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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>64080_64080_1_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369031_CDYL2_chr16_80654832_ENST00000562812_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_2_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369031_CDYL2_chr16_80654832_ENST00000563890_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_3_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369031_CDYL2_chr16_80654832_ENST00000566173_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_4_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369031_CDYL2_chr16_80654832_ENST00000570137_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_5_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369037_CDYL2_chr16_80654832_ENST00000562812_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_6_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369037_CDYL2_chr16_80654832_ENST00000563890_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_7_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369037_CDYL2_chr16_80654832_ENST00000566173_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_8_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000369037_CDYL2_chr16_80654832_ENST00000570137_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_9_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000453874_CDYL2_chr16_80654832_ENST00000562812_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_10_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000453874_CDYL2_chr16_80654832_ENST00000563890_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_11_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000453874_CDYL2_chr16_80654832_ENST00000566173_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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>64080_64080_12_PDSS2-CDYL2_PDSS2_chr6_107780193_ENST00000453874_CDYL2_chr16_80654832_ENST00000570137_length(amino acids)=376AA_BP=89
MVTAPGSHLTLRVKNCRFLLVTVSSSSAPGLFPAALLDTPRSQTLPDSNHELSAAAVALATLSWSLGFPASPVVVPVPRHHLLGGLLAWS
VLQVPGPLESGSVRGGEDRGVPHVLHEPSLPAERRAQQHRYAGAEAGGHSAPSAYHSQIMKEVRRALCNAATDDSKLLLLSAVGSVFCSG
LDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ
ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSK

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