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 Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >70237_70237_1_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000371621_ROMO1_chr20_34287555_ENST00000374072_length(amino acids)=255AA_BP=196 MQRASGLRARRGLERQTAQWAEKEAQQPPWPVMEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIK LHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISED -------------------------------------------------------------- >70237_70237_2_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000371621_ROMO1_chr20_34287555_ENST00000374077_length(amino acids)=275AA_BP=196 MQRASGLRARRGLERQTAQWAEKEAQQPPWPVMEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIK LHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISED IKSYYTVRQLELENLTMPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTMMQSGGTFGTFMAIG -------------------------------------------------------------- >70237_70237_3_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000371621_ROMO1_chr20_34287555_ENST00000374078_length(amino acids)=275AA_BP=196 MQRASGLRARRGLERQTAQWAEKEAQQPPWPVMEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIK LHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISED IKSYYTVRQLELENLTMPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTMMQSGGTFGTFMAIG -------------------------------------------------------------- >70237_70237_4_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000371621_ROMO1_chr20_34287555_ENST00000397416_length(amino acids)=275AA_BP=196 MQRASGLRARRGLERQTAQWAEKEAQQPPWPVMEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIK LHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISED IKSYYTVRQLELENLTMPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTMMQSGGTFGTFMAIG -------------------------------------------------------------- >70237_70237_5_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000541713_ROMO1_chr20_34287555_ENST00000374072_length(amino acids)=230AA_BP=171 MQGSGIAAGLGAKSATRPRAADGAVGREGGAAAALARHGDGKGVRADRQVRELGGHLPVDHSRIKLHQEDNDYINASLIKMEEAQRSYIL TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTMPVAVGPYG -------------------------------------------------------------- >70237_70237_6_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000541713_ROMO1_chr20_34287555_ENST00000374077_length(amino acids)=250AA_BP=171 MQGSGIAAGLGAKSATRPRAADGAVGREGGAAAALARHGDGKGVRADRQVRELGGHLPVDHSRIKLHQEDNDYINASLIKMEEAQRSYIL TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTMPVAVGPYG -------------------------------------------------------------- >70237_70237_7_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000541713_ROMO1_chr20_34287555_ENST00000374078_length(amino acids)=250AA_BP=171 MQGSGIAAGLGAKSATRPRAADGAVGREGGAAAALARHGDGKGVRADRQVRELGGHLPVDHSRIKLHQEDNDYINASLIKMEEAQRSYIL TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTMPVAVGPYG -------------------------------------------------------------- >70237_70237_8_PTPN1-ROMO1_PTPN1_chr20_49191191_ENST00000541713_ROMO1_chr20_34287555_ENST00000397416_length(amino acids)=250AA_BP=171 MQGSGIAAGLGAKSATRPRAADGAVGREGGAAAALARHGDGKGVRADRQVRELGGHLPVDHSRIKLHQEDNDYINASLIKMEEAQRSYIL TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTMPVAVGPYG -------------------------------------------------------------- |
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