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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>20508_20508_1_CTSE-WBP2_CTSE_chr1_206325437_ENST00000358184_WBP2_chr17_73842868_ENST00000433525_length(amino acids)=281AA_BP=226
MLVGLTMKTLLLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDMEYFGTISI
GSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQ
TFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSRASRRHLPTTHRKIRRPSRPSCLPASHPHLSTLPLPSGLCWGLG

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>20508_20508_2_CTSE-WBP2_CTSE_chr1_206325437_ENST00000360218_WBP2_chr17_73842868_ENST00000433525_length(amino acids)=281AA_BP=226
MLVGLTMKTLLLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDMEYFGTISI
GSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQ
TFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSRASRRHLPTTHRKIRRPSRPSCLPASHPHLSTLPLPSGLCWGLG

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>20508_20508_3_CTSE-WBP2_CTSE_chr1_206325437_ENST00000361052_WBP2_chr17_73842868_ENST00000433525_length(amino acids)=286AA_BP=231
MLVGLTMKTLLLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDMEYFGTISI
GSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFSYQVEGLTVVGQQFGESV
TEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSRASRRHLPTTHRKIRRPSRPSCLPASHPHLSTLPLPSGL

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>20508_20508_4_CTSE-WBP2_CTSE_chr1_206325437_ENST00000432969_WBP2_chr17_73842868_ENST00000433525_length(amino acids)=200AA_BP=145
MEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQF
GESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSRASRRHLPTTHRKIRRPSRPSCLPASHPHLSTLPL

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