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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>70767_70767_1_PVR-ZNF233_PVR_chr19_45150842_ENST00000344956_ZNF233_chr19_44768467_ENST00000334152_length(amino acids)=767AA_BP=489
MELEEVGIPLPTPGTGGAAPRGFQDLSSGSWTRSDRGRASGRREARRRPREAQLLGATGMARAMAAAWPLLLVALLVLSWPPPGTGDVVV
QAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNY
TCLFVTFPQGSRSVDIWLRVLVLPSQDPALPQKEQEKMTKFQLLAIRLRLHLLDVVGDGDIQGCGCGLHQGGAGVAGPCPEKAVPRCDAG
ELQEPAVSGLSTLQTRCDITVGKRRQASDDGDRNPRRWVFRQRIAHQHDDHGVHKREKAFSHNNCGKDCVKESSQHSIIQSGEQTSDENG
KGLSVGSNLELHQQLHLRDKPHVNVEYGKGIGYSSGLPRHQCFHIGEKCYRNGDSGEGFSQGSHLQPHQRVSTGENLYRCQVYARSSNQN
SCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQLQAHQRGHSRDKTYKWEVSDRIFNRNSGLHQR
VHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEK
PYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGM

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>70767_70767_2_PVR-ZNF233_PVR_chr19_45150842_ENST00000403059_ZNF233_chr19_44768467_ENST00000334152_length(amino acids)=767AA_BP=489
MELEEVGIPLPTPGTGGAAPRGFQDLSSGSWTRSDRGRASGRREARRRPREAQLLGATGMARAMAAAWPLLLVALLVLSWPPPGTGDVVV
QAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNY
TCLFVTFPQGSRSVDIWLRVLVLPSQDPALPQKEQEKMTKFQLLAIRLRLHLLDVVGDGDIQGCGCGLHQGGAGVAGPCPEKAVPRCDAG
ELQEPAVSGLSTLQTRCDITVGKRRQASDDGDRNPRRWVFRQRIAHQHDDHGVHKREKAFSHNNCGKDCVKESSQHSIIQSGEQTSDENG
KGLSVGSNLELHQQLHLRDKPHVNVEYGKGIGYSSGLPRHQCFHIGEKCYRNGDSGEGFSQGSHLQPHQRVSTGENLYRCQVYARSSNQN
SCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQLQAHQRGHSRDKTYKWEVSDRIFNRNSGLHQR
VHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEK
PYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGM

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>70767_70767_3_PVR-ZNF233_PVR_chr19_45150842_ENST00000406449_ZNF233_chr19_44768467_ENST00000334152_length(amino acids)=707AA_BP=430
MARAMAAAWPLLLVALLVLSWPPPGTGDVVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK
RLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLVLPSQDPALPQKEQEKMTKFQLLAIRLRLHLLDVVGDG
DIQGCGCGLHQGGAGVAGPCPEKAVPRCDAGELQEPAVSGLSTLQTRCDITVGKRRQASDDGDRNPRRWVFRQRIAHQHDDHGVHKREKA
FSHNNCGKDCVKESSQHSIIQSGEQTSDENGKGLSVGSNLELHQQLHLRDKPHVNVEYGKGIGYSSGLPRHQCFHIGEKCYRNGDSGEGF
SQGSHLQPHQRVSTGENLYRCQVYARSSNQNSCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQL
QAHQRGHSRDKTYKWEVSDRIFNRNSGLHQRVHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHT
GEKPYKCDTCGKDFSQISHLQAHQRVHKGEKPYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYK

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>70767_70767_4_PVR-ZNF233_PVR_chr19_45150842_ENST00000425690_ZNF233_chr19_44768467_ENST00000334152_length(amino acids)=767AA_BP=489
MELEEVGIPLPTPGTGGAAPRGFQDLSSGSWTRSDRGRASGRREARRRPREAQLLGATGMARAMAAAWPLLLVALLVLSWPPPGTGDVVV
QAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNY
TCLFVTFPQGSRSVDIWLRVLVLPSQDPALPQKEQEKMTKFQLLAIRLRLHLLDVVGDGDIQGCGCGLHQGGAGVAGPCPEKAVPRCDAG
ELQEPAVSGLSTLQTRCDITVGKRRQASDDGDRNPRRWVFRQRIAHQHDDHGVHKREKAFSHNNCGKDCVKESSQHSIIQSGEQTSDENG
KGLSVGSNLELHQQLHLRDKPHVNVEYGKGIGYSSGLPRHQCFHIGEKCYRNGDSGEGFSQGSHLQPHQRVSTGENLYRCQVYARSSNQN
SCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQLQAHQRGHSRDKTYKWEVSDRIFNRNSGLHQR
VHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEK
PYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGM

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