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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>15219_15219_1_CDK19-LYZ_CDK19_chr6_110988636_ENST00000323817_LYZ_chr12_69743887_ENST00000548839_length(amino acids)=208AA_BP=147
MVRRRACFVGARLWWPEIPGGLRVWTSSVGGSRLFSRRKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWL
LFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLGCVWPNGRVVTTHELQTTMLETEALIMGYFRSI

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>15219_15219_2_CDK19-LYZ_CDK19_chr6_110988637_ENST00000323817_LYZ_chr12_69743888_ENST00000548839_length(amino acids)=208AA_BP=147
MVRRRACFVGARLWWPEIPGGLRVWTSSVGGSRLFSRRKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWL
LFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLGCVWPNGRVVTTHELQTTMLETEALIMGYFRSI

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