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Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >41706_41706_1_KDM1B-PITPNC1_KDM1B_chr6_18171710_ENST00000297792_PITPNC1_chr17_65574302_ENST00000580974_length(amino acids)=402AA_BP=232 MGLAARLQPSCARGARLRRGARSPGRRAPPRWRSERCLFPETPGTSSAQRLFNVMATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATE TTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSNGKTEPS PKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVC FIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEW -------------------------------------------------------------- >41706_41706_2_KDM1B-PITPNC1_KDM1B_chr6_18171710_ENST00000297792_PITPNC1_chr17_65574302_ENST00000581322_length(amino acids)=466AA_BP=232 MGLAARLQPSCARGARLRRGARSPGRRAPPRWRSERCLFPETPGTSSAQRLFNVMATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATE TTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSNGKTEPS PKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVC FIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEW YDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVPKDRPRKKSAPETLTLPDPEKKATLN -------------------------------------------------------------- >41706_41706_3_KDM1B-PITPNC1_KDM1B_chr6_18171710_ENST00000388870_PITPNC1_chr17_65574302_ENST00000580974_length(amino acids)=427AA_BP=257 MSAPPTPGHAVTGAEAAAAAAAEKRLGLAARLQPSCARGARLRRGARSPGRRAPPRWRSERCLFPETPGTSSAQRLFNVMATPRGRTKKK ASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYR SHKDGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKCSFLPKFSIHIET KYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVE -------------------------------------------------------------- >41706_41706_4_KDM1B-PITPNC1_KDM1B_chr6_18171710_ENST00000388870_PITPNC1_chr17_65574302_ENST00000581322_length(amino acids)=491AA_BP=257 MSAPPTPGHAVTGAEAAAAAAAEKRLGLAARLQPSCARGARLRRGARSPGRRAPPRWRSERCLFPETPGTSSAQRLFNVMATPRGRTKKK ASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYR SHKDGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKCSFLPKFSIHIET KYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVE QFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVP -------------------------------------------------------------- >41706_41706_5_KDM1B-PITPNC1_KDM1B_chr6_18171710_ENST00000397244_PITPNC1_chr17_65574302_ENST00000580974_length(amino acids)=427AA_BP=257 MSAPPTPGHAVTGAEAAAAAAAEKRLGLAARLQPSCARGARLRRGARSPGRRAPPRWRSERCLFPETPGTSSAQRLFNVMATPRGRTKKK ASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYR SHKDGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKCSFLPKFSIHIET KYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVE -------------------------------------------------------------- >41706_41706_6_KDM1B-PITPNC1_KDM1B_chr6_18171710_ENST00000397244_PITPNC1_chr17_65574302_ENST00000581322_length(amino acids)=491AA_BP=257 MSAPPTPGHAVTGAEAAAAAAAEKRLGLAARLQPSCARGARLRRGARSPGRRAPPRWRSERCLFPETPGTSSAQRLFNVMATPRGRTKKK ASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYR SHKDGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKCSFLPKFSIHIET KYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVE QFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVP -------------------------------------------------------------- |