF2chr10:11532830chr10:11973781ENST000003576041822773_98611821273.0DomainNote=MIF4G 3
TgeneUPF2chr10:11532830chr10:11973781ENST000003970531822168_43111821273.0DomainNote=MIF4G 1
TgeneUPF2chr10:11532830chr10:11973781ENST000003970531822569_75811821273.0DomainNote=MIF4G 2
TgeneUPF2chr10:11532830chr10:11973781ENST000003970531822773_98611821273.0DomainNote=MIF4G 3
TgeneUPF2chr10:11532831chr10:11973781ENST000003563521721168_43111821273.0DomainNote=MIF4G 1
TgeneUPF2chr10:11532831chr10:11973781ENST000003563521721569_75811821273.0DomainNote=MIF4G 2
TgeneUPF2chr10:11532831chr10:11973781ENST000003563521721773_98611821273.0DomainNote=MIF4G 3
TgeneUPF2chr10:11532831chr10:11973781ENST000003576041822168_43111821273.0DomainNote=MIF4G 1
TgeneUPF2chr10:11532831chr10:11973781ENST000003576041822569_75811821273.0DomainNote=MIF4G 2
TgeneUPF2chr10:11532831chr10:11973781ENST000003576041822773_98611821273.0DomainNote=MIF4G 3
TgeneUPF2chr10:11532831chr10:11973781ENST000003970531822168_43111821273.0DomainNote=MIF4G 1
TgeneUPF2chr10:11532831chr10:11973781ENST000003970531822569_75811821273.0DomainNote=MIF4G 2
TgeneUPF2chr10:11532831chr10:11973781ENST000003970531822773_98611821273.0DomainNote=MIF4G 3


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Fusion Gene Sequence for USP6NL-UPF2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>97621_97621_1_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000277575_UPF2_chr10_11973781_ENST00000356352_length(transcript)=2186nt_BP=637nt
ACTATAAAATAATAATGAAATCTTGGAATAGATAAGTTACTCTATGAGGACTGAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTATCT
CACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGC
AGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCA
TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAA
CACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAAT
GAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACATCAGACAAATAGACCTGGATGTCAA
CCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTA
TAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGAT
GAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGC
TCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAG
GAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCA
GTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCC
AACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGG
CAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGT
TGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAAG
AAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATCTTCTAGTAAAACTTACATGCAGGACAACAAA
ATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAA
AATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAATGTGGAGACTATTTTACTATACAGAGAGCAT
TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAAAACATGCCC
GTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTTGACCTTCATGGGTTTACAGCCTCTGTCTCTA
AACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTTTTTTGTTTTCCCCCACTAAATAGAAATGAGG
GTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGA
GCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTCTTTTACCATGTTTCAGTTTCTGCATGTAGAT
TTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCG

>97621_97621_1_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000277575_UPF2_chr10_11973781_ENST00000356352_length(amino acids)=288AA_BP=198
MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIER
TTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG
VKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQH

--------------------------------------------------------------
>97621_97621_2_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000277575_UPF2_chr10_11973781_ENST00000357604_length(transcript)=2186nt_BP=637nt
ACTATAAAATAATAATGAAATCTTGGAATAGATAAGTTACTCTATGAGGACTGAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTATCT
CACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGC
AGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCA
TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAA
CACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAAT
GAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACATCAGACAAATAGACCTGGATGTCAA
CCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTA
TAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGAT
GAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGC
TCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAG
GAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCA
GTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCC
AACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGG
CAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGT
TGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAAG
AAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATCTTCTAGTAAAACTTACATGCAGGACAACAAA
ATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAA
AATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAATGTGGAGACTATTTTACTATACAGAGAGCAT
TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAAAACATGCCC
GTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTTGACCTTCATGGGTTTACAGCCTCTGTCTCTA
AACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTTTTTTGTTTTCCCCCACTAAATAGAAATGAGG
GTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGA
GCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTCTTTTACCATGTTTCAGTTTCTGCATGTAGAT
TTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCG

>97621_97621_2_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000277575_UPF2_chr10_11973781_ENST00000357604_length(amino acids)=288AA_BP=198
MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIER
TTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG
VKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQH

--------------------------------------------------------------
>97621_97621_3_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000277575_UPF2_chr10_11973781_ENST00000397053_length(transcript)=2185nt_BP=637nt
ACTATAAAATAATAATGAAATCTTGGAATAGATAAGTTACTCTATGAGGACTGAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTATCT
CACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGC
AGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCA
TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAA
CACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAAT
GAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACATCAGACAAATAGACCTGGATGTCAA
CCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTA
TAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGAT
GAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGC
TCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAG
GAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCA
GTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCC
AACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGG
CAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGT
TGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAAG
AAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATCTTCTAGTAAAACTTACATGCAGGACAACAAA
ATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAA
AATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAATGTGGAGACTATTTTACTATACAGAGAGCAT
TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAAAACATGCCC
GTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTTGACCTTCATGGGTTTACAGCCTCTGTCTCTA
AACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTTTTTTGTTTTCCCCCACTAAATAGAAATGAGG
GTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGA
GCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTCTTTTACCATGTTTCAGTTTCTGCATGTAGAT
TTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCG

>97621_97621_3_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000277575_UPF2_chr10_11973781_ENST00000397053_length(amino acids)=288AA_BP=198
MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIER
TTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG
VKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQH

--------------------------------------------------------------
>97621_97621_4_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000379237_UPF2_chr10_11973781_ENST00000356352_length(transcript)=2220nt_BP=671nt
GATGAAACCTGTTGGATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGC
TGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAA
TAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGAT
TTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGC
TGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTG
AAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTT
CACCTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAAT
CCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACT
GGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATC
AAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCAC
CTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTG
GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGG
CTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGA
AATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCG
TGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTT
CAGTGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAA
ATCTTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAA
TTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAA
AAATGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGC
CCATTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTT
GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTT
TTTTTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTT
GCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTT
TTCTTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCA

>97621_97621_4_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000379237_UPF2_chr10_11973781_ENST00000356352_length(amino acids)=294AA_BP=204
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQK
HLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER

--------------------------------------------------------------
>97621_97621_5_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000379237_UPF2_chr10_11973781_ENST00000357604_length(transcript)=2220nt_BP=671nt
GATGAAACCTGTTGGATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGC
TGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAA
TAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGAT
TTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGC
TGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTG
AAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTT
CACCTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAAT
CCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACT
GGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATC
AAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCAC
CTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTG
GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGG
CTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGA
AATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCG
TGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTT
CAGTGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAA
ATCTTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAA
TTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAA
AAATGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGC
CCATTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTT
GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTT
TTTTTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTT
GCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTT
TTCTTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCA

>97621_97621_5_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000379237_UPF2_chr10_11973781_ENST00000357604_length(amino acids)=294AA_BP=204
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQK
HLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER

--------------------------------------------------------------
>97621_97621_6_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000379237_UPF2_chr10_11973781_ENST00000397053_length(transcript)=2219nt_BP=671nt
GATGAAACCTGTTGGATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGC
TGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAA
TAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGAT
TTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGC
TGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTG
AAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTT
CACCTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAAT
CCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACT
GGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATC
AAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCAC
CTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTG
GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGG
CTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGA
AATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCG
TGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTT
CAGTGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAA
ATCTTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAA
TTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAA
AAATGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGC
CCATTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTT
GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTT
TTTTTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTT
GCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTT
TTCTTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCA

>97621_97621_6_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000379237_UPF2_chr10_11973781_ENST00000397053_length(amino acids)=294AA_BP=204
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQK
HLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER

--------------------------------------------------------------
>97621_97621_7_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000609104_UPF2_chr10_11973781_ENST00000356352_length(transcript)=2487nt_BP=938nt
CGGCCGCTGCGGTGACGGTTGGCGGCGGCCGGTGAGGCGGGCGGGGCCGGAGGCGCGGAGGCGGGGTCCCGGGCGAGCCGCCCTGGGAGG
CGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAG
GGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTGCTCGGCCGCCCGGGACCGCCAGC
TCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAGAAACCTTGGACAGCAGATTTTGGTTTAATA
TCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAG
TTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTG
GCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGA
AAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAG
TCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCAC
CTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCT
TATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGA
ACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAG
AAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTA
ATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTT
AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
GGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAAT
CTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGA
AGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAG
TGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATC
TTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTT
GTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAA
TGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA
TTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTT
GACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTT
TTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCT
TTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTC
TTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATC

>97621_97621_7_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000609104_UPF2_chr10_11973781_ENST00000356352_length(amino acids)=281AA_BP=191
MGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKM
LKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF
HVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA

--------------------------------------------------------------
>97621_97621_8_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000609104_UPF2_chr10_11973781_ENST00000357604_length(transcript)=2487nt_BP=938nt
CGGCCGCTGCGGTGACGGTTGGCGGCGGCCGGTGAGGCGGGCGGGGCCGGAGGCGCGGAGGCGGGGTCCCGGGCGAGCCGCCCTGGGAGG
CGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAG
GGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTGCTCGGCCGCCCGGGACCGCCAGC
TCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAGAAACCTTGGACAGCAGATTTTGGTTTAATA
TCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAG
TTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTG
GCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGA
AAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAG
TCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCAC
CTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCT
TATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGA
ACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAG
AAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTA
ATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTT
AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
GGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAAT
CTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGA
AGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAG
TGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATC
TTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTT
GTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAA
TGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA
TTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTT
GACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTT
TTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCT
TTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTC
TTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATC

>97621_97621_8_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000609104_UPF2_chr10_11973781_ENST00000357604_length(amino acids)=281AA_BP=191
MGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKM
LKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF
HVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA

--------------------------------------------------------------
>97621_97621_9_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000609104_UPF2_chr10_11973781_ENST00000397053_length(transcript)=2486nt_BP=938nt
CGGCCGCTGCGGTGACGGTTGGCGGCGGCCGGTGAGGCGGGCGGGGCCGGAGGCGCGGAGGCGGGGTCCCGGGCGAGCCGCCCTGGGAGG
CGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAG
GGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTGCTCGGCCGCCCGGGACCGCCAGC
TCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAGAAACCTTGGACAGCAGATTTTGGTTTAATA
TCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAG
TTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTG
GCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGA
AAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAG
TCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCAC
CTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCT
TATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGA
ACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAG
AAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTA
ATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTT
AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
GGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAAT
CTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGA
AGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAG
TGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATC
TTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTT
GTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAA
TGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA
TTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTT
GACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTT
TTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCT
TTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTC
TTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATC

>97621_97621_9_USP6NL-UPF2_USP6NL_chr10_11532830_ENST00000609104_UPF2_chr10_11973781_ENST00000397053_length(amino acids)=281AA_BP=191
MGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKM
LKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF
HVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA

--------------------------------------------------------------
>97621_97621_10_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000277575_UPF2_chr10_11973781_ENST00000356352_length(transcript)=2186nt_BP=637nt
ACTATAAAATAATAATGAAATCTTGGAATAGATAAGTTACTCTATGAGGACTGAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTATCT
CACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGC
AGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCA
TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAA
CACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAAT
GAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACATCAGACAAATAGACCTGGATGTCAA
CCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTA
TAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGAT
GAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGC
TCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAG
GAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCA
GTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCC
AACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGG
CAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGT
TGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAAG
AAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATCTTCTAGTAAAACTTACATGCAGGACAACAAA
ATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAA
AATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAATGTGGAGACTATTTTACTATACAGAGAGCAT
TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAAAACATGCCC
GTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTTGACCTTCATGGGTTTACAGCCTCTGTCTCTA
AACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTTTTTTGTTTTCCCCCACTAAATAGAAATGAGG
GTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGA
GCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTCTTTTACCATGTTTCAGTTTCTGCATGTAGAT
TTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCG

>97621_97621_10_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000277575_UPF2_chr10_11973781_ENST00000356352_length(amino acids)=288AA_BP=198
MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIER
TTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG
VKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQH

--------------------------------------------------------------
>97621_97621_11_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000277575_UPF2_chr10_11973781_ENST00000357604_length(transcript)=2186nt_BP=637nt
ACTATAAAATAATAATGAAATCTTGGAATAGATAAGTTACTCTATGAGGACTGAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTATCT
CACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGC
AGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCA
TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAA
CACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAAT
GAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACATCAGACAAATAGACCTGGATGTCAA
CCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTA
TAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGAT
GAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGC
TCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAG
GAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCA
GTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCC
AACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGG
CAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGT
TGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAAG
AAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATCTTCTAGTAAAACTTACATGCAGGACAACAAA
ATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAA
AATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAATGTGGAGACTATTTTACTATACAGAGAGCAT
TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAAAACATGCCC
GTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTTGACCTTCATGGGTTTACAGCCTCTGTCTCTA
AACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTTTTTTGTTTTCCCCCACTAAATAGAAATGAGG
GTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGA
GCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTCTTTTACCATGTTTCAGTTTCTGCATGTAGAT
TTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCG

>97621_97621_11_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000277575_UPF2_chr10_11973781_ENST00000357604_length(amino acids)=288AA_BP=198
MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIER
TTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG
VKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQH

--------------------------------------------------------------
>97621_97621_12_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000277575_UPF2_chr10_11973781_ENST00000397053_length(transcript)=2185nt_BP=637nt
ACTATAAAATAATAATGAAATCTTGGAATAGATAAGTTACTCTATGAGGACTGAAGCTGTTGTTAATTCCCAAGGCCAGACTGATTATCT
CACAAAGGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAGAGGACGAGAAGGTGC
AGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCA
TAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAA
CACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAAT
GAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACATCAGACAAATAGACCTGGATGTCAA
CCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTA
TAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGAACCAGCAACAGGCAGAACAAGAAGAGAGGAT
GAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGC
TCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTAATGCAGATCTAATCTTTAAGACTGGTGGGAG
GAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCA
GTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCC
AACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAATCTCGCGAGGGTTAATCTTCTCTTGAGAATGG
CAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGAAGGAGATGATTGAGCCAGAGAAGAAACGGGT
TGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAGTGTCTCTGAATTGAACATCCCACGTTGGAAG
AAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATCTTCTAGTAAAACTTACATGCAGGACAACAAA
ATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAA
AATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAATGTGGAGACTATTTTACTATACAGAGAGCAT
TAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCATTGTAAGTATCATTGAAAACAAAACATGCCC
GTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTTGACCTTCATGGGTTTACAGCCTCTGTCTCTA
AACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTTTTTTGTTTTCCCCCACTAAATAGAAATGAGG
GTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGA
GCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTCTTTTACCATGTTTCAGTTTCTGCATGTAGAT
TTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCG

>97621_97621_12_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000277575_UPF2_chr10_11973781_ENST00000397053_length(amino acids)=288AA_BP=198
MRTEAVVNSQGQTDYLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIER
TTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYG
VKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQH

--------------------------------------------------------------
>97621_97621_13_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000379237_UPF2_chr10_11973781_ENST00000356352_length(transcript)=2220nt_BP=671nt
GATGAAACCTGTTGGATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGC
TGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAA
TAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGAT
TTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGC
TGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTG
AAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTT
CACCTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAAT
CCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACT
GGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATC
AAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCAC
CTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTG
GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGG
CTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGA
AATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCG
TGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTT
CAGTGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAA
ATCTTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAA
TTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAA
AAATGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGC
CCATTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTT
GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTT
TTTTTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTT
GCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTT
TTCTTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCA

>97621_97621_13_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000379237_UPF2_chr10_11973781_ENST00000356352_length(amino acids)=294AA_BP=204
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQK
HLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER

--------------------------------------------------------------
>97621_97621_14_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000379237_UPF2_chr10_11973781_ENST00000357604_length(transcript)=2220nt_BP=671nt
GATGAAACCTGTTGGATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGC
TGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAA
TAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGAT
TTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGC
TGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTG
AAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTT
CACCTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAAT
CCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACT
GGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATC
AAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCAC
CTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTG
GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGG
CTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGA
AATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCG
TGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTT
CAGTGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAA
ATCTTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAA
TTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAA
AAATGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGC
CCATTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTT
GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTT
TTTTTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTT
GCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTT
TTCTTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCA

>97621_97621_14_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000379237_UPF2_chr10_11973781_ENST00000357604_length(amino acids)=294AA_BP=204
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQK
HLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER

--------------------------------------------------------------
>97621_97621_15_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000379237_UPF2_chr10_11973781_ENST00000397053_length(transcript)=2219nt_BP=671nt
GATGAAACCTGTTGGATTTCTAGAGGAAGCAGCTGGAGTCTTTGGCTTGTTAACTAGCAATGATTCAAGTCTTGCAGATTGTAAAGGAGC
TGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGGAAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAA
TAGTTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGAT
TTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGC
TGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTG
AAGTCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTT
CACCTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAAT
CCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACT
GGAACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATC
AAGAAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCAC
CTAATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTG
GTTAGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGG
CTGGGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGA
AATCTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCG
TGAAGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTT
CAGTGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAA
ATCTTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAA
TTTGTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAA
AAATGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGC
CCATTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTT
GTTGACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTT
TTTTTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTT
GCTTTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTT
TTCTTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCA

>97621_97621_15_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000379237_UPF2_chr10_11973781_ENST00000397053_length(amino acids)=294AA_BP=204
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQK
HLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER

--------------------------------------------------------------
>97621_97621_16_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000609104_UPF2_chr10_11973781_ENST00000356352_length(transcript)=2487nt_BP=938nt
CGGCCGCTGCGGTGACGGTTGGCGGCGGCCGGTGAGGCGGGCGGGGCCGGAGGCGCGGAGGCGGGGTCCCGGGCGAGCCGCCCTGGGAGG
CGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAG
GGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTGCTCGGCCGCCCGGGACCGCCAGC
TCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAGAAACCTTGGACAGCAGATTTTGGTTTAATA
TCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAG
TTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTG
GCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGA
AAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAG
TCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCAC
CTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCT
TATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGA
ACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAG
AAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTA
ATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTT
AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
GGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAAT
CTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGA
AGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAG
TGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATC
TTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTT
GTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAA
TGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA
TTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTT
GACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTT
TTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCT
TTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTC
TTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATC

>97621_97621_16_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000609104_UPF2_chr10_11973781_ENST00000356352_length(amino acids)=281AA_BP=191
MGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKM
LKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF
HVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA

--------------------------------------------------------------
>97621_97621_17_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000609104_UPF2_chr10_11973781_ENST00000357604_length(transcript)=2487nt_BP=938nt
CGGCCGCTGCGGTGACGGTTGGCGGCGGCCGGTGAGGCGGGCGGGGCCGGAGGCGCGGAGGCGGGGTCCCGGGCGAGCCGCCCTGGGAGG
CGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAG
GGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTGCTCGGCCGCCCGGGACCGCCAGC
TCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAGAAACCTTGGACAGCAGATTTTGGTTTAATA
TCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAG
TTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTG
GCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGA
AAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAG
TCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCAC
CTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCT
TATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGA
ACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAG
AAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTA
ATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTT
AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
GGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAAT
CTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGA
AGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAG
TGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATC
TTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTT
GTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAA
TGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA
TTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTT
GACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTT
TTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCT
TTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTC
TTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATC

>97621_97621_17_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000609104_UPF2_chr10_11973781_ENST00000357604_length(amino acids)=281AA_BP=191
MGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKM
LKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF
HVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA

--------------------------------------------------------------
>97621_97621_18_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000609104_UPF2_chr10_11973781_ENST00000397053_length(transcript)=2486nt_BP=938nt
CGGCCGCTGCGGTGACGGTTGGCGGCGGCCGGTGAGGCGGGCGGGGCCGGAGGCGCGGAGGCGGGGTCCCGGGCGAGCCGCCCTGGGAGG
CGGGGGCCGTTTCCATAGCGGCGGCAGGAGGTGTCGCGCCGGGGAACTTCCTGGTTCCCGGGCTCGGCTTCGCCGGGATCCTCTTGGAAG
GGAAACAATGGGGCGGAGGGCACTGCGGTAGCCGCCGCCGCCGCCGCGCCGCGCCGCGCCGGATCTGCTCGGCCGCCCGGGACCGCCAGC
TCTGTCCGCTGCCCACAGCCTAGCAGTCGGGACCGTACTGAGGACATGTATTCCTCTGAGAAACCTTGGACAGCAGATTTTGGTTTAATA
TCTGATTGGGACAACATTCAGACCCATTTCCAGTCATGAATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAG
TTGCTAAATATGACAGAGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGATTTG
GCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAATTGAAAGAACTACCAAATGGCTGA
AAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAG
TCTGGGCCCTCCTTCTTGAGATCCCTAAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCAC
CTGACATCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGTTAAGCAACAATCCT
TATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGTTTAAGATCCTTAATGTACCCATGTCCTCTCAACTTGCTGCAAATCACTGGA
ACCAGCAACAGGCAGAACAAGAAGAGAGGATGAGAATGAAAAAGCTCACACTAGATATCAATGAACGGCAAGAACAAGAAGATTATCAAG
AAATGTTGCAGTCTCTTGCACAGCGCCCAGCTCCAGCAAACACCAATCGTGAGAGGCGGCCTCGCTACCAACATCCGAAGGGAGCACCTA
ATGCAGATCTAATCTTTAAGACTGGTGGGAGGAGACGTTGATCCAGCAGCACGTGTCATTTCATTAGGTCCTGTATCTGATGTTGTGGTT
AGTGGAGTCCTCCAGCAATTGAATGAGAGCAGTGGACACATCTCAGCAGGTCGGTCTAGAGAGTTGCGAATCTAAACCTGGGACAGGCTG
GGGCCAGGAGGCAGAAACACCAGCCTCTGCCAACACCGGAACAAGCCGACGCTTCCAGACAAGGCGGAAAAGGCCTTTTGTAATGGAAAT
CTCGCGAGGGTTAATCTTCTCTTGAGAATGGCAGTCAAGAAATGAGATGGTTCACTTGACTACTGAGCAGTTACACCAAGGAGAGCGTGA
AGGAGATGATTGAGCCAGAGAAGAAACGGGTTGTGATGGTAATGGTGTGGGGGAAATGAACTTGAGCTTTAAACTTGATTTGAGTTTCAG
TGTCTCTGAATTGAACATCCCACGTTGGAAGAAGATACATTTGGGGGCTCCAGGACTACAGTAGAAAAGTATAGAGCAAGCAGGAAAATC
TTCTAGTAAAACTTACATGCAGGACAACAAAATGATGAAAGATATCCAAATACCAGATAATCCACCAGGAAGGCTTTTGTTTAGGAATTT
GTTTCAAGAGGAACAAGGGATGAGGGAGAAAAATCCGTTTTATCCATCAGAGTCAGTGCTATAAAATTGCCTATTAAGGTAAAAGAAAAA
TGTGGAGACTATTTTACTATACAGAGAGCATTAATTCAGATGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA
TTGTAAGTATCATTGAAAACAAAACATGCCCGTCAACATGTCACAGAAAACGAACGAAGGACAACAAGAAGTGGATGAGAATATTTTGTT
GACCTTCATGGGTTTACAGCCTCTGTCTCTAAACAAAGTATGGAAACAAGTAGAGCTTTTATTTTGCTTTTGTTTTTGTTTTGTTTTTTT
TTTTGTTTTCCCCCACTAAATAGAAATGAGGGTCCTTAGTCTGTTTCTGACAATCTGTTAATTTCTTAGGACAGCTGTCTTTGGTTTGCT
TTCCAGCAGGCGTAGTATATTTAGTCGGAGAGCACATCTGTATGCGACAACTTGATTACATCTTTTTTTCTAGCTATTTTGCATTTTTTC
TTTTACCATGTTTCAGTTTCTGCATGTAGATTTAAATAAAAAACAAAACTTGTAAAGTTGTAACATTTCACATGGAAATGCTGCCCAATC

>97621_97621_18_USP6NL-UPF2_USP6NL_chr10_11532831_ENST00000609104_UPF2_chr10_11973781_ENST00000397053_length(amino acids)=281AA_BP=191
MGQHSDPFPVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKM
LKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLF
HVLAAYSIYNTFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA

--------------------------------------------------------------

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Fusion Gene PPI Analysis for USP6NL-UPF2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneUPF2chr10:11532830chr10:11973781ENST0000035635217211105_11291182.01273.0UPF1
TgeneUPF2chr10:11532830chr10:11973781ENST0000035635217211167_12071182.01273.0UPF1
TgeneUPF2chr10:11532830chr10:11973781ENST0000035760418221105_11291182.01273.0UPF1
TgeneUPF2chr10:11532830chr10:11973781ENST0000035760418221167_12071182.01273.0UPF1
TgeneUPF2chr10:11532830chr10:11973781ENST0000039705318221105_11291182.01273.0UPF1
TgeneUPF2chr10:11532830chr10:11973781ENST0000039705318221167_12071182.01273.0UPF1
TgeneUPF2chr10:11532831chr10:11973781ENST0000035635217211105_11291182.01273.0UPF1
TgeneUPF2chr10:11532831chr10:11973781ENST0000035635217211167_12071182.01273.0UPF1
TgeneUPF2chr10:11532831chr10:11973781ENST0000035760418221105_11291182.01273.0UPF1
TgeneUPF2chr10:11532831chr10:11973781ENST0000035760418221167_12071182.01273.0UPF1
TgeneUPF2chr10:11532831chr10:11973781ENST0000039705318221105_11291182.01273.0UPF1
TgeneUPF2chr10:11532831chr10:11973781ENST0000039705318221167_12071182.01273.0UPF1


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for USP6NL-UPF2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for USP6NL-UPF2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource