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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>56499_56499_1_MYL9-AAR2_MYL9_chr20_35173471_ENST00000279022_AAR2_chr20_34858455_ENST00000397286_length(amino acids)=131AA_BP=1
MEAEVGGSYEPRSSRLQRAMIKSLHFSLGDTARLCLQRGQHVVQVLLVNEAITVLVNHVESLLKLLDLGLVKHCEDIGCGPLWPLLGGLG

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>56499_56499_2_MYL9-AAR2_MYL9_chr20_35173471_ENST00000346786_AAR2_chr20_34858455_ENST00000397286_length(amino acids)=127AA_BP=1
MEAEVGGSYEPRSSRLQRAMIKSLHFSLGDTARLCLQRGQHVVQVLLVNEAITVLVNHVESLLKLLDLGLVKHCEDIGCGPLWPLLGGLG

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