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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>67973_67973_1_PPP2R1A-CENPP_PPP2R1A_chr19_52693427_ENST00000322088_CENPP_chr9_95373596_ENST00000375579_length(amino acids)=126AA_BP=16
MAAADGDDSLYPIAVLIDELRNEDVQEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLTKVPQRALELDKN

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>67973_67973_2_PPP2R1A-CENPP_PPP2R1A_chr19_52693427_ENST00000322088_CENPP_chr9_95373596_ENST00000375587_length(amino acids)=215AA_BP=
MRRMICLQQGHHSRPLEGKAVSHLSPACWPHSEYQVSITRHLQGERRGCSARHRLERHSLRNIIQPPETTADGHPSTGCACVNLLHPHSS
PTGQHGRRPTLQTSNRHRHHLSVMPCLSMARQGLKPGTLALTFTLFNTCSKLCGSVHTDQGQLNTHHTVRVDIRKAVHVHMCVTRAGRKV

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>67973_67973_3_PPP2R1A-CENPP_PPP2R1A_chr19_52693427_ENST00000477989_CENPP_chr9_95373596_ENST00000375579_length(amino acids)=126AA_BP=16
MAAADGDDSLYPIAVLIDELRNEDVQEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLTKVPQRALELDKN

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>67973_67973_4_PPP2R1A-CENPP_PPP2R1A_chr19_52693427_ENST00000477989_CENPP_chr9_95373596_ENST00000375587_length(amino acids)=215AA_BP=
MRRMICLQQGHHSRPLEGKAVSHLSPACWPHSEYQVSITRHLQGERRGCSARHRLERHSLRNIIQPPETTADGHPSTGCACVNLLHPHSS
PTGQHGRRPTLQTSNRHRHHLSVMPCLSMARQGLKPGTLALTFTLFNTCSKLCGSVHTDQGQLNTHHTVRVDIRKAVHVHMCVTRAGRKV

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