FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>37427_37427_1_HOXB3-FAP_HOXB3_chr17_46651199_ENST00000465120_FAP_chr2_163044873_ENST00000188790_length(amino acids)=243AA_BP=22
MEEALRHEWDLQSSGERRREAQRYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKF
IEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLI

--------------------------------------------------------------

>37427_37427_2_HOXB3-FAP_HOXB3_chr17_46651199_ENST00000465120_FAP_chr2_163044873_ENST00000443424_length(amino acids)=243AA_BP=22
MEEALRHEWDLQSSGERRREAQRYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKF
IEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLI

--------------------------------------------------------------