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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>72291_72291_1_RARA-IGFBP4_RARA_chr17_38487648_ENST00000254066_IGFBP4_chr17_38609237_ENST00000269593_length(amino acids)=206AA_BP=1
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPANKDEGDHPNNSFSPCSAHDRRCLQKH
FAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK

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>72291_72291_2_RARA-IGFBP4_RARA_chr17_38487648_ENST00000254066_IGFBP4_chr17_38609237_ENST00000542955_length(amino acids)=206AA_BP=1
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPANKDEGDHPNNSFSPCSAHDRRCLQKH
FAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK

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>72291_72291_3_RARA-IGFBP4_RARA_chr17_38487648_ENST00000394089_IGFBP4_chr17_38609237_ENST00000269593_length(amino acids)=206AA_BP=1
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPANKDEGDHPNNSFSPCSAHDRRCLQKH
FAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK

--------------------------------------------------------------

>72291_72291_4_RARA-IGFBP4_RARA_chr17_38487648_ENST00000394089_IGFBP4_chr17_38609237_ENST00000542955_length(amino acids)=206AA_BP=1
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPANKDEGDHPNNSFSPCSAHDRRCLQKH
FAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK

--------------------------------------------------------------

>72291_72291_5_RARA-IGFBP4_RARA_chr17_38487648_ENST00000425707_IGFBP4_chr17_38609237_ENST00000269593_length(amino acids)=206AA_BP=1
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPANKDEGDHPNNSFSPCSAHDRRCLQKH
FAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK

--------------------------------------------------------------

>72291_72291_6_RARA-IGFBP4_RARA_chr17_38487648_ENST00000425707_IGFBP4_chr17_38609237_ENST00000542955_length(amino acids)=206AA_BP=1
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPANKDEGDHPNNSFSPCSAHDRRCLQKH
FAKIRDRSTSGGKMKVNGAPREDARPVPQGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK

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