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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>71345_71345_1_RAB3D-MLLT1_RAB3D_chr19_11446122_ENST00000222120_MLLT1_chr19_6227113_ENST00000252674_length(amino acids)=523AA_BP=104
MWASISRSRPSTAMTRGSSCRSGTQRARSATAPSPRPTTGEPWASCSCMTSPIRNPLPLCRTGPRKSRPTPGTTPRSSWWGTSVTWRTNV
LCLLRMAGGSPTTLVMVMPEGADTVSRPSPDYPMLPTIPLSAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPRKDSESKSSSK
ELEREQAKSSKDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSK
GSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQN
HSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSSLPSREPPPPQKPPPPNSKVSGRRSPESCSKPEKIL

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>71345_71345_2_RAB3D-MLLT1_RAB3D_chr19_11446123_ENST00000222120_MLLT1_chr19_6227113_ENST00000252674_length(amino acids)=523AA_BP=104
MWASISRSRPSTAMTRGSSCRSGTQRARSATAPSPRPTTGEPWASCSCMTSPIRNPLPLCRTGPRKSRPTPGTTPRSSWWGTSVTWRTNV
LCLLRMAGGSPTTLVMVMPEGADTVSRPSPDYPMLPTIPLSAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPRKDSESKSSSK
ELEREQAKSSKDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSK
GSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQN
HSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSSLPSREPPPPQKPPPPNSKVSGRRSPESCSKPEKIL

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