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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>102383_102383_1_ZNF564-CACNA1A_ZNF564_chr19_12662144_ENST00000339282_CACNA1A_chr19_13630317_ENST00000592864_length(amino acids)=118AA_BP=49
MFRVRCVWVPVSASPVAPVAPPQRLARWDLHRPERAVGRTPGHPGSQEMEATRGCASPKQGSKPRRGKQRTLDLRNPTMRSKGNLLDDDK

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>102383_102383_2_ZNF564-CACNA1A_ZNF564_chr19_12662144_ENST00000416136_CACNA1A_chr19_13630317_ENST00000592864_length(amino acids)=94AA_BP=25
MARWDLHRPERAVGRTPGHPGSQEMEATRGCASPKQGSKPRRGKQRTLDLRNPTMRSKGNLLDDDKERAQDESCMPGKVLIRPCDKSSGK

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