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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>28761_28761_1_FAM188A-COX7A2_FAM188A_chr10_15889863_ENST00000277632_COX7A2_chr6_75950981_ENST00000230459_length(amino acids)=186AA_BP=109
MQVALSPFFFPASPSNSFAAAVPQLLFPELPLPHVPGQESAKRRSARRFLIMSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESE
GSALEQFEGGPCAVIAPVQALRQIGQRTISTASRRHFKNKVPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVAS

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>28761_28761_2_FAM188A-COX7A2_FAM188A_chr10_15889863_ENST00000277632_COX7A2_chr6_75950981_ENST00000370081_length(amino acids)=186AA_BP=109
MQVALSPFFFPASPSNSFAAAVPQLLFPELPLPHVPGQESAKRRSARRFLIMSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESE
GSALEQFEGGPCAVIAPVQALRQIGQRTISTASRRHFKNKVPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVAS

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>28761_28761_3_FAM188A-COX7A2_FAM188A_chr10_15889863_ENST00000277632_COX7A2_chr6_75950981_ENST00000370089_length(amino acids)=186AA_BP=109
MQVALSPFFFPASPSNSFAAAVPQLLFPELPLPHVPGQESAKRRSARRFLIMSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESE
GSALEQFEGGPCAVIAPVQALRQIGQRTISTASRRHFKNKVPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVAS

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>28761_28761_4_FAM188A-COX7A2_FAM188A_chr10_15889863_ENST00000277632_COX7A2_chr6_75950981_ENST00000509698_length(amino acids)=194AA_BP=109
MQVALSPFFFPASPSNSFAAAVPQLLFPELPLPHVPGQESAKRRSARRFLIMSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESE
GSALEQFEGGPCAVIAPVQALRQIGQRTISTASRRHFKNKVPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGKAFGMFEGTAYA

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