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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>40180_40180_1_IQGAP2-ATRNL1_IQGAP2_chr5_75866482_ENST00000274364_ATRNL1_chr10_117278773_ENST00000303745_length(amino acids)=308AA_BP=147
MASEGSRGGRAPGGPPETRRMPHEELPSLQRPRYGSIVDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVEELPPTTELEEGLR
NGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMESIGLPKIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVV
WKIKQTCWASRRREQLLRERQQMASRPFASVDVALEVGAEQTEFLRGPLEGAPKPIAIEPCAGNRAAVLTVFLCLPRGSSGAPPPGQSGL

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>40180_40180_2_IQGAP2-ATRNL1_IQGAP2_chr5_75866482_ENST00000274364_ATRNL1_chr10_117278773_ENST00000355044_length(amino acids)=308AA_BP=147
MASEGSRGGRAPGGPPETRRMPHEELPSLQRPRYGSIVDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVEELPPTTELEEGLR
NGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMESIGLPKIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVV
WKIKQTCWASRRREQLLRERQQMASRPFASVDVALEVGAEQTEFLRGPLEGAPKPIAIEPCAGNRAAVLTVFLCLPRGSSGAPPPGQSGL

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>40180_40180_3_IQGAP2-ATRNL1_IQGAP2_chr5_75866482_ENST00000274364_ATRNL1_chr10_117278773_ENST00000423111_length(amino acids)=308AA_BP=147
MASEGSRGGRAPGGPPETRRMPHEELPSLQRPRYGSIVDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVEELPPTTELEEGLR
NGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMESIGLPKIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVV
WKIKQTCWASRRREQLLRERQQMASRPFASVDVALEVGAEQTEFLRGPLEGAPKPIAIEPCAGNRAAVLTVFLCLPRGSSGAPPPGQSGL

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