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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>67862_67862_1_PPP1R1A-ITGA7_PPP1R1A_chr12_54982189_ENST00000257905_ITGA7_chr12_56079072_ENST00000347027_length(amino acids)=248AA_BP=1
MHQDTPALLTLPHGPVPDLPTLISQHSKGKLGGRSSCGWERSVPLRKPILPNLDATPAAHSTLFIPRSHLWGRDGGQPQARLGHGNLGGA
WPWMPIGAQLGMPVSSQDGVCIRALPPGAAPVVPQDGARLLLLELLSVFPRNLHRMVLGHGGLGVLRPFEESHLLRRLGVKVRLQQRDRE

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>67862_67862_2_PPP1R1A-ITGA7_PPP1R1A_chr12_54982189_ENST00000257905_ITGA7_chr12_56079072_ENST00000452168_length(amino acids)=248AA_BP=1
MHQDTPALLTLPHGPVPDLPTLISQHSKGKLGGRSSCGWERSVPLRKPILPNLDATPAAHSTLFIPRSHLWGRDGGQPQARLGHGNLGGA
WPWMPIGAQLGMPVSSQDGVCIRALPPGAAPVVPQDGARLLLLELLSVFPRNLHRMVLGHGGLGVLRPFEESHLLRRLGVKVRLQQRDRE

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>67862_67862_3_PPP1R1A-ITGA7_PPP1R1A_chr12_54982189_ENST00000257905_ITGA7_chr12_56079072_ENST00000553804_length(amino acids)=248AA_BP=1
MHQDTPALLTLPHGPVPDLPTLISQHSKGKLGGRSSCGWERSVPLRKPILPNLDATPAAHSTLFIPRSHLWGRDGGQPQARLGHGNLGGA
WPWMPIGAQLGMPVSSQDGVCIRALPPGAAPVVPQDGARLLLLELLSVFPRNLHRMVLGHGGLGVLRPFEESHLLRRLGVKVRLQQRDRE

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>67862_67862_4_PPP1R1A-ITGA7_PPP1R1A_chr12_54982189_ENST00000547431_ITGA7_chr12_56079072_ENST00000347027_length(amino acids)=200AA_BP=1
MHQDTPALLTLPHGPVPDLPTLISQHSKGKLGGRSSCGWERSVPLRKPILPNLDATPAAHSTLFIPRSHLWGRDGGQPQARLGHGNLGGA
WPWMPIGAQLGMPVSSQDGVCIRALPPGAAPVVPQDGARLLLLELLSVFPRNLHRMVLGHGGLGVLRPFEESHLLRRLGVKVRLQQRDRE

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>67862_67862_5_PPP1R1A-ITGA7_PPP1R1A_chr12_54982189_ENST00000547431_ITGA7_chr12_56079072_ENST00000452168_length(amino acids)=200AA_BP=1
MHQDTPALLTLPHGPVPDLPTLISQHSKGKLGGRSSCGWERSVPLRKPILPNLDATPAAHSTLFIPRSHLWGRDGGQPQARLGHGNLGGA
WPWMPIGAQLGMPVSSQDGVCIRALPPGAAPVVPQDGARLLLLELLSVFPRNLHRMVLGHGGLGVLRPFEESHLLRRLGVKVRLQQRDRE

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>67862_67862_6_PPP1R1A-ITGA7_PPP1R1A_chr12_54982189_ENST00000547431_ITGA7_chr12_56079072_ENST00000553804_length(amino acids)=200AA_BP=1
MHQDTPALLTLPHGPVPDLPTLISQHSKGKLGGRSSCGWERSVPLRKPILPNLDATPAAHSTLFIPRSHLWGRDGGQPQARLGHGNLGGA
WPWMPIGAQLGMPVSSQDGVCIRALPPGAAPVVPQDGARLLLLELLSVFPRNLHRMVLGHGGLGVLRPFEESHLLRRLGVKVRLQQRDRE

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