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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>24340_24340_1_DTD1-POU2F3_DTD1_chr20_18608877_ENST00000377452_POU2F3_chr11_120186070_ENST00000260264_length(amino acids)=239AA_BP=158
MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCVLKGNK
PDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESPAPGTATSDPKQVSPSGSLGPLSVPPVHSTMPG

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>24340_24340_2_DTD1-POU2F3_DTD1_chr20_18608877_ENST00000377452_POU2F3_chr11_120186070_ENST00000543440_length(amino acids)=239AA_BP=158
MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCVLKGNK
PDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESPAPGTATSDPKQVSPSGSLGPLSVPPVHSTMPG

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