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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>64808_64808_1_PHF1-MYL9_PHF1_chr6_33380570_ENST00000374512_MYL9_chr20_35176434_ENST00000279022_length(amino acids)=223AA_BP=112
MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELLC
CVCRSETVVPGNRLVSCEKCRHGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT

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>64808_64808_2_PHF1-MYL9_PHF1_chr6_33380570_ENST00000374516_MYL9_chr20_35176434_ENST00000279022_length(amino acids)=223AA_BP=112
MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELLC
CVCRSETVVPGNRLVSCEKCRHGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT

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