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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>12637_12637_1_CAMK1D-CDC123_CAMK1D_chr10_12391909_ENST00000378845_CDC123_chr10_12272947_ENST00000281141_length(amino acids)=220AA_BP=31
MARENGESSSSWKKQAEDIKKIFEFKETLGTFIHCTDDSPDPCIEYELVLRKWCELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQK
EEIRRCIQDFFKKHIQYKFLDEDFVFDIYRDSRGKVWLIDFNPFGEVTDSLLFTWEELISENNLNGDFSEVDAQEQDSPAFRCTNSEVTV

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>12637_12637_2_CAMK1D-CDC123_CAMK1D_chr10_12391909_ENST00000378847_CDC123_chr10_12272947_ENST00000281141_length(amino acids)=220AA_BP=31
MARENGESSSSWKKQAEDIKKIFEFKETLGTFIHCTDDSPDPCIEYELVLRKWCELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQK
EEIRRCIQDFFKKHIQYKFLDEDFVFDIYRDSRGKVWLIDFNPFGEVTDSLLFTWEELISENNLNGDFSEVDAQEQDSPAFRCTNSEVTV

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