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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>100159_100159_1_YWHAE-SPNS3_YWHAE_chr17_1264385_ENST00000571732_SPNS3_chr17_4381866_ENST00000333476_length(amino acids)=265AA_BP=170
MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAA
NTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRCSWALGSCF

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>100159_100159_2_YWHAE-SPNS3_YWHAE_chr17_1264385_ENST00000571732_SPNS3_chr17_4381866_ENST00000355530_length(amino acids)=265AA_BP=170
MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAA
NTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRCSWALGSCF

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>100159_100159_3_YWHAE-SPNS3_YWHAE_chr17_1264386_ENST00000571732_SPNS3_chr17_4381867_ENST00000333476_length(amino acids)=265AA_BP=170
MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAA
NTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRCSWALGSCF

--------------------------------------------------------------

>100159_100159_4_YWHAE-SPNS3_YWHAE_chr17_1264386_ENST00000571732_SPNS3_chr17_4381867_ENST00000355530_length(amino acids)=265AA_BP=170
MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAA
NTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRCSWALGSCF

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