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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>41907_41907_1_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000377967_NDUFB11_chrX_47002143_ENST00000276062_length(amino acids)=169AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_2_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000377967_NDUFB11_chrX_47002143_ENST00000377811_length(amino acids)=159AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_3_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000382899_NDUFB11_chrX_47002143_ENST00000276062_length(amino acids)=169AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_4_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000382899_NDUFB11_chrX_47002143_ENST00000377811_length(amino acids)=159AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_5_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000536777_NDUFB11_chrX_47002143_ENST00000276062_length(amino acids)=169AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_6_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000536777_NDUFB11_chrX_47002143_ENST00000377811_length(amino acids)=159AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_7_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000543216_NDUFB11_chrX_47002143_ENST00000276062_length(amino acids)=169AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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>41907_41907_8_KDM6A-NDUFB11_KDM6A_chrX_44733233_ENST00000543216_NDUFB11_chrX_47002143_ENST00000377811_length(amino acids)=159AA_BP=75
MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGARTKALLGKNPDSHGYDKDPVLDV

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