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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>37929_37929_1_HSPB1-CAMKK2_HSPB1_chr7_75933612_ENST00000248553_CAMKK2_chr12_121682418_ENST00000392474_length(amino acids)=231AA_BP=
MEEHKSAAEPSAPHFSEQTSRAESASMTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIE
SPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVS

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>37929_37929_2_HSPB1-CAMKK2_HSPB1_chr7_75933612_ENST00000429938_CAMKK2_chr12_121682418_ENST00000392474_length(amino acids)=166AA_BP=1
MSQNARGFGSATPHTRLSSQPAATVDVMESSPFFFFVPLSSDRDSHSLVGFLTGGCFELYLRKTEDKCIKRTHRWRGRHSQWRQQGWASG

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