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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>17237_17237_1_CLN6-ARL6IP5_CLN6_chr15_68510874_ENST00000418702_ARL6IP5_chr3_69150990_ENST00000273258_length(amino acids)=162AA_BP=33
MMRLPARLPSTSTSGSTSHCRTGFWTLGVPLPWFLSPFNMILGGIVVVLVFTGFVWAAHNKDVLRRMKKRYPTTFVMVVMLASYFLISMF

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>17237_17237_2_CLN6-ARL6IP5_CLN6_chr15_68510874_ENST00000418702_ARL6IP5_chr3_69150990_ENST00000478935_length(amino acids)=100AA_BP=
MKGLRNHGNGTPKVQNPVLQCEVEPEVEVEGSRAGSLISAHRAMPGLQEGGAQLRAWAARRSQVLPPPRRLHGCPAGPSALPFRGRDRFS

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