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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>64410_64410_1_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000334478_CAPN2_chr1_223949887_ENST00000295006_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

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>64410_64410_2_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000334478_CAPN2_chr1_223949887_ENST00000433674_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

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>64410_64410_3_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000351500_CAPN2_chr1_223949887_ENST00000295006_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

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>64410_64410_4_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000351500_CAPN2_chr1_223949887_ENST00000433674_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

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>64410_64410_5_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000550846_CAPN2_chr1_223949887_ENST00000295006_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

--------------------------------------------------------------

>64410_64410_6_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000550846_CAPN2_chr1_223949887_ENST00000433674_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

--------------------------------------------------------------

>64410_64410_7_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000551018_CAPN2_chr1_223949887_ENST00000295006_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

--------------------------------------------------------------

>64410_64410_8_PFDN5-CAPN2_PFDN5_chr12_53689423_ENST00000551018_CAPN2_chr1_223949887_ENST00000433674_length(amino acids)=202AA_BP=23
MAQSINITELNLPQLEMLKNQLDQFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDG
SGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQ

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