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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>38416_38416_1_IFT20-GLS_IFT20_chr17_26658882_ENST00000578122_GLS_chr2_191827556_ENST00000320717_length(amino acids)=138AA_BP=74
MTLAPMTHLLLTATVTPSEQNSSREPGWETAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDSGITLPWMKHCTLDTMM

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>38416_38416_2_IFT20-GLS_IFT20_chr17_26658882_ENST00000578985_GLS_chr2_191827556_ENST00000320717_length(amino acids)=138AA_BP=74
MTLAPMTHLLLTATVTPSEQNSSREPGWETAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDSGITLPWMKHCTLDTMM

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>38416_38416_3_IFT20-GLS_IFT20_chr17_26658882_ENST00000585089_GLS_chr2_191827556_ENST00000320717_length(amino acids)=138AA_BP=74
MTLAPMTHLLLTATVTPSEQNSSREPGWETAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDSGITLPWMKHCTLDTMM

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