FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
leaf

Fusion Gene and Fusion Protein Summary

leaf

Fusion Amino Acid Sequences (multiple BPs and multiple gene isoforms)

leaf

Fusion Protein Breakpoint Sequences - (for the Screening of the FusionNeoAntigens)

leaf

Potential FusionNeoAntigens in HLA I - (netMHCpan v4.1 + deepHLApan v1.1)

leaf

Potential FusionNeoAntigens in HLA II - (netMHCIIpan v4.1)

leaf

Fusion Breakpoint 14 AA Peptide Structure - (RoseTTAFold)

leaf

Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D - (Glide)

leaf

Vaccine Design for the FusionNeoAntigens (RNA/protein sequences)

leaf

Potential target of CAR-T therapy development

leaf

Information on the samples that have these potential fusion neoantigens

leaf

Fusion Protein Targeting Drugs - (Manual Curation)

leaf

Fusion Protein Related diseases - (Manual Curation)

Fusion Protein:CHD2-MYH9

Fusion Gene and Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: CHD2-MYH9
FusionPDB ID: 16303
FusionGDB2.0 ID: 16303
HgeneTgene
Gene symbol

CHD2

MYH9

Gene ID

1826

4627

Gene nameDS cell adhesion moleculemyosin heavy chain 9
SynonymsCHD2|CHD2-42|CHD2-52BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA
Cytomap

21q22.2

22q12.3

Type of geneprotein-codingprotein-coding
DescriptionDown syndrome cell adhesion moleculemyosin-9cellular myosin heavy chain, type Amyosin, heavy chain 9, non-musclenon-muscle myosin heavy chain 9non-muscle myosin heavy chain Anon-muscle myosin heavy chain IIanon-muscle myosin heavy polypeptide 9nonmuscle myosin heavy chain II-A
Modification date2020031320200315
UniProtAcc

O14647

Main function of 5'-partner protein: FUNCTION: DNA-binding helicase that specifically binds to the promoter of target genes, leading to chromatin remodeling, possibly by promoting deposition of histone H3.3. Involved in myogenesis via interaction with MYOD1: binds to myogenic gene regulatory sequences and mediates incorporation of histone H3.3 prior to the onset of myogenic gene expression, promoting their expression (By similarity). {ECO:0000250}.

P35579

Main function of 5'-partner protein: FUNCTION: Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping. Promotes also cell motility together with S100A4 (PubMed:16707441). During cell spreading, plays an important role in cytoskeleton reorganization, focal contacts formation (in the margins but not the central part of spreading cells), and lamellipodial retraction; this function is mechanically antagonized by MYH10 (PubMed:20052411). {ECO:0000250|UniProtKB:Q8VDD5, ECO:0000269|PubMed:16707441, ECO:0000269|PubMed:20052411}.
Ensembl transtripts involved in fusion geneENST idsENST00000554122, ENST00000394196, 
ENST00000420239, ENST00000557381, 
ENST00000536619, 
ENST00000216181, 
ENST00000401701, ENST00000475726, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score22 X 13 X 11=314644 X 46 X 15=30360
# samples 2356
** MAII scorelog2(23/3146*10)=-3.77381290447131
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(56/30360*10)=-5.76060115335786
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Fusion gene context

PubMed: CHD2 [Title/Abstract] AND MYH9 [Title/Abstract] AND fusion [Title/Abstract]

Fusion neoantigen context

PubMed: CHD2 [Title/Abstract] AND MYH9 [Title/Abstract] AND neoantigen [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)CHD2(93444529)-MYH9(36701148), # samples:1
Anticipated loss of major functional domain due to fusion event.CHD2-MYH9 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
CHD2-MYH9 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
CHD2-MYH9 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
CHD2-MYH9 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCHD2

GO:0042327

positive regulation of phosphorylation

19196994

HgeneCHD2

GO:0048842

positive regulation of axon extension involved in axon guidance

18585357

TgeneMYH9

GO:0001525

angiogenesis

16403913

TgeneMYH9

GO:0001778

plasma membrane repair

27325790

TgeneMYH9

GO:0006509

membrane protein ectodomain proteolysis

16186248

TgeneMYH9

GO:0030048

actin filament-based movement

12237319|15845534

TgeneMYH9

GO:0031032

actomyosin structure organization

24072716



check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr15:93444529/chr22:36701148)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonRetention analysis results of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features, are available here.

check buttonFusion gene breakpoints across CHD2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across MYH9 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


Top

Fusion Amino Acid Sequences


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000394196CHD2chr1593444529+ENST00000216181MYH9chr2236701148-62411130106848531261
ENST00000557381CHD2chr1593444529+ENST00000216181MYH9chr2236701148-588076970744921261
ENST00000420239CHD2chr1593444529+ENST00000216181MYH9chr2236701148-573462356143461261

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000394196ENST00000216181CHD2chr1593444529+MYH9chr2236701148-0.0193800160.98062
ENST00000557381ENST00000216181CHD2chr1593444529+MYH9chr2236701148-0.0188191350.9811809
ENST00000420239ENST00000216181CHD2chr1593444529+MYH9chr2236701148-0.0194213930.98057866

check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.

Get the fusion protein sequences from here.

Fusion protein sequence information is available in the fasta format.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

Top

Fusion Protein Breakpoint Sequences for CHD2-MYH9

check button +/-13 AA sequence from the breakpoints of the fusion protein sequences.
HgeneHchrHbpTgeneTchrTbpLength(fusion protein)BP in fusion proteinPeptide
CHD2chr1593444529MYH9chr2236701148113020SQEEDSSLHSNASRYEILTPNSIPKG
CHD2chr1593444529MYH9chr223670114862320SQEEDSSLHSNASRYEILTPNSIPKG
CHD2chr1593444529MYH9chr223670114876920SQEEDSSLHSNASRYEILTPNSIPKG

Top

Potential FusionNeoAntigen Information of CHD2-MYH9 in HLA I

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
CHD2-MYH9_93444529_36701148.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5)
Fusion geneHchrHbpTgeneTchrTbpHLA IFusionNeoAntigen peptideBinding scoreImmunogenic scoreNeoantigen start (at BP 13)Neoantigen end (at BP 13)
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:18LHSNASRY0.97220.5567715
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:01SLHSNASRY0.99930.8692615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:25SLHSNASRY0.99310.8495615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:02SLHSNASRY0.98170.8699615
CHD2-MYH9chr1593444529chr22367011481130HLA-A74:03SSLHSNASR0.97430.5768514
CHD2-MYH9chr1593444529chr22367011481130HLA-A74:09SSLHSNASR0.97430.5768514
CHD2-MYH9chr1593444529chr22367011481130HLA-A74:11SSLHSNASR0.97430.5768514
CHD2-MYH9chr1593444529chr22367011481130HLA-B14:02SNASRYEIL0.89850.5987918
CHD2-MYH9chr1593444529chr22367011481130HLA-B14:01SNASRYEIL0.89850.5987918
CHD2-MYH9chr1593444529chr22367011481130HLA-A31:02SSLHSNASR0.86450.5152514
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:03SLHSNASRY0.46220.6391615
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:02SRYEILTPNSI10.76791223
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:04SRYEILTPNSI0.99990.83761223
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:05SRYEILTPNSI0.99990.94591223
CHD2-MYH9chr1593444529chr22367011481130HLA-B38:01LHSNASRYEIL0.99660.9454718
CHD2-MYH9chr1593444529chr22367011481130HLA-B73:01SRYEILTP0.99730.61651220
CHD2-MYH9chr1593444529chr22367011481130HLA-C15:06HSNASRYEI0.99860.9011817
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:07SLHSNASRY0.99690.6102615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:21SLHSNASRY0.98270.8563615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:04SLHSNASRY0.80920.8729615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:05SLHSNASRY0.79420.7987615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:31SLHSNASRY0.67230.8105615
CHD2-MYH9chr1593444529chr22367011481130HLA-B14:03SNASRYEIL0.63740.7305918
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:14SRYEILTPNS0.99640.93231222
CHD2-MYH9chr1593444529chr22367011481130HLA-B73:01SRYEILTPNS0.97550.63991222
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:14SRYEILTPNSI0.99990.90361223
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:03SRYEILTPNSI0.99790.95741223
CHD2-MYH9chr1593444529chr22367011481130HLA-B73:01SRYEILTPNSI0.99340.60151223
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:33SLHSNASRY0.99930.8692615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:34SLHSNASRY0.99930.8692615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:27SLHSNASRY0.99930.834615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:125SLHSNASRY0.99930.8692615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:50SLHSNASRY0.99920.8868615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:135SLHSNASRY0.99920.875615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:12SLHSNASRY0.99860.8676615
CHD2-MYH9chr1593444529chr22367011481130HLA-C15:02HSNASRYEI0.99850.8659817
CHD2-MYH9chr1593444529chr22367011481130HLA-C15:05HSNASRYEI0.99850.9111817
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:11SLHSNASRY0.99840.8112615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:08SLHSNASRY0.9980.8021615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:35SLHSNASRY0.99690.8481615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:53SLHSNASRY0.99310.845615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:39SLHSNASRY0.99310.7222615
CHD2-MYH9chr1593444529chr22367011481130HLA-A74:01SSLHSNASR0.97430.5768514
CHD2-MYH9chr1593444529chr22367011481130HLA-C16:02HSNASRYEI0.96480.9916817
CHD2-MYH9chr1593444529chr22367011481130HLA-C16:01HSNASRYEI0.85330.9706817
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:20SLHSNASRY0.8050.8475615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:54SLHSNASRY0.74490.8231615
CHD2-MYH9chr1593444529chr22367011481130HLA-B35:28SLHSNASRY0.70050.8396615
CHD2-MYH9chr1593444529chr22367011481130HLA-B35:20SLHSNASRY0.65980.8505615
CHD2-MYH9chr1593444529chr22367011481130HLA-B15:68SLHSNASRY0.36430.5032615
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:09SRYEILTPNSI0.99990.93661223
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:06SRYEILTPNSI0.99990.85351223
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:10SRYEILTPNSI0.99990.9311223
CHD2-MYH9chr1593444529chr22367011481130HLA-B27:08SRYEILTPNSI0.99990.8961223
CHD2-MYH9chr1593444529chr22367011481130HLA-B38:05LHSNASRYEIL0.99660.9454718
CHD2-MYH9chr1593444529chr22367011481130HLA-C06:08SRYEILTPNSI0.99530.99321223
CHD2-MYH9chr1593444529chr22367011481130HLA-C06:17SRYEILTPNSI0.87340.99441223
CHD2-MYH9chr1593444529chr22367011481130HLA-C06:02SRYEILTPNSI0.87340.99441223

Top

Potential FusionNeoAntigen Information of CHD2-MYH9 in HLA II

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
CHD2-MYH9_93444529_36701148.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCIIpan v4.1 (%rank<0.5).
Fusion geneHchrHbpTgeneTchrTbpHLA IIFusionNeoAntigen peptideNeoantigen start (at BP 13)Neoantigen end (at BP 13)
CHD2-MYH9chr1593444529chr22367011481130DRB1-0101ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0101NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0101SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0102ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0102NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0103ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0103NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0103SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0105ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0105NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0105SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0107ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0107NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0107SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0109ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0109NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0109SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0111ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0111NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0111SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0113ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0113NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0113SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0115ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0115NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0115SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0117ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0117NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0117SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0119ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0119NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0119SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0121ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0121NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0121SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0123ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0123NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0125ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0125NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0125SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0127ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0127NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0127SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0129ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0129NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0129SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0131ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0131NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0131SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0424ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0424NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0434ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0447ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0447NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0454ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0462ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0462NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0464ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0469ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0469NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0469SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0482ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0482NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0482SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0701ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0701NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0701SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0703ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0703NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0703SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0704ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0704NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0704SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0705ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0705NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0705SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0706ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0706NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0706SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0707ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0707NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0707SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0708ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0708NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0708SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0709ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0709NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0709SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0711ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0711NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0711SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0712ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0712NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0712SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0713ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0713NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0713SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0714ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0714NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0714SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0715ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0715NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0715SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0716ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0716NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0716SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0717ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0717NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0717SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0719ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0719NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0719SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0803ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0807ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0807NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0807SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0808ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0808NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0811ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0811NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0813ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0814ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0815ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0819ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0819NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0819SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0823ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0825ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0825NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0825SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0827ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0830ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0832ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0832NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0832SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0833ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0834ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0834NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0834SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0835ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0836ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0837ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0837NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0838ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0902ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0903ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0903NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0904ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0905ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0905NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-0905SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-0907ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0908ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-0908NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1001ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1001NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1001SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1003ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1003NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1003SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1130ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1130NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1172ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1216ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1216NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1216SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1222ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1222NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1222SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-13100ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-13100NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-13100SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1331ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1331NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1346ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1346NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1346SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1367ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1386ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1386NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1402ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1402NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1409ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1413ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1413NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1430ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1441ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1441NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1446ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1446NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1446SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1447ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1448ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1448NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1448SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1449ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1449NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1449SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1451ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1468ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1468NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1469ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1469NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1485ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1489ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1489NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1493ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1493NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1494ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1494NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1502ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1502NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1508ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1508NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1511ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1511NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1514ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1514NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1515ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1515NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1519ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1519NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1526ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1526NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1527ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1527NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1527SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1529ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1529NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1529SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1530ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1530NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1531ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1531NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1534ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1534NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1534SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1538ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1538NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1539ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1539NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1544ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1544NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1547ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1547NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1601ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1601NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1601SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1602ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1602NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1602SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1603ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1603NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1603SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1604ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1604NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1604SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1605ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1605NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1605SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1607ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1607NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1607SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1608ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1608NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1608SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1609ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1609NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1609SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1610ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1610NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1610SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1611ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1611NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1611SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1612ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1612NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1612SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1614ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1614NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1614SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB1-1615ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1616ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB1-1616NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB1-1616SNASRYEILTPNSIP924
CHD2-MYH9chr1593444529chr22367011481130DRB3-0109ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0109NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB3-0209ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0209NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB3-0213ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0213NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB3-0215ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0216ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0216NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB3-0217ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0217NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB3-0221ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB3-0221NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB3-0303ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB5-0102ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB5-0102NASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB5-0103ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB5-0104ASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB5-0108NASRYEILTPNSIPKG1126
CHD2-MYH9chr1593444529chr22367011481130DRB5-0108NNASRYEILTPNSIPK1025
CHD2-MYH9chr1593444529chr22367011481130DRB5-0112ASRYEILTPNSIPKG1126

Top

Fusion breakpoint peptide structures of CHD2-MYH9

check button3D structures of the fusion breakpoint peptide of 14AA sequence that have potential fusion neoantigens
* The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA.
File nameBPseqHgeneTgeneHchrHbpTchrTbpAAlen
8749SLHSNASRYEILTPCHD2MYH9chr1593444529chr22367011481130

Top

Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of CHD2-MYH9

check buttonVirtual screening between 25 HLAs (from PDB) and FusionNeoAntigens
* We used Glide to predict the interaction between HLAs and neoantigens.
HLA allelePDB IDFile nameBPseqDocking scoreGlide score
HLA-B14:023BVN8749SLHSNASRYEILTP-6.9015-7.0162
HLA-B14:023BVN8749SLHSNASRYEILTP-6.88733-7.92393
HLA-B52:013W398749SLHSNASRYEILTP-6.20276-6.31746
HLA-B52:013W398749SLHSNASRYEILTP-3.23728-4.27388
HLA-A24:025HGA8749SLHSNASRYEILTP-6.25402-7.29062
HLA-A24:025HGA8749SLHSNASRYEILTP-5.4385-5.5532
HLA-B44:053DX88749SLHSNASRYEILTP-6.77944-6.89414
HLA-B44:053DX88749SLHSNASRYEILTP-5.78397-6.82057
HLA-A02:016TDR8749SLHSNASRYEILTP-2.00985-3.04645

Top

Vaccine Design for the FusionNeoAntigens of CHD2-MYH9

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-Is.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptide sequenceFusionNeoAntigen RNA sequence
CHD2-MYH9chr1593444529chr22367011481220SRYEILTPGAGATATGAGATCCTGACTCCAAA
CHD2-MYH9chr1593444529chr22367011481222SRYEILTPNSGAGATATGAGATCCTGACTCCAAACTCCAT
CHD2-MYH9chr1593444529chr22367011481223SRYEILTPNSIGAGATATGAGATCCTGACTCCAAACTCCATTCC
CHD2-MYH9chr1593444529chr2236701148514SSLHSNASRTTCGCTACACAGCAATGCATCGAGATA
CHD2-MYH9chr1593444529chr2236701148615SLHSNASRYGCTACACAGCAATGCATCGAGATATGA
CHD2-MYH9chr1593444529chr2236701148715LHSNASRYACACAGCAATGCATCGAGATATGA
CHD2-MYH9chr1593444529chr2236701148718LHSNASRYEILACACAGCAATGCATCGAGATATGAGATCCTGAC
CHD2-MYH9chr1593444529chr2236701148817HSNASRYEICAGCAATGCATCGAGATATGAGATCCT
CHD2-MYH9chr1593444529chr2236701148918SNASRYEILCAATGCATCGAGATATGAGATCCTGAC

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-IIs.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptideFusionNEoAntigen RNA sequence
CHD2-MYH9chr1593444529chr22367011481025NASRYEILTPNSIPKTGCATCGAGATATGAGATCCTGACTCCAAACTCCATTCCCAAGGG
CHD2-MYH9chr1593444529chr22367011481126ASRYEILTPNSIPKGATCGAGATATGAGATCCTGACTCCAAACTCCATTCCCAAGGGTTT
CHD2-MYH9chr1593444529chr2236701148924SNASRYEILTPNSIPCAATGCATCGAGATATGAGATCCTGACTCCAAACTCCATTCCCAA

Top

Information of the samples that have these potential fusion neoantigens of CHD2-MYH9

check button These samples were reported as having these fusion breakpoints. For individual breakpoints, we checked the open reading frames considering multiple gene isoforms and chose the in-frame fusion genes only. Then, we made fusion protein sequences and predicted the fusion neoantigens. These fusion-positive samples may have these potential fusion neoantigens.
Cancer typeFusion geneHchrHbpHenstTchrTbpTenstSample
OVCHD2-MYH9chr1593444529ENST00000394196chr2236701148ENST00000216181TCGA-29-1688

Top

Potential target of CAR-T therapy development for CHD2-MYH9

check button Predicted 3D structure. We used RoseTTAFold.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, to provide the retention of the transmembrane domain, we only show the protein feature retention information of those transmembrane features


* Minus value of BPloci means that the break point is located before the CDS.
- In-frame and retained 'Transmembrane'.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

check button Subcellular localization prediction of the transmembrane domain retained fusion proteins
* We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image.
HgeneHchrHbpHenstTgeneTchrTbpTenstDeepLoc result

Top

Related Drugs to CHD2-MYH9

check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

Top

Related Diseases to CHD2-MYH9

check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource