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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>62051_62051_1_OXSR1-CALR_OXSR1_chr3_38284244_ENST00000311806_CALR_chr19_13051124_ENST00000316448_length(amino acids)=422AA_BP=
MPRGDPAPRRRPTRGCSETIGGGAAAAAAAVGGGETRGEETSEVSEFEGGPRAAAAVMSEDSSALPWSINRDDYELQEVIGSGATAVVQA
AYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI
ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF
GITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQEK

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>62051_62051_2_OXSR1-CALR_OXSR1_chr3_38284244_ENST00000446845_CALR_chr19_13051124_ENST00000316448_length(amino acids)=422AA_BP=
MPRGDPAPRRRPTRGCSETIGGGAAAAAAAVGGGETRGEETSEVSEFEGGPRAAAAVMSEDSSALPWSINRDDYELQEVIGSGATAVVQA
AYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI
ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF
GITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQEK

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