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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>10837_10837_1_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000261318_MDM2_chr12_69229608_ENST00000258149_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_2_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000261318_MDM2_chr12_69229608_ENST00000356290_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_3_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000261318_MDM2_chr12_69229608_ENST00000428863_length(amino acids)=280AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDED
YWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQES
EDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQP

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>10837_10837_4_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000261318_MDM2_chr12_69229608_ENST00000462284_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_5_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000261318_MDM2_chr12_69229608_ENST00000540827_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_6_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000536380_MDM2_chr12_69229608_ENST00000258149_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_7_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000536380_MDM2_chr12_69229608_ENST00000356290_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_8_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000536380_MDM2_chr12_69229608_ENST00000428863_length(amino acids)=280AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDED
YWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQES
EDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQP

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>10837_10837_9_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000536380_MDM2_chr12_69229608_ENST00000462284_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_10_C12orf49-MDM2_C12orf49_chr12_117175594_ENST00000536380_MDM2_chr12_69229608_ENST00000540827_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_11_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69229609_ENST00000258149_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_12_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69229609_ENST00000356290_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_13_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69229609_ENST00000428863_length(amino acids)=280AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDED
YWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQES
EDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQP

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>10837_10837_14_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69229609_ENST00000462284_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_15_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69229609_ENST00000540827_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_16_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69233054_ENST00000258148_length(amino acids)=228AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQA
EEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQG

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>10837_10837_17_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000261318_MDM2_chr12_69233054_ENST00000393412_length(amino acids)=228AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQA
EEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQG

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>10837_10837_18_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69229609_ENST00000258149_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_19_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69229609_ENST00000356290_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_20_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69229609_ENST00000428863_length(amino acids)=280AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDED
YWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQES
EDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQP

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>10837_10837_21_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69229609_ENST00000462284_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_22_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69229609_ENST00000540827_length(amino acids)=306AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEV
YQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKT
IVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKT

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>10837_10837_23_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69233054_ENST00000258148_length(amino acids)=228AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQA
EEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQG

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>10837_10837_24_C12orf49-MDM2_C12orf49_chr12_117175595_ENST00000536380_MDM2_chr12_69233054_ENST00000393412_length(amino acids)=228AA_BP=37
MVNLAAMVWRRLLRKRWVLALVFGLSLVYFLSSTFKQDYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQA
EEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQG

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