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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>12164_12164_1_C9orf96-DBH_C9orf96_chr9_136245993_ENST00000371957_DBH_chr9_136516756_ENST00000393056_length(amino acids)=298AA_BP=1
MTHAGWGQGWTLARTRSLLIMLGPGSNRRRPTQGERGPGSPGEPMEKYQVLYQLNPGALGVNLVVEEMETKVKHVIKQALPPSGIHIFAS
QLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQ
LELCKSAVDAGFLQKYFHLINRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKVISTL

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>12164_12164_2_C9orf96-DBH_C9orf96_chr9_136245993_ENST00000426926_DBH_chr9_136516756_ENST00000393056_length(amino acids)=326AA_BP=1
MGVWGQRAGGTPECLEGAVRAGRIPRVPLTHAGWGQGWTLARTRSLLIMLGPGSNRRRPTQGERGPGSPGEPMEKYQVLYQLNPGALGVN
LVVEEMETKVKHVIKQALPPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTE
DRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLINRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPI

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