FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>26197_26197_1_ELK3-LIN7A_ELK3_chr12_96617551_ENST00000228741_LIN7A_chr12_81242101_ENST00000552864_length(amino acids)=237AA_BP=71
MGMESAITLWQFLLQLLLDQKHEHLICWTSNDGEFKLLKAEEVAKLWGLRKNKTNMNYDKLSRALRYYYDKVYQYMHETITVNGCPEFRA
RATAKATVAAFAASEGHSHPRVVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLK

--------------------------------------------------------------

>26197_26197_2_ELK3-LIN7A_ELK3_chr12_96617551_ENST00000552142_LIN7A_chr12_81242101_ENST00000552864_length(amino acids)=237AA_BP=71
MGMESAITLWQFLLQLLLDQKHEHLICWTSNDGEFKLLKAEEVAKLWGLRKNKTNMNYDKLSRALRYYYDKVYQYMHETITVNGCPEFRA
RATAKATVAAFAASEGHSHPRVVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLK

--------------------------------------------------------------