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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>27646_27646_1_ETHE1-CEACAM1_ETHE1_chr19_44030353_ENST00000292147_CEACAM1_chr19_43013380_ENST00000161559_length(amino acids)=164AA_BP=125
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGL

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>27646_27646_2_ETHE1-CEACAM1_ETHE1_chr19_44030353_ENST00000292147_CEACAM1_chr19_43013380_ENST00000352591_length(amino acids)=164AA_BP=125
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGL

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>27646_27646_3_ETHE1-CEACAM1_ETHE1_chr19_44030353_ENST00000600651_CEACAM1_chr19_43013380_ENST00000161559_length(amino acids)=164AA_BP=125
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGL

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>27646_27646_4_ETHE1-CEACAM1_ETHE1_chr19_44030353_ENST00000600651_CEACAM1_chr19_43013380_ENST00000352591_length(amino acids)=164AA_BP=125
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGL

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