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Fusion Protein:NOM1-MXI1 |
Fusion Gene and Fusion Protein Summary |
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Fusion partner gene information | Fusion gene name: NOM1-MXI1 | FusionPDB ID: 59587 | FusionGDB2.0 ID: 59587 | Hgene | Tgene | Gene symbol | NOM1 | MXI1 | Gene ID | 64434 | 4601 |
Gene name | nucleolar protein with MIF4G domain 1 | MAX interactor 1, dimerization protein | |
Synonyms | C7orf3|PPP1R113|SGD1 | MAD2|MXD2|MXI|bHLHc11 | |
Cytomap | 7q36.3 | 10q25.2 | |
Type of gene | protein-coding | protein-coding | |
Description | nucleolar MIF4G domain-containing protein 1SGD1 homologprotein phosphatase 1, regulatory subunit 113 | max-interacting protein 1MAX dimerization protein 2Max-related transcription factorclass C basic helix-loop-helix protein 11 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q5C9Z4 Main function of 5'-partner protein: FUNCTION: Plays a role in targeting PPP1CA to the nucleolus. {ECO:0000269|PubMed:17965019}. | P50539 Main function of 5'-partner protein: FUNCTION: Transcriptional repressor. MXI1 binds with MAX to form a sequence-specific DNA-binding protein complex which recognizes the core sequence 5'-CAC[GA]TG-3'. MXI1 thus antagonizes MYC transcriptional activity by competing for MAX. | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000460332, ENST00000275820, | ENST00000239007, ENST00000332674, ENST00000361248, ENST00000393134, ENST00000369612, ENST00000485566, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 5 X 4 X 4=80 | 17 X 10 X 9=1530 |
# samples | 6 | 19 | |
** MAII score | log2(6/80*10)=-0.415037499278844 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(19/1530*10)=-3.00946032924907 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Fusion gene context | PubMed: NOM1 [Title/Abstract] AND MXI1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Fusion neoantigen context | PubMed: NOM1 [Title/Abstract] AND MXI1 [Title/Abstract] AND neoantigen [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | NOM1(156746992)-MXI1(112044581), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | NOM1-MXI1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. NOM1-MXI1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. NOM1-MXI1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. NOM1-MXI1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. NOM1-MXI1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. NOM1-MXI1 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. NOM1-MXI1 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | MXI1 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 11875718 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr7:156746992/chr10:112044581) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Amino Acid Sequences |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000275820 | NOM1 | chr7 | 156746992 | + | ENST00000393134 | MXI1 | chr10 | 112044581 | + | 1592 | 1323 | 15 | 1382 | 455 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000275820 | ENST00000393134 | NOM1 | chr7 | 156746992 | + | MXI1 | chr10 | 112044581 | + | 0.003710132 | 0.99628985 |
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Get the fusion protein sequences from here. |
Fusion protein sequence information is available in the fasta format. >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP |
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Fusion Protein Breakpoint Sequences for NOM1-MXI1 |
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Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Length(fusion protein) | BP in fusion protein | Peptide |
NOM1 | chr7 | 156746992 | MXI1 | chr10 | 112044581 | 1323 | 436 | LLVSILHHTVGIERRLKWMLKAQSSP |
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Potential FusionNeoAntigen Information of NOM1-MXI1 in HLA I |
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NOM1-MXI1_156746992_112044581.msa |
![]() * We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5) |
Fusion gene | Hchr | Hbp | Tgene | Tchr | Tbp | HLA I | FusionNeoAntigen peptide | Binding score | Immunogenic score | Neoantigen start (at BP 13) | Neoantigen end (at BP 13) |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B14:02 | ERRLKWML | 0.9966 | 0.6267 | 12 | 20 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B14:01 | ERRLKWML | 0.9966 | 0.6267 | 12 | 20 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:01 | VGIERRLKW | 0.9991 | 0.9456 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:02 | VGIERRLKW | 0.9983 | 0.8882 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:01 | VGIERRLKW | 0.9964 | 0.8833 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:03 | VGIERRLKW | 0.9843 | 0.9663 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A32:13 | VGIERRLKW | 0.7247 | 0.9424 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:01 | TVGIERRLKW | 0.9995 | 0.9534 | 8 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B39:01 | HHTVGIERRL | 0.9931 | 0.7905 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B38:01 | HHTVGIERRL | 0.9782 | 0.8725 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B38:02 | HHTVGIERRL | 0.9748 | 0.8747 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B15:10 | HHTVGIERRL | 0.9122 | 0.6391 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B15:37 | HHTVGIERRL | 0.6097 | 0.645 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:01 | HTVGIERRLKW | 1 | 0.9784 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:02 | HTVGIERRLKW | 0.9999 | 0.9331 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:01 | HTVGIERRLKW | 0.9994 | 0.9507 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B15:17 | HTVGIERRLKW | 0.9982 | 0.9373 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:03 | HTVGIERRLKW | 0.9969 | 0.9846 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A32:13 | HTVGIERRLKW | 0.9877 | 0.9475 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C15:04 | HTVGIERRL | 0.9977 | 0.9584 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C03:08 | HTVGIERRL | 0.9971 | 0.9449 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C15:06 | HTVGIERRL | 0.9966 | 0.9638 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C03:07 | HTVGIERRL | 0.9938 | 0.9905 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C12:04 | HTVGIERRL | 0.525 | 0.9935 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C06:03 | HTVGIERRL | 0.5208 | 0.9929 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C12:12 | HTVGIERRL | 0.4126 | 0.929 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C02:06 | HTVGIERRL | 0.1338 | 0.9833 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B39:05 | HHTVGIERRL | 0.9767 | 0.7834 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:10 | VGIERRLKW | 0.9991 | 0.9456 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C15:09 | HTVGIERRL | 0.9977 | 0.9584 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:06 | VGIERRLKW | 0.9955 | 0.7976 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:04 | VGIERRLKW | 0.994 | 0.8165 | 9 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C15:05 | HTVGIERRL | 0.9937 | 0.9025 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C15:02 | HTVGIERRL | 0.9913 | 0.9454 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C03:17 | HTVGIERRL | 0.9861 | 0.9826 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A68:02 | HTVGIERRL | 0.9771 | 0.5833 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A69:01 | HTVGIERRL | 0.9414 | 0.7342 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C16:04 | HTVGIERRL | 0.8604 | 0.978 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C16:02 | HTVGIERRL | 0.7852 | 0.9951 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C12:03 | HTVGIERRL | 0.4423 | 0.9797 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C06:08 | HTVGIERRL | 0.227 | 0.9884 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C02:10 | HTVGIERRL | 0.106 | 0.9885 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-C02:02 | HTVGIERRL | 0.106 | 0.9885 | 7 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:10 | TVGIERRLKW | 0.9995 | 0.9534 | 8 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:06 | TVGIERRLKW | 0.9944 | 0.8725 | 8 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B38:05 | HHTVGIERRL | 0.9782 | 0.8725 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B15:09 | HHTVGIERRL | 0.8665 | 0.7255 | 6 | 16 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A25:01 | TVGIERRLKW | 0.3807 | 0.9299 | 8 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:10 | HTVGIERRLKW | 1 | 0.9784 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:04 | HTVGIERRLKW | 0.9999 | 0.8552 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B58:06 | HTVGIERRLKW | 0.9998 | 0.8889 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-B57:02 | HTVGIERRLKW | 0.9989 | 0.9591 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A32:01 | HTVGIERRLKW | 0.9943 | 0.9615 | 7 | 18 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | HLA-A25:01 | HTVGIERRLKW | 0.9118 | 0.9269 | 7 | 18 |
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Potential FusionNeoAntigen Information of NOM1-MXI1 in HLA II |
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NOM1-MXI1_156746992_112044581.msa |
![]() * We used NetMHCIIpan v4.1 (%rank<0.5). |
Fusion gene | Hchr | Hbp | Tgene | Tchr | Tbp | HLA II | FusionNeoAntigen peptide | Neoantigen start (at BP 13) | Neoantigen end (at BP 13) |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-0828 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-0831 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1104 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1106 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1135 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1138 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1143 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1144 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1146 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1147 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1150 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1156 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1158 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1160 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1167 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1177 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1178 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1183 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1184 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1188 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1192 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1311 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1342 | IERRLKWMLKAQSSP | 11 | 26 |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 | DRB1-1412 | IERRLKWMLKAQSSP | 11 | 26 |
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Fusion breakpoint peptide structures of NOM1-MXI1 |
![]() * The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA. |
File name | BPseq | Hgene | Tgene | Hchr | Hbp | Tchr | Tbp | AAlen |
3357 | HHTVGIERRLKWML | NOM1 | MXI1 | chr7 | 156746992 | chr10 | 112044581 | 1323 |
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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of NOM1-MXI1 |
![]() * We used Glide to predict the interaction between HLAs and neoantigens. |
HLA allele | PDB ID | File name | BPseq | Docking score | Glide score |
HLA-B14:02 | 3BVN | 3357 | HHTVGIERRLKWML | -7.15543 | -7.26883 |
HLA-B14:02 | 3BVN | 3357 | HHTVGIERRLKWML | -4.77435 | -5.80965 |
HLA-B52:01 | 3W39 | 3357 | HHTVGIERRLKWML | -6.80875 | -6.92215 |
HLA-B52:01 | 3W39 | 3357 | HHTVGIERRLKWML | -4.20386 | -5.23916 |
HLA-A11:01 | 4UQ2 | 3357 | HHTVGIERRLKWML | -7.5194 | -8.5547 |
HLA-A11:01 | 4UQ2 | 3357 | HHTVGIERRLKWML | -6.9601 | -7.0735 |
HLA-A24:02 | 5HGA | 3357 | HHTVGIERRLKWML | -7.52403 | -7.63743 |
HLA-A24:02 | 5HGA | 3357 | HHTVGIERRLKWML | -5.82433 | -6.85963 |
HLA-B27:05 | 6PYJ | 3357 | HHTVGIERRLKWML | -3.28285 | -4.31815 |
HLA-B44:05 | 3DX8 | 3357 | HHTVGIERRLKWML | -5.91172 | -6.94702 |
HLA-B44:05 | 3DX8 | 3357 | HHTVGIERRLKWML | -4.24346 | -4.35686 |
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Vaccine Design for the FusionNeoAntigens of NOM1-MXI1 |
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Fusion gene | Hchr | Hbp | Tchr | Tbp | Start in +/-13AA | End in +/-13AA | FusionNeoAntigen peptide sequence | FusionNeoAntigen RNA sequence |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 12 | 20 | ERRLKWML | GAGAGGAGATTGAAGTGGATGTTG |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 6 | 16 | HHTVGIERRL | CACCACACAGTTGGAATCGAGAGGAGATTG |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 7 | 16 | HTVGIERRL | CACACAGTTGGAATCGAGAGGAGATTG |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 7 | 18 | HTVGIERRLKW | CACACAGTTGGAATCGAGAGGAGATTGAAGTGG |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 8 | 18 | TVGIERRLKW | ACAGTTGGAATCGAGAGGAGATTGAAGTGG |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 9 | 18 | VGIERRLKW | GTTGGAATCGAGAGGAGATTGAAGTGG |
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Fusion gene | Hchr | Hbp | Tchr | Tbp | Start in +/-13AA | End in +/-13AA | FusionNeoAntigen peptide | FusionNEoAntigen RNA sequence |
NOM1-MXI1 | chr7 | 156746992 | chr10 | 112044581 | 11 | 26 | IERRLKWMLKAQSSP | ATCGAGAGGAGATTGAAGTGGATGTTGAAAGCACAGAGTTCTCCC |
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Information of the samples that have these potential fusion neoantigens of NOM1-MXI1 |
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Cancer type | Fusion gene | Hchr | Hbp | Henst | Tchr | Tbp | Tenst | Sample |
BRCA | NOM1-MXI1 | chr7 | 156746992 | ENST00000275820 | chr10 | 112044581 | ENST00000393134 | TCGA-BH-A0AW |
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Potential target of CAR-T therapy development for NOM1-MXI1 |
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![]() * Minus value of BPloci means that the break point is located before the CDS. |
- In-frame and retained 'Transmembrane'. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
![]() * We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image. |
Hgene | Hchr | Hbp | Henst | Tgene | Tchr | Tbp | Tenst | DeepLoc result |
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Related Drugs to NOM1-MXI1 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to NOM1-MXI1 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |