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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>29884_29884_1_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000265094_NPM1_chr5_170832305_ENST00000296930_length(amino acids)=113AA_BP=42
MPPPPSPPPPGPFAAARGERGGAAGAAMEPDSVIEDKTIELMGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINY

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>29884_29884_2_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000265094_NPM1_chr5_170832305_ENST00000351986_length(amino acids)=117AA_BP=7
MPEILNSLLVSHPEAILHIIDEFGFHFGKRTTFFYTCLHFCFNVFYRTRSFWCFRSFFLFLEGFLSHELDGLVLNHRVGLHGGPGGPASL

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>29884_29884_3_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000265094_NPM1_chr5_170832305_ENST00000393820_length(amino acids)=128AA_BP=1
MLMTLSMDYICLSFSFLPIFGLNLHVVPRTVQCAFSILACIFALMSSTELGPFGVLGVFSCFLKDSCPMSSMVLSSITESGSMAAPAAPP

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>29884_29884_4_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000265094_NPM1_chr5_170832305_ENST00000517671_length(amino acids)=117AA_BP=7
MPEILNSLLVSHPEAILHIIDEFGFHFGKRTTFFYTCLHFCFNVFYRTRSFWCFRSFFLFLEGFLSHELDGLVLNHRVGLHGGPGGPASL

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>29884_29884_5_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000296933_NPM1_chr5_170832305_ENST00000296930_length(amino acids)=151AA_BP=1
MMNLASTLGREPPFSILACIFALMSSTELGPFGVLGVFSCFLKDSCPMSSMVLSSITESGSMAAPAAPPRSPRAAANGPGGGGDGGGGRG

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>29884_29884_6_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000296933_NPM1_chr5_170832305_ENST00000351986_length(amino acids)=121AA_BP=
MSKLLTLQVCTSYAHRPVLLSARSSASGCQEPATWCQRLGPTTLCGPRRLLGGVVPDLRTAFAEGEGGAAGGPGGLAARVGAIAASASAA

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>29884_29884_7_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000296933_NPM1_chr5_170832305_ENST00000393820_length(amino acids)=172AA_BP=1
MLMTLSMDYICLSFSFLPIFGLNLHVVPRTVQCAFSILACIFALMSSTELGPFGVLGVFSCFLKDSCPMSSMVLSSITESGSMAAPAAPP

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>29884_29884_8_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000296933_NPM1_chr5_170832305_ENST00000517671_length(amino acids)=151AA_BP=1
MMNLASTLGREPPFSILACIFALMSSTELGPFGVLGVFSCFLKDSCPMSSMVLSSITESGSMAAPAAPPRSPRAAANGPGGGGDGGGGRG

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>29884_29884_9_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000393802_NPM1_chr5_170832305_ENST00000296930_length(amino acids)=113AA_BP=42
MPPPPSPPPPGPFAAARGERGGAAGAAMEPDSVIEDKTIELMGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINY

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>29884_29884_10_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000393802_NPM1_chr5_170832305_ENST00000351986_length(amino acids)=117AA_BP=7
MPEILNSLLVSHPEAILHIIDEFGFHFGKRTTFFYTCLHFCFNVFYRTRSFWCFRSFFLFLEGFLSHELDGLVLNHRVGLHGGPGGPASL

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>29884_29884_11_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000393802_NPM1_chr5_170832305_ENST00000393820_length(amino acids)=132AA_BP=1
MLMTLSMDYICLSFSFLPIFGLNLHVVPRTVQCAFSILACIFALMSSTELGPFGVLGVFSCFLKDSCPMSSMVLSSITESGSMAAPAAPP

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>29884_29884_12_FBXW11-NPM1_FBXW11_chr5_171433461_ENST00000393802_NPM1_chr5_170832305_ENST00000517671_length(amino acids)=117AA_BP=7
MPEILNSLLVSHPEAILHIIDEFGFHFGKRTTFFYTCLHFCFNVFYRTRSFWCFRSFFLFLEGFLSHELDGLVLNHRVGLHGGPGGPASL

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