FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>20694_20694_1_CUL5-ELMOD1_CUL5_chr11_107925682_ENST00000393094_ELMOD1_chr11_107518194_ENST00000265840_length(amino acids)=511AA_BP=317
MVLGTRSALSARCSSAHHTLVRADGPWALVGAPASGQGLAGSATNSRVVSRESKLKNMATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQE
SVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQG
SNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERF
YRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYN
LQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHF

--------------------------------------------------------------

>20694_20694_2_CUL5-ELMOD1_CUL5_chr11_107925682_ENST00000393094_ELMOD1_chr11_107518194_ENST00000443271_length(amino acids)=503AA_BP=317
MVLGTRSALSARCSSAHHTLVRADGPWALVGAPASGQGLAGSATNSRVVSRESKLKNMATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQE
SVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQG
SNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERF
YRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYN
LQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLM

--------------------------------------------------------------

>20694_20694_3_CUL5-ELMOD1_CUL5_chr11_107925682_ENST00000393094_ELMOD1_chr11_107518194_ENST00000531234_length(amino acids)=511AA_BP=317
MVLGTRSALSARCSSAHHTLVRADGPWALVGAPASGQGLAGSATNSRVVSRESKLKNMATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQE
SVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMGKQG
SNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERF
YRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYN
LQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHF

--------------------------------------------------------------