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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>74088_74088_1_RILPL1-CDK4_RILPL1_chr12_123968727_ENST00000340724_CDK4_chr12_58142400_ENST00000257904_length(amino acids)=238AA_BP=
MSMSERERQVMKKLKEVVDKQRDEIRAKDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGS
LRAELGKLRERLQGEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYKRFPHETTS

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>74088_74088_2_RILPL1-CDK4_RILPL1_chr12_123968727_ENST00000376874_CDK4_chr12_58142400_ENST00000257904_length(amino acids)=390AA_BP=
MDLSSFLSCSTSRSSCRVNRGRLGSLRSMATFSASEMLSSPTGSVSGSSSPFWLCSPCSLSRNFPSSARRLPISCSLVCRSASSSTFCSI
RAFPWASTTVTRCRRSWLIFISRVCCCCKASTSSFFRPSSLSLARISSRCLSTTSFSFFITCRSRSDMPSCFWNSSSEKLTSLWERLVMS
CLFSSCSWAIWERRSCASPRHTSSTSSSSFWCLRSFSMRSILSRRRRSSSRRSSSSSGATWWRLTSTSRISRTRTTLGMRRAMASQPCWS
MTRSNSWPTSDAMSYTSMTVSSATFFSSADSAASADPRSSSMATLLACPPPRKLVQLPNLPLSRAGPAGPSLGRGRARSAGAGARAQRAA

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