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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>22290_22290_1_DENND6A-FHIT_DENND6A_chr3_57678509_ENST00000311128_FHIT_chr3_59908140_ENST00000476844_length(amino acids)=143AA_BP=73
MRAWGPALEGRWTKRWQGPRAARRRPLWRREARQRTMKRTMAVAGACCAGTASPPGCTACVWWASTWSWARPWSTFTSMFFPGRLETFTG

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>22290_22290_2_DENND6A-FHIT_DENND6A_chr3_57678509_ENST00000311128_FHIT_chr3_59908140_ENST00000492590_length(amino acids)=177AA_BP=0
MKKLHFHADSVPLGERRGAVFKLVGNSSFAGIQDLKNICVTESRPAELRLLLPFPPLISKRQESPPCHVSGAPHRCCHSCESLQPSWEEH

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