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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>55914_55914_1_MTSS1L-DGCR8_MTSS1L_chr16_70719625_ENST00000338779_DGCR8_chr22_20077498_ENST00000351989_length(amino acids)=537AA_BP=37
MRRELPAPRPPRRPPAPLRHGPRRPPEARDPGARRGRPLSAAWRREARPGLGASARAAWPPPLRCSPRSVRLAAAAARPSQSMETAEKEC
GALGGLFQAIVNDMKKHDPPLSSIPCLHYKKMKDNEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAA
PGALGQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVIN
PNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELE
YFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHP

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>55914_55914_2_MTSS1L-DGCR8_MTSS1L_chr16_70719625_ENST00000338779_DGCR8_chr22_20077498_ENST00000383024_length(amino acids)=504AA_BP=37
MRRELPAPRPPRRPPAPLRHGPRRPPEARDPGARRGRPLSAAWRREARPGLGASARAAWPPPLRCSPRSVRLAAAAARPSQSMETAEKEC
GALGGLFQAIVNDMKKHDPPLSSIPCLHYKKMKDNEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAA
PGALGQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVIN
PNGKSEVCILHEYMQRVLKVRPVYNFFECARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLK
RNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQ

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>55914_55914_3_MTSS1L-DGCR8_MTSS1L_chr16_70719625_ENST00000338779_DGCR8_chr22_20077498_ENST00000407755_length(amino acids)=504AA_BP=37
MRRELPAPRPPRRPPAPLRHGPRRPPEARDPGARRGRPLSAAWRREARPGLGASARAAWPPPLRCSPRSVRLAAAAARPSQSMETAEKEC
GALGGLFQAIVNDMKKHDPPLSSIPCLHYKKMKDNEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAA
PGALGQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVIN
PNGKSEVCILHEYMQRVLKVRPVYNFFECARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLK
RNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQ

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