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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>309_309_1_ABCC5-TGFBI_ABCC5_chr3_183705558_ENST00000382494_TGFBI_chr5_135397183_ENST00000305126_length(amino acids)=263AA_BP=221
MEQGRRNSDVKLTVCEPWNLHSEKMKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLSLDASMH
SQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE

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>309_309_2_ABCC5-TGFBI_ABCC5_chr3_183705558_ENST00000382494_TGFBI_chr5_135397183_ENST00000442011_length(amino acids)=255AA_BP=221
MEQGRRNSDVKLTVCEPWNLHSEKMKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLSLDASMH
SQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE

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>309_309_3_ABCC5-TGFBI_ABCC5_chr3_183705558_ENST00000382494_TGFBI_chr5_135397183_ENST00000508076_length(amino acids)=255AA_BP=221
MEQGRRNSDVKLTVCEPWNLHSEKMKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLSLDASMH
SQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE

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