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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>52999_52999_1_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000223215_ATP6V0A1_chr17_40673059_ENST00000264649_length(amino acids)=209AA_BP=184
MRPRCWPALHGCGLCGARCSATLRRAAWDNAAMVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIF
YQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQE

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>52999_52999_2_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000223215_ATP6V0A1_chr17_40673059_ENST00000537728_length(amino acids)=209AA_BP=184
MRPRCWPALHGCGLCGARCSATLRRAAWDNAAMVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIF
YQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQE

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>52999_52999_3_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000341441_ATP6V0A1_chr17_40673059_ENST00000264649_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_4_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000341441_ATP6V0A1_chr17_40673059_ENST00000537728_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_5_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000378576_ATP6V0A1_chr17_40673059_ENST00000264649_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_6_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000378576_ATP6V0A1_chr17_40673059_ENST00000537728_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_7_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000393187_ATP6V0A1_chr17_40673059_ENST00000264649_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_8_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000393187_ATP6V0A1_chr17_40673059_ENST00000537728_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_9_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000416162_ATP6V0A1_chr17_40673059_ENST00000264649_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_10_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000416162_ATP6V0A1_chr17_40673059_ENST00000537728_length(amino acids)=168AA_BP=143
MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRV

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>52999_52999_11_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000437945_ATP6V0A1_chr17_40673059_ENST00000264649_length(amino acids)=209AA_BP=184
MRPRCWPALHGCGLCGARCSATLRRAAWDNAAMVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIF
YQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQE

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>52999_52999_12_MEST-ATP6V0A1_MEST_chr7_130138000_ENST00000437945_ATP6V0A1_chr17_40673059_ENST00000537728_length(amino acids)=209AA_BP=184
MRPRCWPALHGCGLCGARCSATLRRAAWDNAAMVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIF
YQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQE

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