FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68_68_1_AAK1-RPIA_AAK1_chr2_69783992_ENST00000406297_RPIA_chr2_89028796_ENST00000283646_length(amino acids)=304AA_BP=127
MRRNPWISFLKKKKKKKKSRNHRYFALLLPIRKMKKFFDSRREQGGSGLGSGSSGGGGSTSGLGSGYIGRVFGIGRQQVTVDEVLAEGGF
AIVFLVRTSNGMKCALKRMFVNNEHDLQVCKREIQIMARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAG
YASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKM

--------------------------------------------------------------

>68_68_2_AAK1-RPIA_AAK1_chr2_69783992_ENST00000409068_RPIA_chr2_89028796_ENST00000283646_length(amino acids)=304AA_BP=127
MRRNPWISFLKKKKKKKKSRNHRYFALLLPIRKMKKFFDSRREQGGSGLGSGSSGGGGSTSGLGSGYIGRVFGIGRQQVTVDEVLAEGGF
AIVFLVRTSNGMKCALKRMFVNNEHDLQVCKREIQIMARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAG
YASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKM

--------------------------------------------------------------

>68_68_3_AAK1-RPIA_AAK1_chr2_69783992_ENST00000409085_RPIA_chr2_89028796_ENST00000283646_length(amino acids)=304AA_BP=127
MRRNPWISFLKKKKKKKKSRNHRYFALLLPIRKMKKFFDSRREQGGSGLGSGSSGGGGSTSGLGSGYIGRVFGIGRQQVTVDEVLAEGGF
AIVFLVRTSNGMKCALKRMFVNNEHDLQVCKREIQIMARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAG
YASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKM

--------------------------------------------------------------