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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>54605_54605_1_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000331268_PSMA4_chr15_78841131_ENST00000413382_length(amino acids)=357AA_BP=301
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRSEKSLKTHEDIVALFPVPEGAPSVHHPLLTS
SWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVD
PTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT

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>54605_54605_2_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000331268_PSMA4_chr15_78841131_ENST00000559082_length(amino acids)=357AA_BP=301
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRSEKSLKTHEDIVALFPVPEGAPSVHHPLLTS
SWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVD
PTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT

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>54605_54605_3_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000379535_PSMA4_chr15_78841131_ENST00000413382_length(amino acids)=394AA_BP=338
MNQGPRKFPQKRGFAPGPARPRLLSPNTQGAEDATNSRHSGAGAGSTKQKRMIPFPHPQVTDALGRYSNYILSSTVESPSLRSMNFEKQG
ERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQK
NVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSIL
EDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEIATLTRENGKTVIRV

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>54605_54605_4_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000379535_PSMA4_chr15_78841131_ENST00000559082_length(amino acids)=394AA_BP=338
MNQGPRKFPQKRGFAPGPARPRLLSPNTQGAEDATNSRHSGAGAGSTKQKRMIPFPHPQVTDALGRYSNYILSSTVESPSLRSMNFEKQG
ERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQK
NVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSIL
EDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEIATLTRENGKTVIRV

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>54605_54605_5_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000426013_PSMA4_chr15_78841131_ENST00000413382_length(amino acids)=318AA_BP=262
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMR
GAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQ
LFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEI

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>54605_54605_6_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000426013_PSMA4_chr15_78841131_ENST00000559082_length(amino acids)=318AA_BP=262
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMR
GAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQ
LFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEI

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>54605_54605_7_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000558502_PSMA4_chr15_78841131_ENST00000413382_length(amino acids)=249AA_BP=193
MQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVK
IPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADH

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>54605_54605_8_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000558502_PSMA4_chr15_78841131_ENST00000559082_length(amino acids)=249AA_BP=193
MQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVK
IPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADH

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>54605_54605_9_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000558746_PSMA4_chr15_78841131_ENST00000413382_length(amino acids)=291AA_BP=235
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQKTKKNKQKT
PGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNT
DNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEIATLTRENGKTVIRVLKQKEVEQLIKKH

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>54605_54605_10_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000558746_PSMA4_chr15_78841131_ENST00000559082_length(amino acids)=291AA_BP=235
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQKTKKNKQKT
PGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNT
DNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEIATLTRENGKTVIRVLKQKEVEQLIKKH

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>54605_54605_11_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000559345_PSMA4_chr15_78841131_ENST00000413382_length(amino acids)=301AA_BP=245
MCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVE
VKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDY
ANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEIATLTRENGKTVIRVLKQ

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>54605_54605_12_MORF4L1-PSMA4_MORF4L1_chr15_79186572_ENST00000559345_PSMA4_chr15_78841131_ENST00000559082_length(amino acids)=301AA_BP=245
MCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVE
VKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDY
ANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVEIATLTRENGKTVIRVLKQ

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