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Fusion Protein:NOMO1-ABCC1 |
Fusion Gene and Fusion Protein Summary |
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Fusion partner gene information | Fusion gene name: NOMO1-ABCC1 | FusionPDB ID: 59591 | FusionGDB2.0 ID: 59591 | Hgene | Tgene | Gene symbol | NOMO1 | ABCC1 | Gene ID | 23420 | 4363 |
Gene name | NODAL modulator 1 | ATP binding cassette subfamily C member 1 | |
Synonyms | Nomo|PM5 | ABC29|ABCC|GS-X|MRP|MRP1 | |
Cytomap | 16p13.11 | 16p13.11 | |
Type of gene | protein-coding | protein-coding | |
Description | nodal modulator 1nodal modulator 3pM5 protein 3pM5 protein, telomeric copy | multidrug resistance-associated protein 1ATP-binding cassette transporter variant ABCC1delta-ex13ATP-binding cassette transporter variant ABCC1delta-ex13&14ATP-binding cassette transporter variant ABCC1delta-ex25ATP-binding cassette transporter varian | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q15155 Main function of 5'-partner protein: FUNCTION: Component of a ribosome-associated endoplasmic reticulum (ER) translocon complex involved in multi-pass membrane protein transport into the ER membrane and biogenesis (PubMed:32820719). May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning, via its interaction with NCLN/Nicalin (By similarity). {ECO:0000250|UniProtKB:Q6NZ07, ECO:0000269|PubMed:32820719}. | Q96J66 Main function of 5'-partner protein: FUNCTION: ATP-dependent transporter of the ATP-binding cassette (ABC) family that actively extrudes physiological compounds, and xenobiotics from cells. Participates in physiological processes involving bile acids, conjugated steroids and cyclic nucleotides (PubMed:12764137, PubMed:15537867). Stimulates the ATP-dependent uptake of a range of physiological lipophilic anions, including the glutathione S-conjugates leukotriene C4 and dinitrophenyl S-glutathione, steroid sulfates such as dehydroepiandrosterone 3-sulfate (DHEAS) and estrone 3-sulfate, glucuronides such as estradiol 17-beta-D-glucuronide (E(2)17betaG), the monoanionic bile acids glycocholate and taurocholate, and methotrexate (PubMed:15537867, PubMed:25896536). Enhances also the cellular extrusion of cAMP and cGMP (PubMed:12764137, PubMed:15537867). Confers resistance to anticancer drugs, such as 5-fluorouracil (5-FU) and methotrexate (PubMed:25896536, PubMed:15537867, PubMed:12764137). Probably functions to secrete earwax (PubMed:16444273, PubMed:19383836). Required for the secretion of components contributing to axillary odor formation (PubMed:19710689, PubMed:12764137, PubMed:15537867, PubMed:16444273, PubMed:19383836, PubMed:25896536). {ECO:0000269|PubMed:12764137, ECO:0000269|PubMed:15537867, ECO:0000269|PubMed:16444273, ECO:0000269|PubMed:19383836, ECO:0000269|PubMed:19710689, ECO:0000269|PubMed:25896536}. | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000287667, ENST00000566883, | ENST00000576557, ENST00000345148, ENST00000346370, ENST00000349029, ENST00000351154, ENST00000399408, ENST00000399410, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 7 X 6 X 5=210 | 16 X 13 X 5=1040 |
# samples | 7 | 16 | |
** MAII score | log2(7/210*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/1040*10)=-2.70043971814109 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Fusion gene context | PubMed: NOMO1 [Title/Abstract] AND ABCC1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Fusion neoantigen context | PubMed: NOMO1 [Title/Abstract] AND ABCC1 [Title/Abstract] AND neoantigen [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | NOMO1(14966186)-ABCC1(16138307), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | NOMO1-ABCC1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. NOMO1-ABCC1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr16:14966186/chr16:16138307) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Amino Acid Sequences |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000287667 | NOMO1 | chr16 | 14966186 | + | ENST00000399410 | ABCC1 | chr16 | 16138307 | + | 7793 | 2225 | 135 | 6011 | 1958 |
ENST00000287667 | NOMO1 | chr16 | 14966186 | + | ENST00000349029 | ABCC1 | chr16 | 16138307 | + | 7460 | 2225 | 135 | 5666 | 1843 |
ENST00000287667 | NOMO1 | chr16 | 14966186 | + | ENST00000351154 | ABCC1 | chr16 | 16138307 | + | 7628 | 2225 | 135 | 5834 | 1899 |
ENST00000287667 | NOMO1 | chr16 | 14966186 | + | ENST00000399408 | ABCC1 | chr16 | 16138307 | + | 7835 | 2225 | 135 | 6041 | 1968 |
ENST00000287667 | NOMO1 | chr16 | 14966186 | + | ENST00000345148 | ABCC1 | chr16 | 16138307 | + | 7610 | 2225 | 135 | 5816 | 1893 |
ENST00000287667 | NOMO1 | chr16 | 14966186 | + | ENST00000346370 | ABCC1 | chr16 | 16138307 | + | 7637 | 2225 | 135 | 5843 | 1902 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000287667 | ENST00000399410 | NOMO1 | chr16 | 14966186 | + | ABCC1 | chr16 | 16138307 | + | 0.000769511 | 0.9992305 |
ENST00000287667 | ENST00000349029 | NOMO1 | chr16 | 14966186 | + | ABCC1 | chr16 | 16138307 | + | 0.001123795 | 0.99887615 |
ENST00000287667 | ENST00000351154 | NOMO1 | chr16 | 14966186 | + | ABCC1 | chr16 | 16138307 | + | 0.001133237 | 0.9988668 |
ENST00000287667 | ENST00000399408 | NOMO1 | chr16 | 14966186 | + | ABCC1 | chr16 | 16138307 | + | 0.000509823 | 0.99949014 |
ENST00000287667 | ENST00000345148 | NOMO1 | chr16 | 14966186 | + | ABCC1 | chr16 | 16138307 | + | 0.000824573 | 0.99917537 |
ENST00000287667 | ENST00000346370 | NOMO1 | chr16 | 14966186 | + | ABCC1 | chr16 | 16138307 | + | 0.001029454 | 0.9989705 |
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Get the fusion protein sequences from here. |
Fusion protein sequence information is available in the fasta format. >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP |
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Fusion Protein Breakpoint Sequences for NOMO1-ABCC1 |
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Hgene | Hchr | Hbp | Tgene | Tchr | Tbp | Length(fusion protein) | BP in fusion protein | Peptide |
NOMO1 | chr16 | 14966186 | ABCC1 | chr16 | 16138307 | 2225 | 697 | TTDKMMDVTVTIKQPVKVVYSSKDPA |
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Potential FusionNeoAntigen Information of NOMO1-ABCC1 in HLA I |
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NOMO1-ABCC1_14966186_16138307.msa |
![]() * We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5) |
Fusion gene | Hchr | Hbp | Tgene | Tchr | Tbp | HLA I | FusionNeoAntigen peptide | Binding score | Immunogenic score | Neoantigen start (at BP 13) | Neoantigen end (at BP 13) |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:01 | KQPVKVVY | 0.9997 | 0.8375 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:25 | KQPVKVVY | 0.9927 | 0.8747 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:03 | KQPVKVVY | 0.8903 | 0.7282 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:16 | VTIKQPVKV | 0.9805 | 0.9195 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A30:08 | VTIKQPVKV | 0.9712 | 0.803 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B08:09 | TIKQPVKVV | 0.9384 | 0.7448 | 10 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A02:21 | VTIKQPVKV | 0.8817 | 0.6254 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A02:20 | VTIKQPVKV | 0.8276 | 0.5216 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B13:02 | VTIKQPVKV | 0.7708 | 0.8827 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B52:01 | VTIKQPVKV | 0.6741 | 0.9932 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:03 | IKQPVKVVY | 0.4637 | 0.5595 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:18 | IKQPVKVVY | 0.4392 | 0.5252 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:01 | IKQPVKVVY | 0.137 | 0.8521 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:01 | TIKQPVKVVY | 0.9999 | 0.8998 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:25 | TIKQPVKVVY | 0.998 | 0.878 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:02 | TIKQPVKVVY | 0.9972 | 0.8836 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:03 | TIKQPVKVVY | 0.9715 | 0.7176 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B57:01 | VTIKQPVKVVY | 0.9998 | 0.9488 | 9 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:17 | VTIKQPVKVVY | 0.9996 | 0.8882 | 9 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:16 | VTIKQPVKVVY | 0.9967 | 0.8515 | 9 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:07 | KQPVKVVY | 0.9984 | 0.5626 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:04 | KQPVKVVY | 0.9845 | 0.875 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:05 | KQPVKVVY | 0.9307 | 0.8352 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C15:04 | VTIKQPVKV | 0.9995 | 0.9541 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C15:06 | VTIKQPVKV | 0.9995 | 0.9436 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C03:07 | VTIKQPVKV | 0.9986 | 0.9762 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C04:06 | VTIKQPVKV | 0.9961 | 0.9769 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:95 | IKQPVKVVY | 0.9767 | 0.5178 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:27 | IKQPVKVVY | 0.9762 | 0.8836 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C06:03 | VTIKQPVKV | 0.9332 | 0.9944 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C12:04 | VTIKQPVKV | 0.9324 | 0.9958 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:19 | IKQPVKVVY | 0.9228 | 0.5302 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:05 | IKQPVKVVY | 0.8983 | 0.9239 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:80 | IKQPVKVVY | 0.882 | 0.8725 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:67 | IKQPVKVVY | 0.882 | 0.8725 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:10 | IKQPVKVVY | 0.8626 | 0.8813 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:46 | IKQPVKVVY | 0.8599 | 0.7718 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C12:12 | VTIKQPVKV | 0.7542 | 0.9362 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C02:06 | VTIKQPVKV | 0.7187 | 0.957 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:21 | IKQPVKVVY | 0.5906 | 0.7649 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:07 | IKQPVKVVY | 0.5504 | 0.5319 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C12:16 | IKQPVKVVY | 0.1101 | 0.9352 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:07 | TIKQPVKVVY | 0.9998 | 0.6833 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:04 | TIKQPVKVVY | 0.9922 | 0.9356 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:05 | TIKQPVKVVY | 0.9363 | 0.8591 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:31 | TIKQPVKVVY | 0.9063 | 0.8657 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:135 | KQPVKVVY | 0.9997 | 0.8601 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:27 | KQPVKVVY | 0.9997 | 0.8398 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:34 | KQPVKVVY | 0.9997 | 0.8375 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:125 | KQPVKVVY | 0.9997 | 0.8375 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:33 | KQPVKVVY | 0.9997 | 0.8375 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:50 | KQPVKVVY | 0.9996 | 0.8004 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:12 | KQPVKVVY | 0.998 | 0.7819 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:53 | KQPVKVVY | 0.9978 | 0.7976 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:35 | KQPVKVVY | 0.9975 | 0.8012 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:54 | KQPVKVVY | 0.9953 | 0.7793 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:39 | KQPVKVVY | 0.993 | 0.7881 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:68 | KQPVKVVY | 0.9775 | 0.5072 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:20 | KQPVKVVY | 0.9358 | 0.8852 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B35:28 | KQPVKVVY | 0.9115 | 0.8894 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B48:02 | KQPVKVVY | 0.6968 | 0.8723 | 12 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C15:02 | VTIKQPVKV | 0.9998 | 0.9211 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C15:05 | VTIKQPVKV | 0.9996 | 0.9404 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C15:09 | VTIKQPVKV | 0.9995 | 0.9541 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C16:02 | VTIKQPVKV | 0.9928 | 0.9955 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A69:01 | VTIKQPVKV | 0.9474 | 0.7164 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C16:04 | VTIKQPVKV | 0.897 | 0.9811 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A02:14 | VTIKQPVKV | 0.8832 | 0.5353 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:02 | IKQPVKVVY | 0.882 | 0.8725 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A02:06 | VTIKQPVKV | 0.8817 | 0.6254 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:17 | IKQPVKVVY | 0.8496 | 0.9175 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C07:22 | IKQPVKVVY | 0.8318 | 0.6587 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C17:01 | VTIKQPVKV | 0.8179 | 0.9835 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C06:08 | VTIKQPVKV | 0.7687 | 0.9901 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C12:03 | VTIKQPVKV | 0.7404 | 0.9833 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:12 | IKQPVKVVY | 0.7228 | 0.7737 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C02:10 | VTIKQPVKV | 0.6218 | 0.9779 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C02:02 | VTIKQPVKV | 0.6218 | 0.9779 | 9 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:50 | IKQPVKVVY | 0.5913 | 0.8577 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:35 | IKQPVKVVY | 0.5533 | 0.7721 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B35:20 | IKQPVKVVY | 0.4397 | 0.8332 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B35:28 | IKQPVKVVY | 0.4231 | 0.8217 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:11 | IKQPVKVVY | 0.3691 | 0.7954 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B48:02 | IKQPVKVVY | 0.32 | 0.807 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:04 | IKQPVKVVY | 0.3019 | 0.8708 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:53 | IKQPVKVVY | 0.2645 | 0.7481 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:54 | IKQPVKVVY | 0.17 | 0.731 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:07 | IKQPVKVVY | 0.1673 | 0.7847 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:03 | IKQPVKVVY | 0.143 | 0.84 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:05 | IKQPVKVVY | 0.137 | 0.8521 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:06 | IKQPVKVVY | 0.1364 | 0.8445 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B18:08 | IKQPVKVVY | 0.116 | 0.7171 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-C12:02 | IKQPVKVVY | 0.033 | 0.9387 | 11 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:125 | TIKQPVKVVY | 0.9999 | 0.8998 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:27 | TIKQPVKVVY | 0.9999 | 0.9014 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:33 | TIKQPVKVVY | 0.9999 | 0.8998 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:135 | TIKQPVKVVY | 0.9999 | 0.9128 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:34 | TIKQPVKVVY | 0.9999 | 0.8998 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:35 | TIKQPVKVVY | 0.9998 | 0.8943 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:11 | TIKQPVKVVY | 0.9998 | 0.8681 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:08 | TIKQPVKVVY | 0.9998 | 0.8535 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:53 | TIKQPVKVVY | 0.9998 | 0.8791 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:50 | TIKQPVKVVY | 0.9998 | 0.8941 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:54 | TIKQPVKVVY | 0.9985 | 0.8657 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:39 | TIKQPVKVVY | 0.998 | 0.7909 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:12 | TIKQPVKVVY | 0.9975 | 0.8669 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:68 | TIKQPVKVVY | 0.9924 | 0.6216 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B15:20 | TIKQPVKVVY | 0.9405 | 0.8948 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B48:02 | TIKQPVKVVY | 0.8074 | 0.8898 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A25:01 | TIKQPVKVVY | 0.7105 | 0.7947 | 10 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B57:10 | VTIKQPVKVVY | 0.9998 | 0.9488 | 9 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-B57:04 | VTIKQPVKVVY | 0.9997 | 0.6286 | 9 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | HLA-A30:01 | KQPVKVVYSSK | 0.9922 | 0.7767 | 12 | 23 |
Top |
Potential FusionNeoAntigen Information of NOMO1-ABCC1 in HLA II |
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NOMO1-ABCC1_14966186_16138307.msa |
![]() * We used NetMHCIIpan v4.1 (%rank<0.5). |
Fusion gene | Hchr | Hbp | Tgene | Tchr | Tbp | HLA II | FusionNeoAntigen peptide | Neoantigen start (at BP 13) | Neoantigen end (at BP 13) |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0403 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0405 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0405 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0409 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0411 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0411 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0417 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0417 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0424 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0427 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0429 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0429 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0430 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0430 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0439 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0441 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0445 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0445 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0446 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0448 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0448 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0449 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0450 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0451 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0452 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0457 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0457 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0459 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0460 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0465 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0467 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0467 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0471 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0477 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0477 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0478 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0480 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0483 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0483 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0484 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0484 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0485 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0486 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0487 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0488 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0489 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0489 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0491 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0491 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-0812 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1113 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1113 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1117 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1117 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1117 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1152 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1152 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1152 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1189 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1189 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1377 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1377 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1401 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1401 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1401 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1401 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1404 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1404 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1404 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1404 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1405 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1405 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1405 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1407 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1407 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1408 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1408 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1408 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1410 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1410 | TIKQPVKVVYSSKDP | 10 | 25 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1411 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1411 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1411 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1418 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1418 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1418 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1418 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1423 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1423 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1423 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1426 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1426 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1426 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1426 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1428 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1428 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1428 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1428 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1431 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1431 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1431 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1432 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1432 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1432 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1434 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1434 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1435 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1435 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1435 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1435 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1438 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1438 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1438 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1438 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1439 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1439 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1439 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1443 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1443 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1443 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1445 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1445 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1445 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1450 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1450 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1450 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1450 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1454 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1454 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1454 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1454 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1455 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1455 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1455 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1455 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1456 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1456 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1456 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1457 | IKQPVKVVYSSKDPA | 11 | 26 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1458 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1458 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1458 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1458 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1459 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1459 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1459 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1460 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1460 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1460 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1460 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1461 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1461 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1461 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1461 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1462 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1462 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1462 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1462 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1464 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1464 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1464 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1465 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1465 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1468 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1468 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1470 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1470 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1470 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1470 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1471 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1471 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1471 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1471 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1472 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1472 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1472 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1475 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1475 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1475 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1475 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1481 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1481 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1482 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1482 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1482 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1486 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1486 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1486 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1486 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1487 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1487 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1487 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1487 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1488 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1488 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1488 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1488 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1490 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1490 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1490 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1490 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1491 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1491 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1491 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1495 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1495 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1496 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1496 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1496 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1497 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1497 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1497 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1497 | MDVTVTIKQPVKVVY | 5 | 20 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1499 | KMMDVTVTIKQPVKV | 3 | 18 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1499 | MMDVTVTIKQPVKVV | 4 | 19 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1499 | DKMMDVTVTIKQPVK | 2 | 17 |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 | DRB1-1499 | MDVTVTIKQPVKVVY | 5 | 20 |
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Fusion breakpoint peptide structures of NOMO1-ABCC1 |
![]() * The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA. |
File name | BPseq | Hgene | Tgene | Hchr | Hbp | Tchr | Tbp | AAlen |
1470 | DVTVTIKQPVKVVY | NOMO1 | ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2225 |
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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of NOMO1-ABCC1 |
![]() * We used Glide to predict the interaction between HLAs and neoantigens. |
HLA allele | PDB ID | File name | BPseq | Docking score | Glide score |
HLA-B14:02 | 3BVN | 1470 | DVTVTIKQPVKVVY | -7.9962 | -8.1096 |
HLA-B14:02 | 3BVN | 1470 | DVTVTIKQPVKVVY | -5.70842 | -6.74372 |
HLA-B52:01 | 3W39 | 1470 | DVTVTIKQPVKVVY | -6.83737 | -6.95077 |
HLA-B52:01 | 3W39 | 1470 | DVTVTIKQPVKVVY | -4.4836 | -5.5189 |
HLA-A11:01 | 4UQ2 | 1470 | DVTVTIKQPVKVVY | -10.0067 | -10.1201 |
HLA-A11:01 | 4UQ2 | 1470 | DVTVTIKQPVKVVY | -9.03915 | -10.0745 |
HLA-A24:02 | 5HGA | 1470 | DVTVTIKQPVKVVY | -6.56204 | -6.67544 |
HLA-A24:02 | 5HGA | 1470 | DVTVTIKQPVKVVY | -5.42271 | -6.45801 |
HLA-B44:05 | 3DX8 | 1470 | DVTVTIKQPVKVVY | -7.85648 | -8.89178 |
HLA-B44:05 | 3DX8 | 1470 | DVTVTIKQPVKVVY | -5.3978 | -5.5112 |
HLA-A02:01 | 6TDR | 1470 | DVTVTIKQPVKVVY | -3.37154 | -4.40684 |
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Vaccine Design for the FusionNeoAntigens of NOMO1-ABCC1 |
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Fusion gene | Hchr | Hbp | Tchr | Tbp | Start in +/-13AA | End in +/-13AA | FusionNeoAntigen peptide sequence | FusionNeoAntigen RNA sequence |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 10 | 19 | TIKQPVKVV | GACTATCAAGCAGCCGGTGAAGGTTGT |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 10 | 20 | TIKQPVKVVY | GACTATCAAGCAGCCGGTGAAGGTTGTGTA |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 11 | 20 | IKQPVKVVY | TATCAAGCAGCCGGTGAAGGTTGTGTA |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 12 | 20 | KQPVKVVY | CAAGCAGCCGGTGAAGGTTGTGTA |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 12 | 23 | KQPVKVVYSSK | CAAGCAGCCGGTGAAGGTTGTGTACTCCTCCAA |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 9 | 18 | VTIKQPVKV | TGTGACTATCAAGCAGCCGGTGAAGGT |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 9 | 20 | VTIKQPVKVVY | TGTGACTATCAAGCAGCCGGTGAAGGTTGTGTA |
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Fusion gene | Hchr | Hbp | Tchr | Tbp | Start in +/-13AA | End in +/-13AA | FusionNeoAntigen peptide | FusionNEoAntigen RNA sequence |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 10 | 25 | TIKQPVKVVYSSKDP | GACTATCAAGCAGCCGGTGAAGGTTGTGTACTCCTCCAAGGATCC |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 11 | 26 | IKQPVKVVYSSKDPA | TATCAAGCAGCCGGTGAAGGTTGTGTACTCCTCCAAGGATCCTGC |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 2 | 17 | DKMMDVTVTIKQPVK | CGACAAAATGATGGATGTCACTGTGACTATCAAGCAGCCGGTGAA |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 3 | 18 | KMMDVTVTIKQPVKV | CAAAATGATGGATGTCACTGTGACTATCAAGCAGCCGGTGAAGGT |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 4 | 19 | MMDVTVTIKQPVKVV | AATGATGGATGTCACTGTGACTATCAAGCAGCCGGTGAAGGTTGT |
NOMO1-ABCC1 | chr16 | 14966186 | chr16 | 16138307 | 5 | 20 | MDVTVTIKQPVKVVY | GATGGATGTCACTGTGACTATCAAGCAGCCGGTGAAGGTTGTGTA |
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Information of the samples that have these potential fusion neoantigens of NOMO1-ABCC1 |
![]() |
Cancer type | Fusion gene | Hchr | Hbp | Henst | Tchr | Tbp | Tenst | Sample |
ESCA | NOMO1-ABCC1 | chr16 | 14966186 | ENST00000287667 | chr16 | 16138307 | ENST00000345148 | TCGA-LN-A4MQ |
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Potential target of CAR-T therapy development for NOMO1-ABCC1 |
![]() |
![]() * Minus value of BPloci means that the break point is located before the CDS. |
- In-frame and retained 'Transmembrane'. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 1026_1046 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D13 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 1090_1110 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D14 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 1112_1132 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D15 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 1204_1224 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D16 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 1227_1247 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D17 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 317_337 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D6 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 364_384 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D7 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 441_461 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D8 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 465_485 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D9 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 548_568 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D10 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 591_611 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D11 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000345148 | 6 | 30 | 968_988 | 0 | 1467.0 | Transmembrane | Note=Helical%3B Name%3D12 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 1026_1046 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D13 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 1090_1110 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D14 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 1112_1132 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D15 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 1204_1224 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D16 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 1227_1247 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D17 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 317_337 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D6 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 364_384 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D7 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 441_461 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D8 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 465_485 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D9 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 548_568 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D10 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 591_611 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D11 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000346370 | 6 | 30 | 968_988 | 0 | 1476.0 | Transmembrane | Note=Helical%3B Name%3D12 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 1026_1046 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D13 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 1090_1110 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D14 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 1112_1132 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D15 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 1204_1224 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D16 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 1227_1247 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D17 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 317_337 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D6 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 364_384 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D7 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 441_461 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D8 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 465_485 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D9 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 548_568 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D10 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 591_611 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D11 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000349029 | 6 | 29 | 968_988 | 0 | 1417.0 | Transmembrane | Note=Helical%3B Name%3D12 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 1026_1046 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D13 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 1090_1110 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D14 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 1112_1132 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D15 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 1204_1224 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D16 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 1227_1247 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D17 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 317_337 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D6 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 364_384 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D7 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 441_461 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D8 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 465_485 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D9 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 548_568 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D10 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 591_611 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D11 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000351154 | 6 | 30 | 968_988 | 0 | 1473.0 | Transmembrane | Note=Helical%3B Name%3D12 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 1026_1046 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D13 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 1090_1110 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D14 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 1112_1132 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D15 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 1204_1224 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D16 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 1227_1247 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D17 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 317_337 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D6 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 364_384 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D7 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 441_461 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D8 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 465_485 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D9 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 548_568 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D10 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 591_611 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D11 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399408 | 6 | 32 | 968_988 | 0 | 1542.0 | Transmembrane | Note=Helical%3B Name%3D12 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 1026_1046 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D13 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 1090_1110 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D14 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 1112_1132 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D15 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 1204_1224 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D16 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 1227_1247 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D17 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 317_337 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D6 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 364_384 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D7 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 441_461 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D8 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 465_485 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D9 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 548_568 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D10 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 591_611 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D11 | |
Tgene | ABCC1 | chr16:14966186 | chr16:16138307 | ENST00000399410 | 6 | 31 | 968_988 | 0 | 1532.0 | Transmembrane | Note=Helical%3B Name%3D12 |
![]() * We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image. |
Hgene | Hchr | Hbp | Henst | Tgene | Tchr | Tbp | Tenst | DeepLoc result |
Top |
Related Drugs to NOMO1-ABCC1 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
Top |
Related Diseases to NOMO1-ABCC1 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |