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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>13499_13499_1_CC2D1A-MRI1_CC2D1A_chr19_14023406_ENST00000318003_MRI1_chr19_13882935_ENST00000040663_length(amino acids)=164AA_BP=119
MKMHKRKGPPGPPGRGAAAARQLGLLVDLSPDGLMIPEDGANDEELEAEFLALVGGQPPALEKLKGKGPLPMEAIEKMASLCMRDPDEDE

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>13499_13499_2_CC2D1A-MRI1_CC2D1A_chr19_14023406_ENST00000318003_MRI1_chr19_13882935_ENST00000319545_length(amino acids)=164AA_BP=119
MKMHKRKGPPGPPGRGAAAARQLGLLVDLSPDGLMIPEDGANDEELEAEFLALVGGQPPALEKLKGKGPLPMEAIEKMASLCMRDPDEDE

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>13499_13499_3_CC2D1A-MRI1_CC2D1A_chr19_14023406_ENST00000589606_MRI1_chr19_13882935_ENST00000040663_length(amino acids)=162AA_BP=117
MHKRKGPPGPPGRGAAAARQLGLLVDLSPDGLMIPEDGANDEELEAEFLALVGGQPPALEKLKGKGPLPMEAIEKMASLCMRDPDEDEEE

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>13499_13499_4_CC2D1A-MRI1_CC2D1A_chr19_14023406_ENST00000589606_MRI1_chr19_13882935_ENST00000319545_length(amino acids)=162AA_BP=117
MHKRKGPPGPPGRGAAAARQLGLLVDLSPDGLMIPEDGANDEELEAEFLALVGGQPPALEKLKGKGPLPMEAIEKMASLCMRDPDEDEEE

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