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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>63028_63028_1_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000367897_LRRC52_chr1_165513908_ENST00000294818_length(amino acids)=202AA_BP=14
MPCLMCCVKSKKKQNLVQLNIANNPHLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGNPWKCNCSFLDFAIFLIV
FHMDPSDDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTR

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>63028_63028_2_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000367897_LRRC52_chr1_165532741_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_3_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000367897_LRRC52_chr1_165532742_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_4_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000401534_LRRC52_chr1_165513908_ENST00000294818_length(amino acids)=202AA_BP=14
MPCLMCCVKSKKKQNLVQLNIANNPHLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGNPWKCNCSFLDFAIFLIV
FHMDPSDDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTR

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>63028_63028_5_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000401534_LRRC52_chr1_165532741_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_6_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000401534_LRRC52_chr1_165532742_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_7_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000420696_LRRC52_chr1_165513908_ENST00000294818_length(amino acids)=202AA_BP=14
MPCLMCCVKSKKKQNLVQLNIANNPHLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGNPWKCNCSFLDFAIFLIV
FHMDPSDDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTR

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>63028_63028_8_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000420696_LRRC52_chr1_165532741_ENST00000294818_length(amino acids)=196AA_BP=90
MEMDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKT
DDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRR

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>63028_63028_9_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000420696_LRRC52_chr1_165532742_ENST00000294818_length(amino acids)=196AA_BP=90
MEMDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKT
DDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRR

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>63028_63028_10_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000540236_LRRC52_chr1_165513908_ENST00000294818_length(amino acids)=202AA_BP=14
MPCLMCCVKSKKKQNLVQLNIANNPHLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGNPWKCNCSFLDFAIFLIV
FHMDPSDDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTR

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>63028_63028_11_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000540236_LRRC52_chr1_165532741_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_12_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000540236_LRRC52_chr1_165532742_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_13_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000559240_LRRC52_chr1_165513908_ENST00000294818_length(amino acids)=202AA_BP=14
MPCLMCCVKSKKKQNLVQLNIANNPHLLSLHKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGNPWKCNCSFLDFAIFLIV
FHMDPSDDLNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTR

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>63028_63028_14_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000559240_LRRC52_chr1_165532741_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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>63028_63028_15_PBX1-LRRC52_PBX1_chr1_164532548_ENST00000559240_LRRC52_chr1_165532742_ENST00000294818_length(amino acids)=194AA_BP=88
MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDD
LNATCVEPTELTGWPITRVGNPLRYMCITHLDHKDYIFLLLIGFCIFAAGTVAAWLTGVCAVLYQNTRHKSSEEDEDEAGTRVEVSRRIF

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