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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>58925_58925_1_NFIC-SPATA33_NFIC_chr19_3359683_ENST00000346156_SPATA33_chr16_89735694_ENST00000301031_length(amino acids)=300AA_BP=16
MLAALGKAGPNGNGERAAASHRVGRAWCTLPESTGEGGAVSHRVGRPGAPSPRALEKGAAVSQGGGRPGAPSLRAREKGATASHRVGRAW
CTLPESTGEGGHGFSQGGVALVHPPQKHWRRGHGFSQGGAGWRALEKGAAASYSVGQPWCTLPESTGEGGGGFSQGGATLVYPPREHWRR
GLQVLTGWGGPGAPSPRALEKGTAVSHGGGRPGAPSLRALEKGATASHKVGRAWCTLPESTGEGGCSFSQGGVGLVQPPREHWRRGLGFS

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>58925_58925_2_NFIC-SPATA33_NFIC_chr19_3359683_ENST00000395111_SPATA33_chr16_89735694_ENST00000301031_length(amino acids)=300AA_BP=16
MLAALGKAGPNGNGERAAASHRVGRAWCTLPESTGEGGAVSHRVGRPGAPSPRALEKGAAVSQGGGRPGAPSLRAREKGATASHRVGRAW
CTLPESTGEGGHGFSQGGVALVHPPQKHWRRGHGFSQGGAGWRALEKGAAASYSVGQPWCTLPESTGEGGGGFSQGGATLVYPPREHWRR
GLQVLTGWGGPGAPSPRALEKGTAVSHGGGRPGAPSLRALEKGATASHKVGRAWCTLPESTGEGGCSFSQGGVGLVQPPREHWRRGLGFS

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>58925_58925_3_NFIC-SPATA33_NFIC_chr19_3359683_ENST00000586919_SPATA33_chr16_89735694_ENST00000301031_length(amino acids)=300AA_BP=16
MLAALGKAGPNGNGERAAASHRVGRAWCTLPESTGEGGAVSHRVGRPGAPSPRALEKGAAVSQGGGRPGAPSLRAREKGATASHRVGRAW
CTLPESTGEGGHGFSQGGVALVHPPQKHWRRGHGFSQGGAGWRALEKGAAASYSVGQPWCTLPESTGEGGGGFSQGGATLVYPPREHWRR
GLQVLTGWGGPGAPSPRALEKGTAVSHGGGRPGAPSLRALEKGATASHKVGRAWCTLPESTGEGGCSFSQGGVGLVQPPREHWRRGLGFS

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>58925_58925_4_NFIC-SPATA33_NFIC_chr19_3359683_ENST00000589123_SPATA33_chr16_89735694_ENST00000301031_length(amino acids)=300AA_BP=16
MLAALGKAGPNGNGERAAASHRVGRAWCTLPESTGEGGAVSHRVGRPGAPSPRALEKGAAVSQGGGRPGAPSLRAREKGATASHRVGRAW
CTLPESTGEGGHGFSQGGVALVHPPQKHWRRGHGFSQGGAGWRALEKGAAASYSVGQPWCTLPESTGEGGGGFSQGGATLVYPPREHWRR
GLQVLTGWGGPGAPSPRALEKGTAVSHGGGRPGAPSLRALEKGATASHKVGRAWCTLPESTGEGGCSFSQGGVGLVQPPREHWRRGLGFS

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